RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 POTEDQ86YR6 584 aa17.84■□□□□ 0.45
NIPAL3-204ENST00000374399 CLEC4DQ8WXI8 215 aa17.84■□□□□ 0.45
NIPAL3-204ENST00000374399 ERCC4Q92889 916 aaPredicted RBP17.84■□□□□ 0.45
NIPAL3-204ENST00000374399 TSPY26PQ9H489 355 aa17.84■□□□□ 0.45
NIPAL3-204ENST00000374399 ELP3Q9H9T3 547 aa17.84■□□□□ 0.45
NIPAL3-204ENST00000374399 CSADQ9Y600 493 aa17.84■□□□□ 0.45
NIPAL3-204ENST00000374399 LAD1O00515 517 aa17.83■□□□□ 0.44
NIPAL3-204ENST00000374399 VWA5AO00534 786 aa17.83■□□□□ 0.44
NIPAL3-204ENST00000374399 CTAGE5O15320 804 aa17.83■□□□□ 0.44
NIPAL3-204ENST00000374399 NEMFO60524 1076 aa17.83■□□□□ 0.44
NIPAL3-204ENST00000374399 POTEEQ6S8J3 1075 aa17.83■□□□□ 0.44
NIPAL3-204ENST00000374399 CATSPERGQ6ZRH7 1159 aa17.83■□□□□ 0.44
NIPAL3-204ENST00000374399 ANKRD13AQ8IZ07 590 aa17.83■□□□□ 0.44
NIPAL3-204ENST00000374399 ATG4CQ96DT6 458 aa17.83■□□□□ 0.44
NIPAL3-204ENST00000374399 MBOAT7Q96N66 472 aa17.83■□□□□ 0.44
NIPAL3-204ENST00000374399 RRAGCQ9HB90 399 aa17.83■□□□□ 0.44
NIPAL3-204ENST00000374399 ABCB11O95342 1321 aa17.82■□□□□ 0.44
NIPAL3-204ENST00000374399 OR52Z1P0C646 297 aa17.82■□□□□ 0.44
NIPAL3-204ENST00000374399 DSG3P32926 999 aa17.82■□□□□ 0.44
NIPAL3-204ENST00000374399 TRAF1Q13077 416 aa17.82■□□□□ 0.44
NIPAL3-204ENST00000374399 LDLRAD1Q5T700 205 aa17.82■□□□□ 0.44
NIPAL3-204ENST00000374399 KRBA2Q6ZNG9 492 aa17.82■□□□□ 0.44
NIPAL3-204ENST00000374399 PANK2Q9BZ23 570 aa17.82■□□□□ 0.44
NIPAL3-204ENST00000374399 RAVER2Q9HCJ3 691 aaKnown RBP17.82■□□□□ 0.44
NIPAL3-204ENST00000374399 FAM13BQ9NYF5 915 aa17.82■□□□□ 0.44
NIPAL3-204ENST00000374399 MRPL11Q9Y3B7 192 aaKnown RBP17.82■□□□□ 0.44
NIPAL3-204ENST00000374399 CYP3A7-CYP3A51PA0A087WV96 503 aa17.81■□□□□ 0.44
NIPAL3-204ENST00000374399 SPDYE5A6NIY4 337 aa17.81■□□□□ 0.44
NIPAL3-204ENST00000374399 IRF6O14896 467 aa17.81■□□□□ 0.44
NIPAL3-204ENST00000374399 POLR2DO15514 142 aaKnown RBP17.81■□□□□ 0.44
NIPAL3-204ENST00000374399 ACTN4O43707 911 aaKnown RBP17.81■□□□□ 0.44
NIPAL3-204ENST00000374399 CYP3A7P24462 503 aa17.81■□□□□ 0.44
NIPAL3-204ENST00000374399 NF2P35240 595 aa17.81■□□□□ 0.44
NIPAL3-204ENST00000374399 SREBF1P36956 1147 aa17.81■□□□□ 0.44
NIPAL3-204ENST00000374399 MDM2Q00987 491 aaPredicted RBP17.81■□□□□ 0.44
NIPAL3-204ENST00000374399 GHRHRQ02643 423 aa17.81■□□□□ 0.44
NIPAL3-204ENST00000374399 PPATQ06203 517 aa17.81■□□□□ 0.44
NIPAL3-204ENST00000374399 TREML2Q5T2D2 321 aa17.81■□□□□ 0.44
NIPAL3-204ENST00000374399 TEX2Q8IWB9 1127 aa17.81■□□□□ 0.44
NIPAL3-204ENST00000374399 RBM46Q8TBY0 533 aaKnown RBP17.81■□□□□ 0.44
NIPAL3-204ENST00000374399 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.81■□□□□ 0.44
NIPAL3-204ENST00000374399 CCPG1Q9ULG6 757 aa17.81■□□□□ 0.44
NIPAL3-204ENST00000374399 RBBP6Q7Z6E9 1792 aaKnown RBP17.81■□□□□ 0.44
NIPAL3-204ENST00000374399 FOXN1O15353 648 aa17.81■□□□□ 0.44
NIPAL3-204ENST00000374399 CDC25AP30304 524 aa17.81■□□□□ 0.44
NIPAL3-204ENST00000374399 LONP1P36776 959 aaKnown RBP17.81■□□□□ 0.44
NIPAL3-204ENST00000374399 MRE11P49959 708 aa17.81■□□□□ 0.44
NIPAL3-204ENST00000374399 USP11P51784 963 aa17.81■□□□□ 0.44
NIPAL3-204ENST00000374399 ARHGAP4P98171 946 aa17.81■□□□□ 0.44
NIPAL3-204ENST00000374399 TYRO3Q06418 890 aa17.81■□□□□ 0.44
NIPAL3-204ENST00000374399 E2F4Q16254 413 aa17.81■□□□□ 0.44
NIPAL3-204ENST00000374399 DTHD1Q6ZMT9 781 aa17.81■□□□□ 0.44
NIPAL3-204ENST00000374399 ERO1BQ86YB8 467 aa17.81■□□□□ 0.44
NIPAL3-204ENST00000374399 CPXCR1Q8N123 301 aa17.81■□□□□ 0.44
NIPAL3-204ENST00000374399 HAS1Q92839 578 aa17.81■□□□□ 0.44
NIPAL3-204ENST00000374399 CLEC11AQ9Y240 323 aa17.81■□□□□ 0.44
NIPAL3-204ENST00000374399 A0A0G2JMZ2 1700 aa17.8■□□□□ 0.44
NIPAL3-204ENST00000374399 A0A087WWV3 80 aa17.8■□□□□ 0.44
NIPAL3-204ENST00000374399 A0A0G2JLL6 359 aaPredicted RBP17.8■□□□□ 0.44
NIPAL3-204ENST00000374399 PP2D1A8MPX8 630 aa17.8■□□□□ 0.44
NIPAL3-204ENST00000374399 NFIBO00712 420 aa17.8■□□□□ 0.44
NIPAL3-204ENST00000374399 CFBP00751 764 aa17.8■□□□□ 0.44
NIPAL3-204ENST00000374399 FOSP01100 380 aaPredicted RBP17.8■□□□□ 0.44
NIPAL3-204ENST00000374399 HSD17B4P51659 736 aa17.8■□□□□ 0.44
NIPAL3-204ENST00000374399 MOGSQ13724 837 aa17.8■□□□□ 0.44
NIPAL3-204ENST00000374399 MUM1L1Q5H9M0 696 aa17.8■□□□□ 0.44
NIPAL3-204ENST00000374399 MCTP2Q6DN12 878 aa17.8■□□□□ 0.44
NIPAL3-204ENST00000374399 PRRT2Q7Z6L0 340 aaPredicted RBP17.8■□□□□ 0.44
NIPAL3-204ENST00000374399 ELOA2Q8IYF1 753 aaPredicted RBP17.8■□□□□ 0.44
NIPAL3-204ENST00000374399 PDILTQ8N807 584 aa17.8■□□□□ 0.44
NIPAL3-204ENST00000374399 OTUD5Q96G74 571 aa17.8■□□□□ 0.44
NIPAL3-204ENST00000374399 SDF4Q9BRK5 362 aa17.8■□□□□ 0.44
NIPAL3-204ENST00000374399 TMOD4Q9NZQ9 345 aa17.8■□□□□ 0.44
NIPAL3-204ENST00000374399 COL20A1Q9P218 1284 aa17.8■□□□□ 0.44
NIPAL3-204ENST00000374399 SERTAD1Q9UHV2 236 aa17.8■□□□□ 0.44
NIPAL3-204ENST00000374399 RIPK3Q9Y572 518 aa17.8■□□□□ 0.44
NIPAL3-204ENST00000374399 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.79■□□□□ 0.44
NIPAL3-204ENST00000374399 GCOM1H8Y6P7 765 aaPredicted RBP17.79■□□□□ 0.44
NIPAL3-204ENST00000374399 POLR2MP0CAP2 368 aa17.79■□□□□ 0.44
NIPAL3-204ENST00000374399 GJA5P36382 358 aa17.79■□□□□ 0.44
NIPAL3-204ENST00000374399 COG2Q14746 738 aa17.79■□□□□ 0.44
NIPAL3-204ENST00000374399 MOXD1Q6UVY6 613 aa17.79■□□□□ 0.44
NIPAL3-204ENST00000374399 LENG9Q96B70 501 aa17.79■□□□□ 0.44
NIPAL3-204ENST00000374399 KIAA1468Q9P260 1216 aa17.79■□□□□ 0.44
NIPAL3-204ENST00000374399 ZNF214Q9UL59 606 aaPredicted RBP17.79■□□□□ 0.44
NIPAL3-204ENST00000374399 KCNH4Q9UQ05 1017 aa17.79■□□□□ 0.44
NIPAL3-204ENST00000374399 SPDYE3A6NKU9 549 aa17.78■□□□□ 0.44
NIPAL3-204ENST00000374399 SPDYE16A6NNV3 312 aaPredicted RBP17.78■□□□□ 0.44
NIPAL3-204ENST00000374399 CCDC192P0DO97 292 aa17.78■□□□□ 0.44
NIPAL3-204ENST00000374399 FDX1P10109 184 aa17.78■□□□□ 0.44
NIPAL3-204ENST00000374399 GCFC2P16383 781 aaKnown RBP17.78■□□□□ 0.44
NIPAL3-204ENST00000374399 CIITAP33076 1130 aa17.78■□□□□ 0.44
NIPAL3-204ENST00000374399 TTLL12Q14166 644 aaPredicted RBP17.78■□□□□ 0.44
NIPAL3-204ENST00000374399 CALCRLQ16602 461 aa17.78■□□□□ 0.44
NIPAL3-204ENST00000374399 IGSF22Q8N9C0 903 aa17.78■□□□□ 0.44
NIPAL3-204ENST00000374399 LRRC15Q8TF66 581 aa17.78■□□□□ 0.44
NIPAL3-204ENST00000374399 GJA10Q969M2 543 aa17.78■□□□□ 0.44
NIPAL3-204ENST00000374399 DDX25Q9UHL0 483 aaKnown RBP17.78■□□□□ 0.44
NIPAL3-204ENST00000374399 FAM86B1E9PN63 330 aa17.78■□□□□ 0.44
NIPAL3-204ENST00000374399 ZBED4O75132 1171 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms