RNA–Protein interactions for RNA: ENST00000374043.6

PACSIN1-202, Transcript of protein kinase C and casein kinase substrate in neurons 1, humanhuman

TSL 1 (best) BASIC

Gene PACSIN1, Length 4,229 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1-202ENST00000374043 FBXO11Q86XK2 927 aa13.13□□□□□ -0.31
PACSIN1-202ENST00000374043 NEDD1Q8NHV4 660 aa13.13□□□□□ -0.31
PACSIN1-202ENST00000374043 CHP1Q99653 195 aa13.13□□□□□ -0.31
PACSIN1-202ENST00000374043 LRRC27Q9C0I9 530 aa13.13□□□□□ -0.31
PACSIN1-202ENST00000374043 ANAPC4Q9UJX5 808 aa13.13□□□□□ -0.31
PACSIN1-202ENST00000374043 DNM3Q9UQ16 869 aa13.13□□□□□ -0.31
PACSIN1-202ENST00000374043 CNTNAP4Q9C0A0 1308 aa13.13□□□□□ -0.31
PACSIN1-202ENST00000374043 E9PMD0 336 aa13.12□□□□□ -0.31
PACSIN1-202ENST00000374043 EEF2P13639 858 aaKnown RBP13.12□□□□□ -0.31
PACSIN1-202ENST00000374043 FAM26FQ5R3K3 315 aa13.12□□□□□ -0.31
PACSIN1-202ENST00000374043 ADGRF4Q8IZF3 695 aa13.12□□□□□ -0.31
PACSIN1-202ENST00000374043 MYOCDQ8IZQ8 938 aa13.12□□□□□ -0.31
PACSIN1-202ENST00000374043 CEP112Q8N8E3 955 aa13.12□□□□□ -0.31
PACSIN1-202ENST00000374043 MRPL44Q9H9J2 332 aaKnown RBP13.12□□□□□ -0.31
PACSIN1-202ENST00000374043 MYCT1Q8N699 235 aa13.12□□□□□ -0.31
PACSIN1-202ENST00000374043 IFT81Q8WYA0 676 aa13.12□□□□□ -0.31
PACSIN1-202ENST00000374043 COA1Q9GZY4 146 aa13.12□□□□□ -0.31
PACSIN1-202ENST00000374043 VPS18Q9P253 973 aa13.12□□□□□ -0.31
PACSIN1-202ENST00000374043 MAD2L2Q9UI95 211 aa13.12□□□□□ -0.31
PACSIN1-202ENST00000374043 RWDD2AQ9UIY3 292 aa13.12□□□□□ -0.31
PACSIN1-202ENST00000374043 SRGAP2O75044 1071 aa13.12□□□□□ -0.31
PACSIN1-202ENST00000374043 MFAP3LO75121 409 aa13.12□□□□□ -0.31
PACSIN1-202ENST00000374043 DPYDQ12882 1025 aa13.12□□□□□ -0.31
PACSIN1-202ENST00000374043 STK4Q13043 487 aa13.12□□□□□ -0.31
PACSIN1-202ENST00000374043 TNIP1Q15025 636 aa13.12□□□□□ -0.31
PACSIN1-202ENST00000374043 SLC10A5Q5PT55 438 aa13.12□□□□□ -0.31
PACSIN1-202ENST00000374043 ZNF384Q8TF68 577 aa13.12□□□□□ -0.31
PACSIN1-202ENST00000374043 CLIC2O15247 247 aa13.12□□□□□ -0.31
PACSIN1-202ENST00000374043 DNM2P50570 870 aa13.12□□□□□ -0.31
PACSIN1-202ENST00000374043 POLR2FP61218 127 aaKnown RBP13.12□□□□□ -0.31
PACSIN1-202ENST00000374043 ASPRV1Q53RT3 343 aa13.12□□□□□ -0.31
PACSIN1-202ENST00000374043 SLC30A10Q6XR72 485 aa13.12□□□□□ -0.31
PACSIN1-202ENST00000374043 LRRN4CLQ8ND94 238 aa13.12□□□□□ -0.31
PACSIN1-202ENST00000374043 IFIH1Q9BYX4 1025 aaKnown RBP13.12□□□□□ -0.31
PACSIN1-202ENST00000374043 STK32BQ9NY57 414 aa13.12□□□□□ -0.31
PACSIN1-202ENST00000374043 TRIM10Q9UDY6 481 aa13.12□□□□□ -0.31
PACSIN1-202ENST00000374043 TTC26A0AVF1 554 aa13.11□□□□□ -0.31
PACSIN1-202ENST00000374043 TMEM110-MUSTN1A8MSY1 372 aa13.11□□□□□ -0.31
PACSIN1-202ENST00000374043 ADAMTS3O15072 1205 aa13.11□□□□□ -0.31
PACSIN1-202ENST00000374043 CDC37Q16543 378 aaPredicted RBP13.11□□□□□ -0.31
PACSIN1-202ENST00000374043 LEKR1Q6ZMV7 388 aa13.11□□□□□ -0.31
PACSIN1-202ENST00000374043 FBXL16Q8N461 479 aa13.11□□□□□ -0.31
PACSIN1-202ENST00000374043 JDP2Q8WYK2 163 aa13.11□□□□□ -0.31
PACSIN1-202ENST00000374043 ST7Q9NRC1 585 aa13.11□□□□□ -0.31
PACSIN1-202ENST00000374043 KIF1AQ12756 1690 aa13.11□□□□□ -0.31
PACSIN1-202ENST00000374043 STXBP3O00186 592 aa13.11□□□□□ -0.31
PACSIN1-202ENST00000374043 CETN3O15182 167 aa13.11□□□□□ -0.31
PACSIN1-202ENST00000374043 KLK7P49862 253 aa13.11□□□□□ -0.31
PACSIN1-202ENST00000374043 SBK1Q52WX2 424 aa13.11□□□□□ -0.31
PACSIN1-202ENST00000374043 ARL6IP4Q66PJ3 421 aaKnown RBP13.11□□□□□ -0.31
PACSIN1-202ENST00000374043 TC2NQ8N9U0 490 aa13.11□□□□□ -0.31
PACSIN1-202ENST00000374043 DDX12PQ92771 950 aa13.11□□□□□ -0.31
PACSIN1-202ENST00000374043 LSM14BQ9BX40 385 aaKnown RBP13.11□□□□□ -0.31
PACSIN1-202ENST00000374043 ZBTB12Q9Y330 459 aaPredicted RBP13.11□□□□□ -0.31
PACSIN1-202ENST00000374043 PCDHAC2Q9Y5I4 1007 aa13.11□□□□□ -0.31
PACSIN1-202ENST00000374043 POTEB3A0JP26 581 aa13.11□□□□□ -0.31
PACSIN1-202ENST00000374043 POTECB2RU33 542 aa13.11□□□□□ -0.31
PACSIN1-202ENST00000374043 CYP2J2P51589 502 aa13.11□□□□□ -0.31
PACSIN1-202ENST00000374043 POTEBQ6S5H4 581 aa13.11□□□□□ -0.31
PACSIN1-202ENST00000374043 PIGOQ8TEQ8 1089 aa13.11□□□□□ -0.31
PACSIN1-202ENST00000374043 SH2D3AQ9BRG2 576 aa13.11□□□□□ -0.31
PACSIN1-202ENST00000374043 MTMR4Q9NYA4 1195 aa13.11□□□□□ -0.31
PACSIN1-202ENST00000374043 BCCIPQ9P287 314 aaKnown RBP eCLIP13.11□□□□□ -0.31
PACSIN1-202ENST00000374043 NPHP3-ACAD11A0A0J9YXS1 232 aa13.1□□□□□ -0.31
PACSIN1-202ENST00000374043 CYTH3O43739 400 aa13.1□□□□□ -0.31
PACSIN1-202ENST00000374043 CLCN6P51797 869 aa13.1□□□□□ -0.31
PACSIN1-202ENST00000374043 GALNT17Q6IS24 598 aa13.1□□□□□ -0.31
PACSIN1-202ENST00000374043 RAD9BQ6WBX8 426 aa13.1□□□□□ -0.31
PACSIN1-202ENST00000374043 CERS3Q8IU89 383 aa13.1□□□□□ -0.31
PACSIN1-202ENST00000374043 DHX37Q8IY37 1157 aaKnown RBP13.1□□□□□ -0.31
PACSIN1-202ENST00000374043 MTA3Q9BTC8 594 aa13.1□□□□□ -0.31
PACSIN1-202ENST00000374043 NPR1P16066 1061 aa13.1□□□□□ -0.31
PACSIN1-202ENST00000374043 IBSPP21815 317 aaPredicted RBP13.1□□□□□ -0.31
PACSIN1-202ENST00000374043 GYS2P54840 703 aa13.1□□□□□ -0.31
PACSIN1-202ENST00000374043 RCSD1Q6JBY9 416 aa13.1□□□□□ -0.31
PACSIN1-202ENST00000374043 ARHGEF10LQ9HCE6 1279 aa13.1□□□□□ -0.31
PACSIN1-202ENST00000374043 TFRCP02786 760 aaKnown RBP13.1□□□□□ -0.31
PACSIN1-202ENST00000374043 ALAS1P13196 640 aa13.1□□□□□ -0.31
PACSIN1-202ENST00000374043 QRICH1Q2TAL8 776 aa13.1□□□□□ -0.31
PACSIN1-202ENST00000374043 KRT26Q7Z3Y9 468 aa13.1□□□□□ -0.31
PACSIN1-202ENST00000374043 RGS22Q8NE09 1264 aa13.1□□□□□ -0.31
PACSIN1-202ENST00000374043 HDAC6Q9UBN7 1215 aa13.1□□□□□ -0.31
PACSIN1-202ENST00000374043 RCAN1P53805 252 aa13.09□□□□□ -0.31
PACSIN1-202ENST00000374043 ADAM9Q13443 819 aa13.09□□□□□ -0.31
PACSIN1-202ENST00000374043 IQCEQ6IPM2 695 aa13.09□□□□□ -0.31
PACSIN1-202ENST00000374043 CDC42EP5Q6NZY7 148 aa13.09□□□□□ -0.31
PACSIN1-202ENST00000374043 VPS36Q86VN1 386 aa13.09□□□□□ -0.31
PACSIN1-202ENST00000374043 SECISBP2LQ93073 1101 aaKnown RBP13.09□□□□□ -0.31
PACSIN1-202ENST00000374043 BCS1LQ9Y276 419 aa13.09□□□□□ -0.31
PACSIN1-202ENST00000374043 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.09□□□□□ -0.31
PACSIN1-202ENST00000374043 PNMA6FA0A0J9YX94 578 aa13.09□□□□□ -0.31
PACSIN1-202ENST00000374043 PDHBP11177 359 aa13.09□□□□□ -0.31
PACSIN1-202ENST00000374043 GPATCH4Q5T3I0 446 aaKnown RBP13.09□□□□□ -0.31
PACSIN1-202ENST00000374043 ANKRD40Q6AI12 368 aa13.09□□□□□ -0.31
PACSIN1-202ENST00000374043 AMNQ9BXJ7 453 aa13.09□□□□□ -0.31
PACSIN1-202ENST00000374043 RTFDC1Q9BY42 306 aaPredicted RBP13.09□□□□□ -0.31
PACSIN1-202ENST00000374043 GBP3Q9H0R5 595 aa13.09□□□□□ -0.31
PACSIN1-202ENST00000374043 POTEFA5A3E0 1075 aa13.09□□□□□ -0.31
PACSIN1-202ENST00000374043 ECE2O60344 883 aa13.09□□□□□ -0.31
PACSIN1-202ENST00000374043 POTEIP0CG38 1075 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms