RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 TMTC4Q5T4D3 741 aa15.68■□□□□ 0.1
TRAF1-201ENST00000373887 SKA2Q8WVK7 121 aaPredicted RBP15.68■□□□□ 0.1
TRAF1-201ENST00000373887 AKT3Q9Y243 479 aa15.68■□□□□ 0.1
TRAF1-201ENST00000373887 CIAPIN1Q6FI81 312 aa15.68■□□□□ 0.1
TRAF1-201ENST00000373887 CROCCP2Q86T23 111 aa15.68■□□□□ 0.1
TRAF1-201ENST00000373887 TMTC1Q8IUR5 882 aa15.68■□□□□ 0.1
TRAF1-201ENST00000373887 IFIH1Q9BYX4 1025 aaKnown RBP15.68■□□□□ 0.1
TRAF1-201ENST00000373887 BUB1O43683 1085 aa15.67■□□□□ 0.1
TRAF1-201ENST00000373887 PPFIA2O75334 1257 aa15.67■□□□□ 0.1
TRAF1-201ENST00000373887 USP17L8P0C7I0 530 aa15.67■□□□□ 0.1
TRAF1-201ENST00000373887 TTC19Q6DKK2 380 aaPredicted RBP15.67■□□□□ 0.1
TRAF1-201ENST00000373887 HAUS2Q9NVX0 235 aa15.67■□□□□ 0.1
TRAF1-201ENST00000373887 SYNJ2BP-COX16A0A087WUM0 186 aa15.67■□□□□ 0.1
TRAF1-201ENST00000373887 OATP04181 439 aa15.67■□□□□ 0.1
TRAF1-201ENST00000373887 RASSF2P50749 326 aa15.67■□□□□ 0.1
TRAF1-201ENST00000373887 ZBTB8OSQ8IWT0 167 aa15.67■□□□□ 0.1
TRAF1-201ENST00000373887 HINFPQ9BQA5 517 aa15.67■□□□□ 0.1
TRAF1-201ENST00000373887 TRIM56Q9BRZ2 755 aaKnown RBP15.67■□□□□ 0.1
TRAF1-201ENST00000373887 COX16Q9P0S2 106 aa15.67■□□□□ 0.1
TRAF1-201ENST00000373887 DBNLQ9UJU6 430 aaKnown RBP15.67■□□□□ 0.1
TRAF1-201ENST00000373887 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.67■□□□□ 0.1
TRAF1-201ENST00000373887 STK24Q9Y6E0 443 aa15.67■□□□□ 0.1
TRAF1-201ENST00000373887 ABCC4O15439 1325 aa15.67■□□□□ 0.1
TRAF1-201ENST00000373887 MAP2K2P36507 400 aa15.67■□□□□ 0.1
TRAF1-201ENST00000373887 PEX19P40855 299 aa15.67■□□□□ 0.1
TRAF1-201ENST00000373887 SUPT20HL1Q3ZLR7 823 aa15.67■□□□□ 0.1
TRAF1-201ENST00000373887 DPH5Q9H2P9 285 aa15.67■□□□□ 0.1
TRAF1-201ENST00000373887 BCAP29Q9UHQ4 241 aa15.67■□□□□ 0.1
TRAF1-201ENST00000373887 NFE2L3Q9Y4A8 694 aa15.67■□□□□ 0.1
TRAF1-201ENST00000373887 ADCY8P40145 1251 aa15.67■□□□□ 0.1
TRAF1-201ENST00000373887 ATL3Q6DD88 541 aa15.67■□□□□ 0.1
TRAF1-201ENST00000373887 BANK1Q8NDB2 785 aa15.67■□□□□ 0.1
TRAF1-201ENST00000373887 BBOX1O75936 387 aa15.67■□□□□ 0.1
TRAF1-201ENST00000373887 RAB17Q9H0T7 212 aa15.67■□□□□ 0.1
TRAF1-201ENST00000373887 RAB20Q9NX57 234 aa15.67■□□□□ 0.1
TRAF1-201ENST00000373887 AMFRQ9UKV5 643 aa15.67■□□□□ 0.1
TRAF1-201ENST00000373887 FAF1Q9UNN5 650 aaPredicted RBP15.67■□□□□ 0.1
TRAF1-201ENST00000373887 RNF168Q8IYW5 571 aaPredicted RBP15.66■□□□□ 0.1
TRAF1-201ENST00000373887 CFAP61Q8NHU2 1237 aa15.66■□□□□ 0.1
TRAF1-201ENST00000373887 P3H4Q92791 437 aa15.66■□□□□ 0.1
TRAF1-201ENST00000373887 KLHL14Q9P2G3 628 aa15.66■□□□□ 0.1
TRAF1-201ENST00000373887 BLMP54132 1417 aaPredicted RBP15.66■□□□□ 0.1
TRAF1-201ENST00000373887 KCNK3O14649 394 aa15.66■□□□□ 0.1
TRAF1-201ENST00000373887 LCORLQ8N3X6 602 aa15.66■□□□□ 0.1
TRAF1-201ENST00000373887 PLEKHF1Q96S99 279 aa15.66■□□□□ 0.1
TRAF1-201ENST00000373887 PIM2Q9P1W9 311 aa15.66■□□□□ 0.1
TRAF1-201ENST00000373887 ADGRL3Q9HAR2 1447 aa15.66■□□□□ 0.1
TRAF1-201ENST00000373887 ERVK-7P63135 1459 aa15.66■□□□□ 0.1
TRAF1-201ENST00000373887 USP17L3A6NCW0 530 aa15.66■□□□□ 0.1
TRAF1-201ENST00000373887 USP17L4A6NCW7 530 aa15.66■□□□□ 0.1
TRAF1-201ENST00000373887 SCG2P13521 617 aa15.66■□□□□ 0.1
TRAF1-201ENST00000373887 USP17L1Q7RTZ2 530 aa15.66■□□□□ 0.1
TRAF1-201ENST00000373887 TRIM50Q86XT4 487 aa15.66■□□□□ 0.1
TRAF1-201ENST00000373887 HECW2Q9P2P5 1572 aa15.66■□□□□ 0.1
TRAF1-201ENST00000373887 NPC1L1Q9UHC9 1359 aa15.66■□□□□ 0.1
TRAF1-201ENST00000373887 NKX1-1Q15270 411 aaPredicted RBP15.66■□□□□ 0.1
TRAF1-201ENST00000373887 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.66■□□□□ 0.1
TRAF1-201ENST00000373887 TARBP1Q13395 1621 aaKnown RBP15.66■□□□□ 0.1
TRAF1-201ENST00000373887 NR1I2O75469 434 aa15.66■□□□□ 0.1
TRAF1-201ENST00000373887 NPR1P16066 1061 aa15.66■□□□□ 0.1
TRAF1-201ENST00000373887 ATF7P17544 494 aaPredicted RBP15.66■□□□□ 0.1
TRAF1-201ENST00000373887 PHEXP78562 749 aa15.66■□□□□ 0.1
TRAF1-201ENST00000373887 AOC3Q16853 763 aa15.66■□□□□ 0.1
TRAF1-201ENST00000373887 SUDS3Q9H7L9 328 aaPredicted RBP15.66■□□□□ 0.1
TRAF1-201ENST00000373887 IGSF1Q8N6C5 1336 aa15.66■□□□□ 0.1
TRAF1-201ENST00000373887 MMEL1Q495T6 779 aa15.65■□□□□ 0.1
TRAF1-201ENST00000373887 PHLDB3Q6NSJ2 640 aa15.65■□□□□ 0.1
TRAF1-201ENST00000373887 HDAC11Q96DB2 347 aa15.65■□□□□ 0.1
TRAF1-201ENST00000373887 PANK4Q9NVE7 773 aa15.65■□□□□ 0.1
TRAF1-201ENST00000373887 PARP2Q9UGN5 583 aa15.65■□□□□ 0.1
TRAF1-201ENST00000373887 ESYT2A0FGR8 921 aa15.65■□□□□ 0.1
TRAF1-201ENST00000373887 A6NNZ2 444 aa15.65■□□□□ 0.1
TRAF1-201ENST00000373887 TUBB8Q3ZCM7 444 aa15.65■□□□□ 0.1
TRAF1-201ENST00000373887 SLC10A4Q96EP9 437 aa15.65■□□□□ 0.1
TRAF1-201ENST00000373887 SMYD2Q9NRG4 433 aa15.65■□□□□ 0.1
TRAF1-201ENST00000373887 MED23Q9ULK4 1368 aa15.65■□□□□ 0.1
TRAF1-201ENST00000373887 STAM2O75886 525 aa15.65■□□□□ 0.1
TRAF1-201ENST00000373887 KAZNQ674X7 775 aa15.65■□□□□ 0.1
TRAF1-201ENST00000373887 CC2D2BQ6DHV5 1058 aa15.65■□□□□ 0.1
TRAF1-201ENST00000373887 STAG1Q8WVM7 1258 aa15.65■□□□□ 0.1
TRAF1-201ENST00000373887 CLIC6Q96NY7 704 aa15.65■□□□□ 0.1
TRAF1-201ENST00000373887 AP5M1Q9H0R1 490 aa15.65■□□□□ 0.1
TRAF1-201ENST00000373887 SETD1BQ9UPS6 1966 aaKnown RBP15.65■□□□□ 0.1
TRAF1-201ENST00000373887 ZMYM6O95789 1325 aa15.65■□□□□ 0.1
TRAF1-201ENST00000373887 SEMA3EO15041 775 aa15.65■□□□□ 0.1
TRAF1-201ENST00000373887 MAP3K21Q5TCX8 1036 aa15.65■□□□□ 0.1
TRAF1-201ENST00000373887 NEK8Q86SG6 692 aa15.65■□□□□ 0.1
TRAF1-201ENST00000373887 MLKLQ8NB16 471 aa15.65■□□□□ 0.1
TRAF1-201ENST00000373887 TSKSQ9UJT2 592 aa15.65■□□□□ 0.1
TRAF1-201ENST00000373887 PPFIA4O75335 1185 aa15.65■□□□□ 0.1
TRAF1-201ENST00000373887 PPP2R5BQ15173 497 aa15.65■□□□□ 0.1
TRAF1-201ENST00000373887 BAG5Q9UL15 447 aa15.65■□□□□ 0.1
TRAF1-201ENST00000373887 TPCN1Q9ULQ1 816 aa15.65■□□□□ 0.1
TRAF1-201ENST00000373887 HEG1Q9ULI3 1381 aa15.65■□□□□ 0.1
TRAF1-201ENST00000373887 KRIT1O00522 736 aa15.64■□□□□ 0.1
TRAF1-201ENST00000373887 PHBP35232 272 aa15.64■□□□□ 0.1
TRAF1-201ENST00000373887 CCDC127Q96BQ5 260 aa15.64■□□□□ 0.1
TRAF1-201ENST00000373887 PRKAG2Q9UGJ0 569 aa15.64■□□□□ 0.1
TRAF1-201ENST00000373887 ARHGEF5Q12774 1597 aa15.64■□□□□ 0.09
TRAF1-201ENST00000373887 CCNA1P78396 465 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms