RNA–Protein interactions for RNA: ENST00000373568.6

HDAC8-205, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 1,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-205ENST00000373568 KATNBL1Q9H079 304 aa15.27■□□□□ 0.04
HDAC8-205ENST00000373568 ALDH8A1Q9H2A2 487 aaPredicted RBP15.27■□□□□ 0.04
HDAC8-205ENST00000373568 COL20A1Q9P218 1284 aa15.27■□□□□ 0.04
HDAC8-205ENST00000373568 NRBP1Q9UHY1 535 aa15.27■□□□□ 0.04
HDAC8-205ENST00000373568 SGPL1O95470 568 aa15.26■□□□□ 0.03
HDAC8-205ENST00000373568 ZNF865P0CJ78 1059 aaPredicted RBP15.26■□□□□ 0.03
HDAC8-205ENST00000373568 PDIA3P30101 505 aaKnown RBP15.26■□□□□ 0.03
HDAC8-205ENST00000373568 PRAMEF19Q5SWL8 479 aa15.26■□□□□ 0.03
HDAC8-205ENST00000373568 LHX8Q68G74 356 aa15.26■□□□□ 0.03
HDAC8-205ENST00000373568 MORC4Q8TE76 937 aa15.26■□□□□ 0.03
HDAC8-205ENST00000373568 KIF2CQ99661 725 aa15.26■□□□□ 0.03
HDAC8-205ENST00000373568 PDRG1Q9NUG6 133 aa15.26■□□□□ 0.03
HDAC8-205ENST00000373568 MRPL11Q9Y3B7 192 aaKnown RBP15.26■□□□□ 0.03
HDAC8-205ENST00000373568 PCDHA1Q9Y5I3 950 aa15.26■□□□□ 0.03
HDAC8-205ENST00000373568 DDX49Q9Y6V7 483 aaKnown RBP15.26■□□□□ 0.03
HDAC8-205ENST00000373568 PTPDC1A2A3K4 754 aa15.25■□□□□ 0.03
HDAC8-205ENST00000373568 ADD1P35611 737 aaKnown RBP15.25■□□□□ 0.03
HDAC8-205ENST00000373568 METAP2P50579 478 aaKnown RBP eCLIP15.25■□□□□ 0.03
HDAC8-205ENST00000373568 HSD17B4P51659 736 aa15.25■□□□□ 0.03
HDAC8-205ENST00000373568 PPP2R5BQ15173 497 aa15.25■□□□□ 0.03
HDAC8-205ENST00000373568 NTRK3Q16288 839 aa15.25■□□□□ 0.03
HDAC8-205ENST00000373568 ARMCX2Q7L311 632 aa15.25■□□□□ 0.03
HDAC8-205ENST00000373568 SYTL5Q8TDW5 730 aaPredicted RBP15.25■□□□□ 0.03
HDAC8-205ENST00000373568 PIBF1Q8WXW3 757 aa15.25■□□□□ 0.03
HDAC8-205ENST00000373568 RRP36Q96EU6 259 aaKnown RBP15.25■□□□□ 0.03
HDAC8-205ENST00000373568 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.25■□□□□ 0.03
HDAC8-205ENST00000373568 LOC102724159A0A0B4J2E5 919 aa15.24■□□□□ 0.03
HDAC8-205ENST00000373568 hCG_1642624A0A1W2PR95 340 aa15.24■□□□□ 0.03
HDAC8-205ENST00000373568 SEPT4O43236 478 aa15.24■□□□□ 0.03
HDAC8-205ENST00000373568 EDNRBP24530 442 aa15.24■□□□□ 0.03
HDAC8-205ENST00000373568 CALML3P27482 149 aa15.24■□□□□ 0.03
HDAC8-205ENST00000373568 RBM25P49756 843 aaKnown RBP15.24■□□□□ 0.03
HDAC8-205ENST00000373568 MNX1P50219 401 aaPredicted RBP15.24■□□□□ 0.03
HDAC8-205ENST00000373568 ALDH5A1P51649 535 aaPredicted RBP15.24■□□□□ 0.03
HDAC8-205ENST00000373568 PWP2Q15269 919 aaKnown RBP15.24■□□□□ 0.03
HDAC8-205ENST00000373568 UBE2Q1Q7Z7E8 422 aa15.24■□□□□ 0.03
HDAC8-205ENST00000373568 MCF2L2Q86YR7 1114 aa15.24■□□□□ 0.03
HDAC8-205ENST00000373568 CCDC82Q8N4S0 544 aa15.24■□□□□ 0.03
HDAC8-205ENST00000373568 ZNF274Q96GC6 653 aaPredicted RBP15.24■□□□□ 0.03
HDAC8-205ENST00000373568 LARP6Q9BRS8 491 aaKnown RBP15.24■□□□□ 0.03
HDAC8-205ENST00000373568 DDX20Q9UHI6 824 aaKnown RBP15.24■□□□□ 0.03
HDAC8-205ENST00000373568 OGDHLQ9ULD0 1010 aa15.24■□□□□ 0.03
HDAC8-205ENST00000373568 AK2P54819 239 aa15.23■□□□□ 0.03
HDAC8-205ENST00000373568 TRAF1Q13077 416 aa15.23■□□□□ 0.03
HDAC8-205ENST00000373568 SEC63Q9UGP8 760 aaKnown RBP15.23■□□□□ 0.03
HDAC8-205ENST00000373568 KIAA1217Q5T5P2 1943 aa15.22■□□□□ 0.03
HDAC8-205ENST00000373568 ASB14A6NK59 587 aa15.22■□□□□ 0.03
HDAC8-205ENST00000373568 ADCY6O43306 1168 aa15.22■□□□□ 0.03
HDAC8-205ENST00000373568 TYW1BQ6NUM6 668 aa15.22■□□□□ 0.03
HDAC8-205ENST00000373568 SAMD3Q8N6K7 520 aa15.22■□□□□ 0.03
HDAC8-205ENST00000373568 DNERQ8NFT8 737 aa15.22■□□□□ 0.03
HDAC8-205ENST00000373568 TAAR1Q96RJ0 339 aa15.22■□□□□ 0.03
HDAC8-205ENST00000373568 C22orf23Q9BZE7 217 aa15.22■□□□□ 0.03
HDAC8-205ENST00000373568 ABHD16BQ9H3Z7 469 aa15.22■□□□□ 0.03
HDAC8-205ENST00000373568 NCOA5Q9HCD5 579 aaKnown RBP15.22■□□□□ 0.03
HDAC8-205ENST00000373568 MAP3K20Q9NYL2 800 aaKnown RBP15.22■□□□□ 0.03
HDAC8-205ENST00000373568 ADD3Q9UEY8 706 aaKnown RBP15.22■□□□□ 0.03
HDAC8-205ENST00000373568 TPCN1Q9ULQ1 816 aa15.22■□□□□ 0.03
HDAC8-205ENST00000373568 NAP1L2Q9ULW6 460 aaPredicted RBP15.22■□□□□ 0.03
HDAC8-205ENST00000373568 CNPY2Q9Y2B0 182 aa15.22■□□□□ 0.03
HDAC8-205ENST00000373568 MKI67P46013 3256 aaKnown RBP15.22■□□□□ 0.03
HDAC8-205ENST00000373568 CCDC196A0A1B0GTZ2 297 aa15.21■□□□□ 0.03
HDAC8-205ENST00000373568 MSCO60682 206 aa15.21■□□□□ 0.03
HDAC8-205ENST00000373568 CFBP00751 764 aa15.21■□□□□ 0.03
HDAC8-205ENST00000373568 IFNAR1P17181 557 aa15.21■□□□□ 0.03
HDAC8-205ENST00000373568 CAPN2P17655 700 aa15.21■□□□□ 0.03
HDAC8-205ENST00000373568 CNGA1P29973 690 aa15.21■□□□□ 0.03
HDAC8-205ENST00000373568 CCT2P78371 535 aaKnown RBP15.21■□□□□ 0.03
HDAC8-205ENST00000373568 ACVR2BQ13705 512 aa15.21■□□□□ 0.03
HDAC8-205ENST00000373568 WWC2Q6AWC2 1192 aa15.21■□□□□ 0.03
HDAC8-205ENST00000373568 GPKOWQ92917 476 aaPredicted RBP eCLIP15.21■□□□□ 0.031e-19■■■■■ 59.4
HDAC8-205ENST00000373568 ZHX1Q9UKY1 873 aaPredicted RBP15.21■□□□□ 0.03
HDAC8-205ENST00000373568 V9GY48 417 aaPredicted RBP15.21■□□□□ 0.03
HDAC8-205ENST00000373568 ALPK3Q96L96 1907 aa15.21■□□□□ 0.02
HDAC8-205ENST00000373568 FRMPD4Q14CM0 1322 aa15.2■□□□□ 0.02
HDAC8-205ENST00000373568 TNRC18O15417 2968 aaPredicted RBP15.2■□□□□ 0.02
HDAC8-205ENST00000373568 MEIS2O14770 477 aa15.2■□□□□ 0.02
HDAC8-205ENST00000373568 AKR1A1P14550 325 aa15.2■□□□□ 0.02
HDAC8-205ENST00000373568 HOXA13P31271 388 aaPredicted RBP15.2■□□□□ 0.02
HDAC8-205ENST00000373568 NEK4P51957 841 aa15.2■□□□□ 0.02
HDAC8-205ENST00000373568 PKN1Q16512 942 aa15.2■□□□□ 0.02
HDAC8-205ENST00000373568 ANO1Q5XXA6 986 aa15.2■□□□□ 0.02
HDAC8-205ENST00000373568 TAPT1Q6NXT6 567 aa15.2■□□□□ 0.02
HDAC8-205ENST00000373568 ANKLE1Q8NAG6 615 aa15.2■□□□□ 0.02
HDAC8-205ENST00000373568 LENG1Q96BZ8 264 aaPredicted RBP15.2■□□□□ 0.02
HDAC8-205ENST00000373568 GCOM1H8Y6P7 765 aaPredicted RBP15.19■□□□□ 0.02
HDAC8-205ENST00000373568 STXBP3O00186 592 aa15.19■□□□□ 0.02
HDAC8-205ENST00000373568 PIK3CDO00329 1044 aa15.19■□□□□ 0.02
HDAC8-205ENST00000373568 PRPF3O43395 683 aaKnown RBP15.19■□□□□ 0.02
HDAC8-205ENST00000373568 PFKFB2O60825 505 aa15.19■□□□□ 0.02
HDAC8-205ENST00000373568 LARGE1O95461 756 aa15.19■□□□□ 0.02
HDAC8-205ENST00000373568 TFRCP02786 760 aaKnown RBP15.19■□□□□ 0.02
HDAC8-205ENST00000373568 POLR2MP0CAP2 368 aa15.19■□□□□ 0.02
HDAC8-205ENST00000373568 SCRN1Q12765 414 aa15.19■□□□□ 0.02
HDAC8-205ENST00000373568 PFKFB3Q16875 520 aaPredicted RBP15.19■□□□□ 0.02
HDAC8-205ENST00000373568 CCDC144BQ3MJ40 725 aa15.19■□□□□ 0.02
HDAC8-205ENST00000373568 PPP1R18Q6NYC8 613 aa15.19■□□□□ 0.02
HDAC8-205ENST00000373568 HEATR3Q7Z4Q2 680 aa15.19■□□□□ 0.02
HDAC8-205ENST00000373568 FBXO16Q8IX29 292 aaPredicted RBP15.19■□□□□ 0.02
HDAC8-205ENST00000373568 DIS3LQ8TF46 1054 aaKnown RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms