RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 TMEM179Q6ZVK1 233 aa14.91□□□□□ -0.02
HDAC8-204ENST00000373560 DYNLL2Q96FJ2 89 aa14.91□□□□□ -0.02
HDAC8-204ENST00000373560 DBNDD2Q9BQY9 259 aa14.91□□□□□ -0.02
HDAC8-204ENST00000373560 TMEM121BQ9BXQ6 578 aaPredicted RBP14.91□□□□□ -0.02
HDAC8-204ENST00000373560 TLR9Q9NR96 1032 aa14.91□□□□□ -0.02
HDAC8-204ENST00000373560 DMXL1Q9Y485 3027 aa14.9□□□□□ -0.02
HDAC8-204ENST00000373560 PRR23AA6NEV1 266 aa14.9□□□□□ -0.02
HDAC8-204ENST00000373560 DLX2Q07687 328 aaPredicted RBP14.9□□□□□ -0.02
HDAC8-204ENST00000373560 COL19A1Q14993 1142 aa14.9□□□□□ -0.02
HDAC8-204ENST00000373560 MAGEB6Q8N7X4 407 aa14.9□□□□□ -0.02
HDAC8-204ENST00000373560 PABPC5Q96DU9 382 aaKnown RBP14.9□□□□□ -0.02
HDAC8-204ENST00000373560 TEX13BQ9BXU2 312 aa14.9□□□□□ -0.02
HDAC8-204ENST00000373560 ARHGEF10LQ9HCE6 1279 aa14.9□□□□□ -0.02
HDAC8-204ENST00000373560 FAM186AA6NE01 2351 aa14.9□□□□□ -0.02
HDAC8-204ENST00000373560 GREB1LQ9C091 1923 aaPredicted RBP14.9□□□□□ -0.02
HDAC8-204ENST00000373560 SRGAP3O43295 1099 aa14.89□□□□□ -0.03
HDAC8-204ENST00000373560 RFC2P35250 354 aa14.89□□□□□ -0.03
HDAC8-204ENST00000373560 COPB2P35606 906 aa14.89□□□□□ -0.03
HDAC8-204ENST00000373560 KCNJ6P48051 423 aa14.89□□□□□ -0.03
HDAC8-204ENST00000373560 TTC39AQ5SRH9 613 aa14.89□□□□□ -0.03
HDAC8-204ENST00000373560 SUGP1Q8IWZ8 645 aaKnown RBP14.89□□□□□ -0.03
HDAC8-204ENST00000373560 FBXL6Q8N531 539 aa14.89□□□□□ -0.03
HDAC8-204ENST00000373560 MRPL38Q96DV4 380 aaKnown RBP14.89□□□□□ -0.03
HDAC8-204ENST00000373560 RIOK1Q9BRS2 568 aaKnown RBP14.89□□□□□ -0.03
HDAC8-204ENST00000373560 ZBED2Q9BTP6 218 aa14.89□□□□□ -0.03
HDAC8-204ENST00000373560 UPF3BQ9BZI7 483 aaKnown RBP14.89□□□□□ -0.03
HDAC8-204ENST00000373560 EPG5Q9HCE0 2579 aa14.89□□□□□ -0.03
HDAC8-204ENST00000373560 MYO7AQ13402 2215 aa14.89□□□□□ -0.03
HDAC8-204ENST00000373560 IDH1O75874 414 aaKnown RBP14.88□□□□□ -0.03
HDAC8-204ENST00000373560 BAIAP3O94812 1187 aa14.88□□□□□ -0.03
HDAC8-204ENST00000373560 GJB5O95377 273 aa14.88□□□□□ -0.03
HDAC8-204ENST00000373560 POLR3DP05423 398 aaPredicted RBP14.88□□□□□ -0.03
HDAC8-204ENST00000373560 SMAD2Q15796 467 aaKnown RBP14.88□□□□□ -0.03
HDAC8-204ENST00000373560 RPAINQ86UA6 219 aa14.88□□□□□ -0.03
HDAC8-204ENST00000373560 FBXO16Q8IX29 292 aaPredicted RBP14.88□□□□□ -0.03
HDAC8-204ENST00000373560 CPXCR1Q8N123 301 aa14.88□□□□□ -0.03
HDAC8-204ENST00000373560 PRRX2Q99811 253 aa14.88□□□□□ -0.03
HDAC8-204ENST00000373560 CLDND1Q9NY35 253 aa14.88□□□□□ -0.03
HDAC8-204ENST00000373560 RIF1Q5UIP0 2472 aaKnown RBP14.87□□□□□ -0.03
HDAC8-204ENST00000373560 PROB1E7EW31 1015 aa14.87□□□□□ -0.03
HDAC8-204ENST00000373560 MBTPS2O43462 519 aa14.87□□□□□ -0.03
HDAC8-204ENST00000373560 RAD21O60216 631 aa14.87□□□□□ -0.03
HDAC8-204ENST00000373560 EEF2P13639 858 aaKnown RBP14.87□□□□□ -0.03
HDAC8-204ENST00000373560 EEPD1Q7L9B9 569 aa14.87□□□□□ -0.03
HDAC8-204ENST00000373560 BANK1Q8NDB2 785 aa14.87□□□□□ -0.03
HDAC8-204ENST00000373560 FSD1Q9BTV5 496 aa14.87□□□□□ -0.03
HDAC8-204ENST00000373560 AP5M1Q9H0R1 490 aa14.87□□□□□ -0.03
HDAC8-204ENST00000373560 ANTXR1Q9H6X2 564 aa14.87□□□□□ -0.03
HDAC8-204ENST00000373560 RAVER2Q9HCJ3 691 aaKnown RBP14.87□□□□□ -0.03
HDAC8-204ENST00000373560 TLR7Q9NYK1 1049 aaKnown RBP14.87□□□□□ -0.03
HDAC8-204ENST00000373560 ZXDAP98168 799 aa14.86□□□□□ -0.03
HDAC8-204ENST00000373560 TAPT1Q6NXT6 567 aa14.86□□□□□ -0.03
HDAC8-204ENST00000373560 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.86□□□□□ -0.03
HDAC8-204ENST00000373560 ANKRD35Q8N283 1001 aa14.86□□□□□ -0.03
HDAC8-204ENST00000373560 SDR42E1Q8WUS8 393 aa14.86□□□□□ -0.03
HDAC8-204ENST00000373560 CTAGE1Q96RT6 745 aa14.86□□□□□ -0.03
HDAC8-204ENST00000373560 RAD9AQ99638 391 aa14.86□□□□□ -0.03
HDAC8-204ENST00000373560 MCM9Q9NXL9 1143 aa14.86□□□□□ -0.03
HDAC8-204ENST00000373560 GVINP1Q7Z2Y8 2422 aa14.86□□□□□ -0.03
HDAC8-204ENST00000373560 CACNA1GO43497 2377 aa14.85□□□□□ -0.03
HDAC8-204ENST00000373560 MICAL3Q7RTP6 2002 aa14.85□□□□□ -0.03
HDAC8-204ENST00000373560 TBX10O75333 385 aa14.85□□□□□ -0.03
HDAC8-204ENST00000373560 PDGFBP01127 241 aaPredicted RBP14.85□□□□□ -0.03
HDAC8-204ENST00000373560 SUPT20HL2P0C7V6 817 aa14.85□□□□□ -0.03
HDAC8-204ENST00000373560 PURAQ00577 322 aaKnown RBP14.85□□□□□ -0.03
HDAC8-204ENST00000373560 NBPF20Q3BBV1 942 aa14.85□□□□□ -0.03
HDAC8-204ENST00000373560 TIGD5Q53EQ6 642 aa14.85□□□□□ -0.03
HDAC8-204ENST00000373560 FAM47CQ5HY64 1035 aa14.85□□□□□ -0.03
HDAC8-204ENST00000373560 FAM133AQ8N9E0 248 aa14.85□□□□□ -0.03
HDAC8-204ENST00000373560 ASIC4Q96FT7 647 aa14.85□□□□□ -0.03
HDAC8-204ENST00000373560 CNTNAP3BQ96NU0 1288 aa14.85□□□□□ -0.03
HDAC8-204ENST00000373560 SLF1Q9BQI6 1058 aa14.85□□□□□ -0.03
HDAC8-204ENST00000373560 SEZ6LQ9BYH1 1024 aa14.85□□□□□ -0.03
HDAC8-204ENST00000373560 CNTNAP3Q9BZ76 1288 aa14.85□□□□□ -0.03
HDAC8-204ENST00000373560 NCOR2Q9Y618 2525 aa14.84□□□□□ -0.03
HDAC8-204ENST00000373560 CYP2D7A0A087X1C5 515 aa14.84□□□□□ -0.03
HDAC8-204ENST00000373560 ZEB2O60315 1214 aa14.84□□□□□ -0.03
HDAC8-204ENST00000373560 MYL3P08590 195 aa14.84□□□□□ -0.03
HDAC8-204ENST00000373560 AVPR2P30518 371 aa14.84□□□□□ -0.03
HDAC8-204ENST00000373560 GTF2F1P35269 517 aaKnown RBP eCLIP14.84□□□□□ -0.03
HDAC8-204ENST00000373560 DHX38Q92620 1227 aaKnown RBP14.84□□□□□ -0.03
HDAC8-204ENST00000373560 SH2D4AQ9H788 454 aa14.84□□□□□ -0.03
HDAC8-204ENST00000373560 HOMER2Q9NSB8 354 aa14.84□□□□□ -0.03
HDAC8-204ENST00000373560 FAM50BQ9Y247 325 aa14.84□□□□□ -0.03
HDAC8-204ENST00000373560 RALGAPA2Q2PPJ7 1873 aa14.84□□□□□ -0.03
HDAC8-204ENST00000373560 PNMA6EA0A0J9YXQ4 647 aa14.83□□□□□ -0.04
HDAC8-204ENST00000373560 STXBP3O00186 592 aa14.83□□□□□ -0.04
HDAC8-204ENST00000373560 LINC01565O15544 149 aa14.83□□□□□ -0.04
HDAC8-204ENST00000373560 NBNO60934 754 aa14.83□□□□□ -0.04
HDAC8-204ENST00000373560 MTX1Q13505 466 aa14.83□□□□□ -0.04
HDAC8-204ENST00000373560 EPC2Q52LR7 807 aa14.83□□□□□ -0.04
HDAC8-204ENST00000373560 TNNI3KQ59H18 835 aa14.83□□□□□ -0.04
HDAC8-204ENST00000373560 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.83□□□□□ -0.04
HDAC8-204ENST00000373560 RETREG2Q8NC44 543 aa14.83□□□□□ -0.04
HDAC8-204ENST00000373560 PURBQ96QR8 312 aaKnown RBP14.83□□□□□ -0.04
HDAC8-204ENST00000373560 FPGT-TNNI3KV9GXZ4 949 aa14.83□□□□□ -0.04
HDAC8-204ENST00000373560 MYH4Q9Y623 1939 aa14.83□□□□□ -0.04
HDAC8-204ENST00000373560 HYAL1Q12794 435 aa14.82□□□□□ -0.04
HDAC8-204ENST00000373560 CTC1Q2NKJ3 1217 aa14.82□□□□□ -0.04
HDAC8-204ENST00000373560 POP1Q99575 1024 aaKnown RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms