RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 RHOBTB3O94955 611 aa15.22■□□□□ 0.03
USP49-201ENST00000373006 NAP1L1P55209 391 aaKnown RBP15.22■□□□□ 0.03
USP49-201ENST00000373006 MIIPQ5JXC2 388 aa15.22■□□□□ 0.03
USP49-201ENST00000373006 FNBP4Q8N3X1 1017 aaPredicted RBP15.22■□□□□ 0.03
USP49-201ENST00000373006 SH3GL2Q99962 352 aa15.22■□□□□ 0.03
USP49-201ENST00000373006 CARD10Q9BWT7 1032 aa15.22■□□□□ 0.03
USP49-201ENST00000373006 SALL4Q9UJQ4 1053 aa15.22■□□□□ 0.03
USP49-201ENST00000373006 ZSCAN5CA6NGD5 496 aaPredicted RBP15.22■□□□□ 0.03
USP49-201ENST00000373006 BUB1O43683 1085 aa15.22■□□□□ 0.03
USP49-201ENST00000373006 AKR1B10O60218 316 aa15.22■□□□□ 0.03
USP49-201ENST00000373006 OPA1O60313 960 aa15.22■□□□□ 0.03
USP49-201ENST00000373006 CYP19A1P11511 503 aaPredicted RBP15.22■□□□□ 0.03
USP49-201ENST00000373006 EIF4A3P38919 411 aaKnown RBP15.22■□□□□ 0.03
USP49-201ENST00000373006 CHRNDQ07001 517 aa15.22■□□□□ 0.03
USP49-201ENST00000373006 MCTP2Q6DN12 878 aa15.22■□□□□ 0.03
USP49-201ENST00000373006 IFT81Q8WYA0 676 aa15.22■□□□□ 0.03
USP49-201ENST00000373006 P2RX5Q93086 422 aa15.22■□□□□ 0.03
USP49-201ENST00000373006 MMRN2Q9H8L6 949 aa15.22■□□□□ 0.03
USP49-201ENST00000373006 RBM12Q9NTZ6 932 aaKnown RBP15.22■□□□□ 0.03
USP49-201ENST00000373006 STIM2Q9P246 746 aa15.22■□□□□ 0.03
USP49-201ENST00000373006 CCDC194A0A1B0GVG4 234 aa15.22■□□□□ 0.03
USP49-201ENST00000373006 HSF2BPO75031 334 aa15.22■□□□□ 0.03
USP49-201ENST00000373006 DDAH1O94760 285 aa15.22■□□□□ 0.03
USP49-201ENST00000373006 KIF11P52732 1056 aa15.22■□□□□ 0.03
USP49-201ENST00000373006 KCNB1Q14721 858 aa15.22■□□□□ 0.03
USP49-201ENST00000373006 HAUS3Q68CZ6 603 aa15.22■□□□□ 0.03
USP49-201ENST00000373006 TMED8Q6PL24 325 aaPredicted RBP15.22■□□□□ 0.03
USP49-201ENST00000373006 ZIM3Q96PE6 472 aa15.22■□□□□ 0.03
USP49-201ENST00000373006 SH2D4AQ9H788 454 aa15.22■□□□□ 0.03
USP49-201ENST00000373006 SLC24A3Q9HC58 644 aa15.22■□□□□ 0.03
USP49-201ENST00000373006 CYP2D6P10635 497 aa15.21■□□□□ 0.03
USP49-201ENST00000373006 RNASE9P60153 205 aaKnown RBP15.21■□□□□ 0.03
USP49-201ENST00000373006 SUGP1Q8IWZ8 645 aaKnown RBP15.21■□□□□ 0.03
USP49-201ENST00000373006 KBTBD4Q9NVX7 518 aa15.21■□□□□ 0.03
USP49-201ENST00000373006 CAPN7Q9Y6W3 813 aa15.21■□□□□ 0.03
USP49-201ENST00000373006 PARP4Q9UKK3 1724 aaKnown RBP15.21■□□□□ 0.03
USP49-201ENST00000373006 FAM153BP0C7A2 387 aa15.21■□□□□ 0.03
USP49-201ENST00000373006 IGHMBP2P38935 993 aaKnown RBP15.21■□□□□ 0.03
USP49-201ENST00000373006 EPHB4P54760 987 aa15.21■□□□□ 0.03
USP49-201ENST00000373006 ASIC1P78348 528 aa15.21■□□□□ 0.03
USP49-201ENST00000373006 NNTQ13423 1086 aa15.21■□□□□ 0.03
USP49-201ENST00000373006 FAM153CQ494X1 144 aa15.21■□□□□ 0.03
USP49-201ENST00000373006 C8orf74Q6P047 294 aa15.21■□□□□ 0.03
USP49-201ENST00000373006 KCNV1Q6PIU1 500 aa15.21■□□□□ 0.03
USP49-201ENST00000373006 STAG2Q8N3U4 1231 aa15.21■□□□□ 0.03
USP49-201ENST00000373006 RETREG2Q8NC44 543 aa15.21■□□□□ 0.03
USP49-201ENST00000373006 FAM153AQ9UHL3 310 aa15.21■□□□□ 0.03
USP49-201ENST00000373006 DISP2A7MBM2 1401 aa15.21■□□□□ 0.02
USP49-201ENST00000373006 ADAMTSL3P82987 1691 aa15.2■□□□□ 0.02
USP49-201ENST00000373006 PLCG1P19174 1290 aa15.2■□□□□ 0.02
USP49-201ENST00000373006 CCNE1P24864 410 aa15.2■□□□□ 0.02
USP49-201ENST00000373006 GUCY1A3Q02108 690 aa15.2■□□□□ 0.02
USP49-201ENST00000373006 GBP6Q6ZN66 633 aa15.2■□□□□ 0.02
USP49-201ENST00000373006 KIRREL3Q8IZU9 778 aa15.2■□□□□ 0.02
USP49-201ENST00000373006 DHTKD1Q96HY7 919 aaPredicted RBP15.2■□□□□ 0.02
USP49-201ENST00000373006 TSGA10Q9BZW7 698 aa15.2■□□□□ 0.02
USP49-201ENST00000373006 NFU1Q9UMS0 254 aa15.2■□□□□ 0.02
USP49-201ENST00000373006 MYO1FO00160 1098 aa15.2■□□□□ 0.02
USP49-201ENST00000373006 CARSP49589 748 aaKnown RBP15.2■□□□□ 0.02
USP49-201ENST00000373006 GUCY2FP51841 1108 aa15.2■□□□□ 0.02
USP49-201ENST00000373006 APBA1Q02410 837 aa15.2■□□□□ 0.02
USP49-201ENST00000373006 RASSF7Q02833 373 aa15.2■□□□□ 0.02
USP49-201ENST00000373006 KCTD19Q17RG1 926 aaPredicted RBP15.2■□□□□ 0.02
USP49-201ENST00000373006 RRAGAQ7L523 313 aa15.2■□□□□ 0.02
USP49-201ENST00000373006 TMC4Q7Z404 712 aa15.2■□□□□ 0.02
USP49-201ENST00000373006 SLC39A2Q9NP94 309 aa15.2■□□□□ 0.02
USP49-201ENST00000373006 BTG4Q9NY30 223 aa15.2■□□□□ 0.02
USP49-201ENST00000373006 TSPY2A6NKD2 308 aa15.2■□□□□ 0.02
USP49-201ENST00000373006 SSBP05455 408 aaKnown RBP eCLIP15.2■□□□□ 0.02
USP49-201ENST00000373006 GLI1P08151 1106 aa15.2■□□□□ 0.02
USP49-201ENST00000373006 SCP2P22307 547 aa15.2■□□□□ 0.02
USP49-201ENST00000373006 ATP6V1AP38606 617 aa15.2■□□□□ 0.02
USP49-201ENST00000373006 PAFAH1B1P43034 410 aa15.2■□□□□ 0.02
USP49-201ENST00000373006 ZNF34Q8IZ26 560 aa15.2■□□□□ 0.02
USP49-201ENST00000373006 ZNF384Q8TF68 577 aa15.2■□□□□ 0.02
USP49-201ENST00000373006 CCDC43Q96MW1 224 aaKnown RBP15.2■□□□□ 0.02
USP49-201ENST00000373006 PLAGL2Q9UPG8 496 aa15.2■□□□□ 0.02
USP49-201ENST00000373006 HYOU1Q9Y4L1 999 aa15.2■□□□□ 0.02
USP49-201ENST00000373006 MYH10P35580 1976 aa15.19■□□□□ 0.02
USP49-201ENST00000373006 ADAMTS2O95450 1211 aa15.19■□□□□ 0.02
USP49-201ENST00000373006 MMP14P50281 582 aa15.19■□□□□ 0.02
USP49-201ENST00000373006 GFPT1Q06210 699 aaPredicted RBP15.19■□□□□ 0.02
USP49-201ENST00000373006 PCDHA4Q9UN74 947 aa15.19■□□□□ 0.02
USP49-201ENST00000373006 JAG2Q9Y219 1238 aa15.19■□□□□ 0.02
USP49-201ENST00000373006 LRRC53A6NM62 1247 aa15.19■□□□□ 0.02
USP49-201ENST00000373006 MAGEA1P43355 309 aa15.19■□□□□ 0.02
USP49-201ENST00000373006 TRADDQ15628 312 aa15.19■□□□□ 0.02
USP49-201ENST00000373006 TXNRD1Q16881 649 aa15.19■□□□□ 0.02
USP49-201ENST00000373006 CCDC155Q8N6L0 562 aa15.19■□□□□ 0.02
USP49-201ENST00000373006 RNPC3Q96LT9 517 aaKnown RBP15.19■□□□□ 0.02
USP49-201ENST00000373006 ALS2CR12Q96Q35 445 aa15.19■□□□□ 0.02
USP49-201ENST00000373006 KDM4FA0A1W2PPD8 638 aa15.18■□□□□ 0.02
USP49-201ENST00000373006 CALML3P27482 149 aa15.18■□□□□ 0.02
USP49-201ENST00000373006 EMBQ6PCB8 327 aa15.18■□□□□ 0.02
USP49-201ENST00000373006 NOC3LQ8WTT2 800 aaKnown RBP15.18■□□□□ 0.02
USP49-201ENST00000373006 MTMR8Q96EF0 704 aa15.18■□□□□ 0.02
USP49-201ENST00000373006 TRIM9Q9C026 710 aa15.18■□□□□ 0.02
USP49-201ENST00000373006 EPB41L5Q9HCM4 733 aa15.18■□□□□ 0.02
USP49-201ENST00000373006 TCP1P17987 556 aaKnown RBP15.18■□□□□ 0.02
USP49-201ENST00000373006 SEC24CP53992 1094 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms