RNA–Protein interactions for RNA: ENST00000372409.7

PCIF1-201, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCIF1, Length 2,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-201ENST00000372409 NHEJ1Q9H9Q4 299 aaPredicted RBP18.67■□□□□ 0.58
PCIF1-201ENST00000372409 VPS18Q9P253 973 aa18.67■□□□□ 0.58
PCIF1-201ENST00000372409 L1RE1Q9UN81 338 aa18.67■□□□□ 0.58
PCIF1-201ENST00000372409 NAV1Q8NEY1 1877 aa18.67■□□□□ 0.58
PCIF1-201ENST00000372409 PSMD14O00487 310 aa18.67■□□□□ 0.58
PCIF1-201ENST00000372409 AMPD3Q01432 767 aa18.67■□□□□ 0.58
PCIF1-201ENST00000372409 TRAPPC11Q7Z392 1133 aa18.67■□□□□ 0.58
PCIF1-201ENST00000372409 TXLNBQ8N3L3 684 aa18.67■□□□□ 0.58
PCIF1-201ENST00000372409 CEP95Q96GE4 821 aa18.67■□□□□ 0.58
PCIF1-201ENST00000372409 NUP58Q9BVL2 599 aa18.67■□□□□ 0.58
PCIF1-201ENST00000372409 ADAM21Q9UKJ8 722 aa18.67■□□□□ 0.58
PCIF1-201ENST00000372409 SAR1BQ9Y6B6 198 aa18.67■□□□□ 0.58
PCIF1-201ENST00000372409 CYP27A1Q02318 531 aa18.66■□□□□ 0.58
PCIF1-201ENST00000372409 REXO1Q8N1G1 1221 aaKnown RBP18.66■□□□□ 0.58
PCIF1-201ENST00000372409 C7orf25Q9BPX7 421 aa18.66■□□□□ 0.58
PCIF1-201ENST00000372409 GBP3Q9H0R5 595 aa18.66■□□□□ 0.58
PCIF1-201ENST00000372409 FRMPD2Q68DX3 1309 aaPredicted RBP18.66■□□□□ 0.58
PCIF1-201ENST00000372409 N4BP1O75113 896 aaKnown RBP18.66■□□□□ 0.58
PCIF1-201ENST00000372409 LMAN1P49257 510 aa18.66■□□□□ 0.58
PCIF1-201ENST00000372409 C16orf86Q6ZW13 317 aa18.66■□□□□ 0.58
PCIF1-201ENST00000372409 LACRTQ9GZZ8 138 aa18.66■□□□□ 0.58
PCIF1-201ENST00000372409 MACROD2A1Z1Q3 448 aa18.65■□□□□ 0.58
PCIF1-201ENST00000372409 RCCD1A6NED2 376 aa18.65■□□□□ 0.58
PCIF1-201ENST00000372409 RASSF10A6NK89 507 aa18.65■□□□□ 0.58
PCIF1-201ENST00000372409 NKRFO15226 690 aaKnown RBP eCLIP18.65■□□□□ 0.58
PCIF1-201ENST00000372409 UFL1O94874 794 aa18.65■□□□□ 0.58
PCIF1-201ENST00000372409 ZBED6P86452 979 aa18.65■□□□□ 0.58
PCIF1-201ENST00000372409 MEA1Q16626 185 aa18.65■□□□□ 0.58
PCIF1-201ENST00000372409 FKBP15Q5T1M5 1219 aa18.65■□□□□ 0.58
PCIF1-201ENST00000372409 CNNM4Q6P4Q7 775 aa18.65■□□□□ 0.58
PCIF1-201ENST00000372409 DYMQ7RTS9 669 aa18.65■□□□□ 0.58
PCIF1-201ENST00000372409 CNBD1Q8NA66 436 aa18.65■□□□□ 0.58
PCIF1-201ENST00000372409 NEDD1Q8NHV4 660 aa18.65■□□□□ 0.58
PCIF1-201ENST00000372409 CCDC102AQ96A19 550 aa18.65■□□□□ 0.58
PCIF1-201ENST00000372409 MMS19Q96T76 1030 aa18.65■□□□□ 0.58
PCIF1-201ENST00000372409 TTYH3Q9C0H2 523 aa18.65■□□□□ 0.58
PCIF1-201ENST00000372409 TNRC6CQ9HCJ0 1690 aaKnown RBP18.65■□□□□ 0.58
PCIF1-201ENST00000372409 USP17L5A8MUK1 530 aa18.65■□□□□ 0.58
PCIF1-201ENST00000372409 CASP8Q14790 479 aa18.65■□□□□ 0.58
PCIF1-201ENST00000372409 GPIHBP1Q8IV16 184 aa18.65■□□□□ 0.58
PCIF1-201ENST00000372409 CAGE1Q8TC20 777 aa18.65■□□□□ 0.58
PCIF1-201ENST00000372409 CDK5RAP3Q96JB5 506 aa18.65■□□□□ 0.58
PCIF1-201ENST00000372409 C8orf37Q96NL8 207 aa18.65■□□□□ 0.58
PCIF1-201ENST00000372409 MMTAG2Q9BU76 263 aaKnown RBP18.65■□□□□ 0.58
PCIF1-201ENST00000372409 DUSP10Q9Y6W6 482 aa18.65■□□□□ 0.58
PCIF1-201ENST00000372409 SNED1Q8TER0 1413 aa18.65■□□□□ 0.58
PCIF1-201ENST00000372409 ERCC3P19447 782 aa18.65■□□□□ 0.58
PCIF1-201ENST00000372409 GPSM2P81274 684 aa18.65■□□□□ 0.58
PCIF1-201ENST00000372409 SEMA3FQ13275 785 aa18.65■□□□□ 0.58
PCIF1-201ENST00000372409 SV2BQ7L1I2 683 aa18.65■□□□□ 0.58
PCIF1-201ENST00000372409 KIAA0895Q8NCT3 520 aa18.65■□□□□ 0.58
PCIF1-201ENST00000372409 COL24A1Q17RW2 1714 aa18.64■□□□□ 0.58
PCIF1-201ENST00000372409 SBF2Q86WG5 1849 aa18.64■□□□□ 0.57
PCIF1-201ENST00000372409 MIIPQ5JXC2 388 aa18.64■□□□□ 0.57
PCIF1-201ENST00000372409 RETREG2Q8NC44 543 aa18.64■□□□□ 0.57
PCIF1-201ENST00000372409 EHBP1Q8NDI1 1231 aa18.64■□□□□ 0.57
PCIF1-201ENST00000372409 RPGRQ92834 1020 aaKnown RBP18.64■□□□□ 0.57
PCIF1-201ENST00000372409 COA7Q96BR5 231 aa18.64■□□□□ 0.57
PCIF1-201ENST00000372409 CD209Q9NNX6 404 aa18.64■□□□□ 0.57
PCIF1-201ENST00000372409 LRWD1Q9UFC0 647 aa18.64■□□□□ 0.57
PCIF1-201ENST00000372409 EIF6P56537 245 aaKnown RBP18.64■□□□□ 0.57
PCIF1-201ENST00000372409 CALCRLQ16602 461 aa18.64■□□□□ 0.57
PCIF1-201ENST00000372409 SEMA6BQ9H3T3 888 aa18.64■□□□□ 0.57
PCIF1-201ENST00000372409 PHACTR2O75167 634 aa18.63■□□□□ 0.57
PCIF1-201ENST00000372409 IDEP14735 1019 aa18.63■□□□□ 0.57
PCIF1-201ENST00000372409 NGLY1Q96IV0 654 aa18.63■□□□□ 0.57
PCIF1-201ENST00000372409 CCDC42Q96M95 316 aa18.63■□□□□ 0.57
PCIF1-201ENST00000372409 TRERF1Q96PN7 1200 aa18.63■□□□□ 0.57
PCIF1-201ENST00000372409 JADE2Q9NQC1 790 aa18.63■□□□□ 0.57
PCIF1-201ENST00000372409 ZNF831Q5JPB2 1677 aa18.63■□□□□ 0.57
PCIF1-201ENST00000372409 PLEKP08567 350 aaPredicted RBP18.63■□□□□ 0.57
PCIF1-201ENST00000372409 TNNT3P45378 269 aaPredicted RBP18.63■□□□□ 0.57
PCIF1-201ENST00000372409 HSP90B2PQ58FF3 399 aa18.63■□□□□ 0.57
PCIF1-201ENST00000372409 TRAPPC3LQ5T215 181 aa18.63■□□□□ 0.57
PCIF1-201ENST00000372409 CCDC170Q8IYT3 715 aa18.63■□□□□ 0.57
PCIF1-201ENST00000372409 FAM207AQ9NSI2 230 aaPredicted RBP18.63■□□□□ 0.57
PCIF1-201ENST00000372409 EIF3CLB5ME19 914 aaKnown RBP18.62■□□□□ 0.57
PCIF1-201ENST00000372409 TUBBP07437 444 aa18.62■□□□□ 0.57
PCIF1-201ENST00000372409 PPP1R2P41236 205 aa18.62■□□□□ 0.57
PCIF1-201ENST00000372409 KIF5AQ12840 1032 aa18.62■□□□□ 0.57
PCIF1-201ENST00000372409 SPA17Q15506 151 aa18.62■□□□□ 0.57
PCIF1-201ENST00000372409 CCDC96Q2M329 555 aa18.62■□□□□ 0.57
PCIF1-201ENST00000372409 MFSD14BQ5SR56 506 aa18.62■□□□□ 0.57
PCIF1-201ENST00000372409 KRT26Q7Z3Y9 468 aa18.62■□□□□ 0.57
PCIF1-201ENST00000372409 EIF3CQ99613 913 aaKnown RBP18.62■□□□□ 0.57
PCIF1-201ENST00000372409 FAN1Q9Y2M0 1017 aa18.62■□□□□ 0.57
PCIF1-201ENST00000372409 GPR75-ASB3A0A0A6YYF3 556 aa18.62■□□□□ 0.57
PCIF1-201ENST00000372409 MYMKA6NI61 221 aa18.62■□□□□ 0.57
PCIF1-201ENST00000372409 ZNF185O15231 689 aa18.62■□□□□ 0.57
PCIF1-201ENST00000372409 TDP2O95551 362 aa18.62■□□□□ 0.57
PCIF1-201ENST00000372409 GRB10Q13322 594 aa18.62■□□□□ 0.57
PCIF1-201ENST00000372409 PICALMQ13492 652 aa18.62■□□□□ 0.57
PCIF1-201ENST00000372409 LRRC47Q8N1G4 583 aaKnown RBP18.62■□□□□ 0.57
PCIF1-201ENST00000372409 EXOC4Q96A65 974 aa18.62■□□□□ 0.57
PCIF1-201ENST00000372409 POTEMA6NI47 508 aa18.61■□□□□ 0.57
PCIF1-201ENST00000372409 ZMYND10O75800 440 aa18.61■□□□□ 0.57
PCIF1-201ENST00000372409 USP14P54578 494 aa18.61■□□□□ 0.57
PCIF1-201ENST00000372409 TMEM266Q2M3C6 531 aa18.61■□□□□ 0.57
PCIF1-201ENST00000372409 PAPD7Q5XG87 772 aaKnown RBP18.61■□□□□ 0.57
PCIF1-201ENST00000372409 MMRN2Q9H8L6 949 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms