RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 TMOD1P28289 359 aa6.04□□□□□ -1.44
ATG4A-204ENST00000372246 FNTAP49354 379 aa6.04□□□□□ -1.44
ATG4A-204ENST00000372246 EIF5P55010 431 aaKnown RBP6.04□□□□□ -1.44
ATG4A-204ENST00000372246 WTAPQ15007 396 aa6.04□□□□□ -1.44
ATG4A-204ENST00000372246 QPCTQ16769 361 aa6.04□□□□□ -1.44
ATG4A-204ENST00000372246 RILPL1Q5EBL4 403 aa6.04□□□□□ -1.44
ATG4A-204ENST00000372246 SMYD5Q6GMV2 418 aa6.04□□□□□ -1.44
ATG4A-204ENST00000372246 SH3RF1Q7Z6J0 888 aa6.04□□□□□ -1.44
ATG4A-204ENST00000372246 ZNF654Q8IZM8 581 aa6.04□□□□□ -1.44
ATG4A-204ENST00000372246 MB21D1Q8N884 522 aa6.04□□□□□ -1.44
ATG4A-204ENST00000372246 FANCBQ8NB91 859 aa6.04□□□□□ -1.44
ATG4A-204ENST00000372246 TTLL11Q8NHH1 800 aa6.04□□□□□ -1.44
ATG4A-204ENST00000372246 AENQ8WTP8 325 aaKnown RBP6.04□□□□□ -1.44
ATG4A-204ENST00000372246 UBAC1Q9BSL1 405 aa6.04□□□□□ -1.44
ATG4A-204ENST00000372246 NFAT5O94916 1531 aa6.04□□□□□ -1.44
ATG4A-204ENST00000372246 MYH13Q9UKX3 1938 aa6.04□□□□□ -1.44
ATG4A-204ENST00000372246 TCRBV5S4A2TA0A5A2 114 aa6.04□□□□□ -1.44
ATG4A-204ENST00000372246 ZNF233A6NK53 670 aa6.04□□□□□ -1.44
ATG4A-204ENST00000372246 CPP00450 1065 aa6.04□□□□□ -1.44
ATG4A-204ENST00000372246 MYBL1P10243 752 aa6.04□□□□□ -1.44
ATG4A-204ENST00000372246 NAP1L1P55209 391 aaKnown RBP6.04□□□□□ -1.44
ATG4A-204ENST00000372246 ARID5AQ03989 594 aa6.04□□□□□ -1.44
ATG4A-204ENST00000372246 NPY5RQ15761 445 aa6.04□□□□□ -1.44
ATG4A-204ENST00000372246 FAM47AQ5JRC9 791 aa6.04□□□□□ -1.44
ATG4A-204ENST00000372246 MFSD6Q6ZSS7 791 aa6.04□□□□□ -1.44
ATG4A-204ENST00000372246 SUGP1Q8IWZ8 645 aaKnown RBP6.04□□□□□ -1.44
ATG4A-204ENST00000372246 TRIM22Q8IYM9 498 aa6.04□□□□□ -1.44
ATG4A-204ENST00000372246 FBXL16Q8N461 479 aa6.04□□□□□ -1.44
ATG4A-204ENST00000372246 OTUD6BQ8N6M0 293 aa6.04□□□□□ -1.44
ATG4A-204ENST00000372246 GLIS3Q8NEA6 775 aa6.04□□□□□ -1.44
ATG4A-204ENST00000372246 SPATA4Q8NEY3 305 aa6.04□□□□□ -1.44
ATG4A-204ENST00000372246 OR8K1Q8NGG5 319 aa6.04□□□□□ -1.44
ATG4A-204ENST00000372246 RASSF8Q8NHQ8 419 aa6.04□□□□□ -1.44
ATG4A-204ENST00000372246 ZKSCAN4Q969J2 545 aaPredicted RBP6.04□□□□□ -1.44
ATG4A-204ENST00000372246 TRIM47Q96LD4 638 aa6.04□□□□□ -1.44
ATG4A-204ENST00000372246 SCLT1Q96NL6 688 aa6.04□□□□□ -1.44
ATG4A-204ENST00000372246 NAA15Q9BXJ9 866 aaKnown RBP6.04□□□□□ -1.44
ATG4A-204ENST00000372246 GBP3Q9H0R5 595 aa6.04□□□□□ -1.44
ATG4A-204ENST00000372246 BRMS1Q9HCU9 246 aa6.04□□□□□ -1.44
ATG4A-204ENST00000372246 GGT7Q9UJ14 662 aa6.04□□□□□ -1.44
ATG4A-204ENST00000372246 SHTN1A0MZ66 631 aa6.03□□□□□ -1.44
ATG4A-204ENST00000372246 HGSO14964 777 aaPredicted RBP6.03□□□□□ -1.44
ATG4A-204ENST00000372246 RPN1P04843 607 aaKnown RBP6.03□□□□□ -1.44
ATG4A-204ENST00000372246 FECHP22830 423 aa6.03□□□□□ -1.44
ATG4A-204ENST00000372246 GUCY2DQ02846 1103 aa6.03□□□□□ -1.44
ATG4A-204ENST00000372246 GFPT1Q06210 699 aaPredicted RBP6.03□□□□□ -1.44
ATG4A-204ENST00000372246 PPFIA1Q13136 1202 aa6.03□□□□□ -1.44
ATG4A-204ENST00000372246 IFIT5Q13325 482 aaKnown RBP6.03□□□□□ -1.44
ATG4A-204ENST00000372246 SF3B2Q13435 895 aaKnown RBP6.03□□□□□ -1.44
ATG4A-204ENST00000372246 RASGRF1Q13972 1273 aa6.03□□□□□ -1.44
ATG4A-204ENST00000372246 AKNAD1Q5T1N1 836 aa6.03□□□□□ -1.44
ATG4A-204ENST00000372246 NAA35Q5VZE5 725 aa6.03□□□□□ -1.44
ATG4A-204ENST00000372246 PAPD7Q5XG87 772 aaKnown RBP6.03□□□□□ -1.44
ATG4A-204ENST00000372246 HAUS3Q68CZ6 603 aa6.03□□□□□ -1.44
ATG4A-204ENST00000372246 PDXDC2PQ6P474 469 aa6.03□□□□□ -1.44
ATG4A-204ENST00000372246 CCDC91Q7Z6B0 441 aa6.03□□□□□ -1.44
ATG4A-204ENST00000372246 SLC51AQ86UW1 340 aa6.03□□□□□ -1.44
ATG4A-204ENST00000372246 FAM228AQ86W67 206 aa6.03□□□□□ -1.44
ATG4A-204ENST00000372246 C2CD5Q86YS7 1000 aa6.03□□□□□ -1.44
ATG4A-204ENST00000372246 KLHL7Q8IXQ5 586 aa6.03□□□□□ -1.44
ATG4A-204ENST00000372246 PIK3R5Q8WYR1 880 aa6.03□□□□□ -1.44
ATG4A-204ENST00000372246 N4BP2L2Q92802 583 aaPredicted RBP6.03□□□□□ -1.44
ATG4A-204ENST00000372246 TBC1D31Q96DN5 1066 aa6.03□□□□□ -1.44
ATG4A-204ENST00000372246 ACBD3Q9H3P7 528 aa6.03□□□□□ -1.44
ATG4A-204ENST00000372246 EPB41L5Q9HCM4 733 aa6.03□□□□□ -1.44
ATG4A-204ENST00000372246 HAUS2Q9NVX0 235 aa6.03□□□□□ -1.44
ATG4A-204ENST00000372246 LIMA1Q9UHB6 759 aaKnown RBP6.03□□□□□ -1.44
ATG4A-204ENST00000372246 OVOS2A0A0G2JMS6 1433 aa6.03□□□□□ -1.44
ATG4A-204ENST00000372246 TNKSO95271 1327 aa6.03□□□□□ -1.44
ATG4A-204ENST00000372246 FAM205AQ6ZU69 1335 aa6.03□□□□□ -1.44
ATG4A-204ENST00000372246 STK36Q9NRP7 1315 aa6.03□□□□□ -1.44
ATG4A-204ENST00000372246 E7EVH7 732 aa6.03□□□□□ -1.44
ATG4A-204ENST00000372246 DNM1LO00429 736 aa6.03□□□□□ -1.44
ATG4A-204ENST00000372246 LSP1P33241 339 aa6.03□□□□□ -1.44
ATG4A-204ENST00000372246 FLT3P36888 993 aa6.03□□□□□ -1.44
ATG4A-204ENST00000372246 GSCP56915 257 aaPredicted RBP6.03□□□□□ -1.44
ATG4A-204ENST00000372246 DYNLL1P63167 89 aaKnown RBP6.03□□□□□ -1.44
ATG4A-204ENST00000372246 RASSF7Q02833 373 aa6.03□□□□□ -1.44
ATG4A-204ENST00000372246 HIC1Q14526 733 aa6.03□□□□□ -1.44
ATG4A-204ENST00000372246 ACCSLQ4AC99 568 aa6.03□□□□□ -1.44
ATG4A-204ENST00000372246 TTC38Q5R3I4 469 aa6.03□□□□□ -1.44
ATG4A-204ENST00000372246 UBAP2Q5T6F2 1119 aaKnown RBP6.03□□□□□ -1.44
ATG4A-204ENST00000372246 KSR1Q8IVT5 923 aa6.03□□□□□ -1.44
ATG4A-204ENST00000372246 MTMR8Q96EF0 704 aa6.03□□□□□ -1.44
ATG4A-204ENST00000372246 SH3GL2Q99962 352 aa6.03□□□□□ -1.44
ATG4A-204ENST00000372246 TMEM60Q9H2L4 133 aa6.03□□□□□ -1.44
ATG4A-204ENST00000372246 FOXP1Q9H334 677 aaPredicted RBP6.03□□□□□ -1.44
ATG4A-204ENST00000372246 AATFQ9NY61 560 aaKnown RBP eCLIP6.03□□□□□ -1.446e-7■■■■■ 46.9
ATG4A-204ENST00000372246 ARHGAP20Q9P2F6 1191 aa6.03□□□□□ -1.44
ATG4A-204ENST00000372246 ABCF2Q9UG63 623 aa6.03□□□□□ -1.44
ATG4A-204ENST00000372246 FAM184BQ9ULE4 1060 aa6.03□□□□□ -1.44
ATG4A-204ENST00000372246 TBX22Q9Y458 520 aa6.03□□□□□ -1.44
ATG4A-204ENST00000372246 AFDNP55196 1824 aaKnown RBP6.03□□□□□ -1.44
ATG4A-204ENST00000372246 ECM29Q5VYK3 1845 aa6.03□□□□□ -1.44
ATG4A-204ENST00000372246 DEXIO95424 95 aa6.02□□□□□ -1.45
ATG4A-204ENST00000372246 ITGBL1O95965 494 aaPredicted RBP6.02□□□□□ -1.45
ATG4A-204ENST00000372246 PCCAP05165 728 aaPredicted RBP6.02□□□□□ -1.45
ATG4A-204ENST00000372246 CCDC172P0C7W6 258 aa6.02□□□□□ -1.45
ATG4A-204ENST00000372246 EIF4A3P38919 411 aaKnown RBP6.02□□□□□ -1.45
ATG4A-204ENST00000372246 TBC1D8BQ0IIM8 1120 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms