RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 COL19A1Q14993 1142 aa9.86□□□□□ -0.83
ATG4A-203ENST00000372232 CCDC181Q5TID7 509 aa9.86□□□□□ -0.83
ATG4A-203ENST00000372232 EGFLAMQ63HQ2 1017 aa9.86□□□□□ -0.83
ATG4A-203ENST00000372232 SDE2Q6IQ49 451 aa9.86□□□□□ -0.83
ATG4A-203ENST00000372232 WDR93Q6P2C0 686 aa9.86□□□□□ -0.83
ATG4A-203ENST00000372232 CYB5D1Q6P9G0 228 aa9.86□□□□□ -0.83
ATG4A-203ENST00000372232 LDHAL6AQ6ZMR3 332 aa9.86□□□□□ -0.83
ATG4A-203ENST00000372232 BZW1Q7L1Q6 419 aaKnown RBP9.86□□□□□ -0.83
ATG4A-203ENST00000372232 ACRBPQ8NEB7 543 aa9.86□□□□□ -0.83
ATG4A-203ENST00000372232 ZFAND2BQ8WV99 257 aa9.86□□□□□ -0.83
ATG4A-203ENST00000372232 OSBP2Q969R2 916 aa9.86□□□□□ -0.83
ATG4A-203ENST00000372232 TUBB2BQ9BVA1 445 aa9.86□□□□□ -0.83
ATG4A-203ENST00000372232 XPO4Q9C0E2 1151 aaKnown RBP9.86□□□□□ -0.83
ATG4A-203ENST00000372232 CCSER2Q9H7U1 834 aa9.86□□□□□ -0.83
ATG4A-203ENST00000372232 ANO10Q9NW15 660 aa9.86□□□□□ -0.83
ATG4A-203ENST00000372232 GGA2Q9UJY4 613 aa9.86□□□□□ -0.83
ATG4A-203ENST00000372232 HPCAL4Q9UM19 191 aa9.86□□□□□ -0.83
ATG4A-203ENST00000372232 G3BP2Q9UN86 482 aaKnown RBP9.86□□□□□ -0.83
ATG4A-203ENST00000372232 ITGB4P16144 1822 aa9.86□□□□□ -0.83
ATG4A-203ENST00000372232 M0R2C6 588 aa9.85□□□□□ -0.83
ATG4A-203ENST00000372232 PDLIM1O00151 329 aa9.85□□□□□ -0.83
ATG4A-203ENST00000372232 IRS4O14654 1257 aaPredicted RBP9.85□□□□□ -0.83
ATG4A-203ENST00000372232 PPP1R12BO60237 982 aaPredicted RBP9.85□□□□□ -0.83
ATG4A-203ENST00000372232 PPFIA3O75145 1194 aa9.85□□□□□ -0.83
ATG4A-203ENST00000372232 ZFYP08048 801 aaPredicted RBP9.85□□□□□ -0.83
ATG4A-203ENST00000372232 FERP16591 822 aa9.85□□□□□ -0.83
ATG4A-203ENST00000372232 MAPK8P45983 427 aa9.85□□□□□ -0.83
ATG4A-203ENST00000372232 EXOSC10Q01780 885 aaKnown RBP9.85□□□□□ -0.83
ATG4A-203ENST00000372232 IFFO1Q0D2I5 559 aa9.85□□□□□ -0.83
ATG4A-203ENST00000372232 SCARF1Q14162 830 aa9.85□□□□□ -0.83
ATG4A-203ENST00000372232 OXLD1Q5BKU9 147 aa9.85□□□□□ -0.83
ATG4A-203ENST00000372232 CEP57L1Q8IYX8 460 aa9.85□□□□□ -0.83
ATG4A-203ENST00000372232 LEO1Q8WVC0 666 aaPredicted RBP9.85□□□□□ -0.83
ATG4A-203ENST00000372232 BRF1Q92994 677 aa9.85□□□□□ -0.83
ATG4A-203ENST00000372232 SPACA7Q96KW9 195 aa9.85□□□□□ -0.83
ATG4A-203ENST00000372232 DUSP9Q99956 384 aaKnown RBP9.85□□□□□ -0.83
ATG4A-203ENST00000372232 HINFPQ9BQA5 517 aa9.85□□□□□ -0.83
ATG4A-203ENST00000372232 LRRC2Q9BYS8 371 aa9.85□□□□□ -0.83
ATG4A-203ENST00000372232 TRMT112Q9UI30 125 aaKnown RBP9.85□□□□□ -0.83
ATG4A-203ENST00000372232 WWC3Q9ULE0 1092 aa9.85□□□□□ -0.83
ATG4A-203ENST00000372232 TPX2Q9ULW0 747 aaKnown RBP9.85□□□□□ -0.83
ATG4A-203ENST00000372232 LHX6Q9UPM6 363 aa9.85□□□□□ -0.83
ATG4A-203ENST00000372232 SAMM50Q9Y512 469 aa9.85□□□□□ -0.83
ATG4A-203ENST00000372232 RIC1Q4ADV7 1423 aa9.85□□□□□ -0.83
ATG4A-203ENST00000372232 SPEF2Q9C093 1822 aa9.85□□□□□ -0.83
ATG4A-203ENST00000372232 A0A0G2JLW4 131 aa9.85□□□□□ -0.83
ATG4A-203ENST00000372232 OPA1O60313 960 aa9.85□□□□□ -0.83
ATG4A-203ENST00000372232 JAK2O60674 1132 aa9.85□□□□□ -0.83
ATG4A-203ENST00000372232 F12P00748 615 aaPredicted RBP9.85□□□□□ -0.83
ATG4A-203ENST00000372232 RPSAP08865 295 aaKnown RBP9.85□□□□□ -0.83
ATG4A-203ENST00000372232 PTPREP23469 700 aa9.85□□□□□ -0.83
ATG4A-203ENST00000372232 PAPOLAP51003 745 aaKnown RBP9.85□□□□□ -0.83
ATG4A-203ENST00000372232 GTF2IP78347 998 aa9.85□□□□□ -0.83
ATG4A-203ENST00000372232 USP4Q13107 963 aa9.85□□□□□ -0.83
ATG4A-203ENST00000372232 SLMAPQ14BN4 828 aa9.85□□□□□ -0.83
ATG4A-203ENST00000372232 METTL24Q5JXM2 366 aa9.85□□□□□ -0.83
ATG4A-203ENST00000372232 MTHFD1LQ6UB35 978 aa9.85□□□□□ -0.83
ATG4A-203ENST00000372232 FERMT3Q86UX7 667 aa9.85□□□□□ -0.83
ATG4A-203ENST00000372232 DZIP3Q86Y13 1208 aaKnown RBP9.85□□□□□ -0.83
ATG4A-203ENST00000372232 TRIM42Q8IWZ5 723 aa9.85□□□□□ -0.83
ATG4A-203ENST00000372232 AOPEPQ8N6M6 819 aa9.85□□□□□ -0.83
ATG4A-203ENST00000372232 TRIM58Q8NG06 486 aa9.85□□□□□ -0.83
ATG4A-203ENST00000372232 NUP133Q8WUM0 1156 aa9.85□□□□□ -0.83
ATG4A-203ENST00000372232 RBM17Q96I25 401 aaKnown RBP9.85□□□□□ -0.83
ATG4A-203ENST00000372232 SH3GL2Q99962 352 aa9.85□□□□□ -0.83
ATG4A-203ENST00000372232 AGXT2Q9BYV1 514 aa9.85□□□□□ -0.83
ATG4A-203ENST00000372232 IQCGQ9H095 443 aaKnown RBP9.85□□□□□ -0.83
ATG4A-203ENST00000372232 CENPHQ9H3R5 247 aa9.85□□□□□ -0.83
ATG4A-203ENST00000372232 ZSWIM4Q9H7M6 989 aa9.85□□□□□ -0.83
ATG4A-203ENST00000372232 KLHL42Q9P2K6 505 aa9.85□□□□□ -0.83
ATG4A-203ENST00000372232 SUN2Q9UH99 717 aa9.85□□□□□ -0.83
ATG4A-203ENST00000372232 SEPT9Q9UHD8 586 aaPredicted RBP9.85□□□□□ -0.83
ATG4A-203ENST00000372232 ABCC12Q96J65 1359 aa9.84□□□□□ -0.83
ATG4A-203ENST00000372232 E7EWF7 191 aa9.84□□□□□ -0.83
ATG4A-203ENST00000372232 BIN1O00499 593 aa9.84□□□□□ -0.83
ATG4A-203ENST00000372232 ARHGAP6O43182 974 aa9.84□□□□□ -0.83
ATG4A-203ENST00000372232 ZAP70P43403 619 aa9.84□□□□□ -0.83
ATG4A-203ENST00000372232 ATP1A2P50993 1020 aa9.84□□□□□ -0.83
ATG4A-203ENST00000372232 GNGT1P63211 74 aa9.84□□□□□ -0.83
ATG4A-203ENST00000372232 SFSWAPQ12872 951 aaKnown RBP9.84□□□□□ -0.83
ATG4A-203ENST00000372232 RNF19BQ6ZMZ0 732 aa9.84□□□□□ -0.83
ATG4A-203ENST00000372232 CCDC47Q96A33 483 aaKnown RBP9.84□□□□□ -0.83
ATG4A-203ENST00000372232 ACSBG1Q96GR2 724 aa9.84□□□□□ -0.83
ATG4A-203ENST00000372232 EHD4Q9H223 541 aa9.84□□□□□ -0.83
ATG4A-203ENST00000372232 ACTR5Q9H9F9 607 aaPredicted RBP9.84□□□□□ -0.83
ATG4A-203ENST00000372232 EBF2Q9HAK2 575 aa9.84□□□□□ -0.83
ATG4A-203ENST00000372232 NOD1Q9Y239 953 aa9.84□□□□□ -0.83
ATG4A-203ENST00000372232 FOXP2O15409 715 aa9.84□□□□□ -0.83
ATG4A-203ENST00000372232 PDE8AO60658 829 aa9.84□□□□□ -0.83
ATG4A-203ENST00000372232 PFKFB2O60825 505 aa9.84□□□□□ -0.83
ATG4A-203ENST00000372232 ZNF202O95125 648 aa9.84□□□□□ -0.83
ATG4A-203ENST00000372232 ADAMTS2O95450 1211 aa9.84□□□□□ -0.83
ATG4A-203ENST00000372232 ZBED6P86452 979 aa9.84□□□□□ -0.83
ATG4A-203ENST00000372232 E2F5Q15329 346 aa9.84□□□□□ -0.83
ATG4A-203ENST00000372232 DESI1Q6ICB0 168 aa9.84□□□□□ -0.83
ATG4A-203ENST00000372232 ZNF34Q8IZ26 560 aa9.84□□□□□ -0.83
ATG4A-203ENST00000372232 FUKQ8N0W3 1084 aa9.84□□□□□ -0.83
ATG4A-203ENST00000372232 VGLL2Q8N8G2 317 aa9.84□□□□□ -0.83
ATG4A-203ENST00000372232 PGBD1Q96JS3 809 aa9.84□□□□□ -0.83
ATG4A-203ENST00000372232 SPAG5Q96R06 1193 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms