RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 KCNK18Q7Z418 384 aa13.17□□□□□ -0.3
PDE6C-201ENST00000371447 RGS22Q8NE09 1264 aa13.17□□□□□ -0.3
PDE6C-201ENST00000371447 ANKS1AQ92625 1134 aa13.17□□□□□ -0.3
PDE6C-201ENST00000371447 RWDD2AQ9UIY3 292 aa13.17□□□□□ -0.3
PDE6C-201ENST00000371447 NPHP3-ACAD11A0A0J9YXS1 232 aa13.17□□□□□ -0.3
PDE6C-201ENST00000371447 PDE6BP35913 854 aa13.17□□□□□ -0.3
PDE6C-201ENST00000371447 EN1Q05925 392 aaPredicted RBP13.17□□□□□ -0.3
PDE6C-201ENST00000371447 KIF4BQ2VIQ3 1234 aa13.17□□□□□ -0.3
PDE6C-201ENST00000371447 CDKAL1Q5VV42 579 aa13.17□□□□□ -0.3
PDE6C-201ENST00000371447 CTAGE1Q96RT6 745 aa13.17□□□□□ -0.3
PDE6C-201ENST00000371447 LZTS2Q9BRK4 669 aa13.17□□□□□ -0.3
PDE6C-201ENST00000371447 GAKO14976 1311 aa13.17□□□□□ -0.3
PDE6C-201ENST00000371447 ONECUT3O60422 494 aaPredicted RBP13.16□□□□□ -0.3
PDE6C-201ENST00000371447 MFAP3LO75121 409 aa13.16□□□□□ -0.3
PDE6C-201ENST00000371447 ZNF543Q08ER8 600 aa13.16□□□□□ -0.3
PDE6C-201ENST00000371447 SLFN13Q68D06 897 aa13.16□□□□□ -0.3
PDE6C-201ENST00000371447 MTERF4Q7Z6M4 381 aaKnown RBP13.16□□□□□ -0.3
PDE6C-201ENST00000371447 ANKRD7Q92527 254 aa13.16□□□□□ -0.3
PDE6C-201ENST00000371447 MASTLQ96GX5 879 aa13.16□□□□□ -0.3
PDE6C-201ENST00000371447 ERO1AQ96HE7 468 aa13.16□□□□□ -0.3
PDE6C-201ENST00000371447 TRIM9Q9C026 710 aa13.16□□□□□ -0.3
PDE6C-201ENST00000371447 FAM207AQ9NSI2 230 aaPredicted RBP13.16□□□□□ -0.3
PDE6C-201ENST00000371447 LAMB2P55268 1798 aa13.16□□□□□ -0.3
PDE6C-201ENST00000371447 ENC1O14682 589 aa13.16□□□□□ -0.3
PDE6C-201ENST00000371447 KRT18P05783 430 aaKnown RBP13.16□□□□□ -0.3
PDE6C-201ENST00000371447 TBC1D8BQ0IIM8 1120 aa13.16□□□□□ -0.3
PDE6C-201ENST00000371447 TMEM266Q2M3C6 531 aa13.16□□□□□ -0.3
PDE6C-201ENST00000371447 RBM26Q5T8P6 1007 aaKnown RBP13.16□□□□□ -0.3
PDE6C-201ENST00000371447 CCDC47Q96A33 483 aaKnown RBP13.16□□□□□ -0.3
PDE6C-201ENST00000371447 DNAJC18Q9H819 358 aa13.16□□□□□ -0.3
PDE6C-201ENST00000371447 ST7Q9NRC1 585 aa13.16□□□□□ -0.3
PDE6C-201ENST00000371447 DDX25Q9UHL0 483 aaKnown RBP13.16□□□□□ -0.3
PDE6C-201ENST00000371447 TTC26A0AVF1 554 aa13.16□□□□□ -0.3
PDE6C-201ENST00000371447 KIF2AO00139 706 aaPredicted RBP13.16□□□□□ -0.3
PDE6C-201ENST00000371447 PPIP5K2O43314 1243 aa13.16□□□□□ -0.3
PDE6C-201ENST00000371447 SEC31AO94979 1220 aaKnown RBP13.16□□□□□ -0.3
PDE6C-201ENST00000371447 GH2P01242 217 aa13.16□□□□□ -0.3
PDE6C-201ENST00000371447 CYP4A11Q02928 519 aa13.16□□□□□ -0.3
PDE6C-201ENST00000371447 TSR1Q2NL82 804 aaKnown RBP13.16□□□□□ -0.3
PDE6C-201ENST00000371447 KRT79Q5XKE5 535 aa13.16□□□□□ -0.3
PDE6C-201ENST00000371447 SV2BQ7L1I2 683 aa13.16□□□□□ -0.3
PDE6C-201ENST00000371447 ADSSL1Q8N142 457 aa13.16□□□□□ -0.3
PDE6C-201ENST00000371447 CCDC155Q8N6L0 562 aa13.16□□□□□ -0.3
PDE6C-201ENST00000371447 DRC1Q96MC2 740 aa13.16□□□□□ -0.3
PDE6C-201ENST00000371447 AGPAT5Q9NUQ2 364 aa13.16□□□□□ -0.3
PDE6C-201ENST00000371447 ICA1Q05084 483 aa13.15□□□□□ -0.3
PDE6C-201ENST00000371447 QRICH1Q2TAL8 776 aa13.15□□□□□ -0.3
PDE6C-201ENST00000371447 PRR16Q569H4 304 aa13.15□□□□□ -0.3
PDE6C-201ENST00000371447 IRF2BP1Q8IU81 584 aa13.15□□□□□ -0.3
PDE6C-201ENST00000371447 TUBGCP2Q9BSJ2 902 aa13.15□□□□□ -0.3
PDE6C-201ENST00000371447 MMTAG2Q9BU76 263 aaKnown RBP13.15□□□□□ -0.3
PDE6C-201ENST00000371447 A0A1B0GUL6 1792 aa13.15□□□□□ -0.3
PDE6C-201ENST00000371447 SCN7AQ01118 1682 aa13.15□□□□□ -0.3
PDE6C-201ENST00000371447 MYMKA6NI61 221 aa13.15□□□□□ -0.3
PDE6C-201ENST00000371447 E9PMD0 336 aa13.15□□□□□ -0.3
PDE6C-201ENST00000371447 CCP110O43303 1012 aa13.15□□□□□ -0.3
PDE6C-201ENST00000371447 DNA2P51530 1060 aa13.15□□□□□ -0.3
PDE6C-201ENST00000371447 ERVK-24P63145 666 aa13.15□□□□□ -0.3
PDE6C-201ENST00000371447 CYP27A1Q02318 531 aa13.15□□□□□ -0.3
PDE6C-201ENST00000371447 SYCP1Q15431 976 aa13.15□□□□□ -0.3
PDE6C-201ENST00000371447 FAM163AQ96GL9 167 aaPredicted RBP13.15□□□□□ -0.3
PDE6C-201ENST00000371447 PRMT6Q96LA8 375 aaPredicted RBP13.15□□□□□ -0.3
PDE6C-201ENST00000371447 NOC4LQ9BVI4 516 aaKnown RBP13.15□□□□□ -0.3
PDE6C-201ENST00000371447 MMRN2Q9H8L6 949 aa13.15□□□□□ -0.3
PDE6C-201ENST00000371447 VGLL3A8MV65 326 aa13.15□□□□□ -0.31
PDE6C-201ENST00000371447 RGL2O15211 777 aa13.15□□□□□ -0.31
PDE6C-201ENST00000371447 KLRC4O43908 158 aa13.15□□□□□ -0.31
PDE6C-201ENST00000371447 C15orf52Q6ZUT6 534 aaKnown RBP13.15□□□□□ -0.31
PDE6C-201ENST00000371447 CRACR2AQ9BSW2 395 aa13.15□□□□□ -0.31
PDE6C-201ENST00000371447 PKD2L1Q9P0L9 805 aa13.15□□□□□ -0.31
PDE6C-201ENST00000371447 KIAA1024Q9UPX6 916 aa13.15□□□□□ -0.31
PDE6C-201ENST00000371447 ADGRG1Q9Y653 693 aa13.15□□□□□ -0.31
PDE6C-201ENST00000371447 KIF5CO60282 957 aa13.14□□□□□ -0.31
PDE6C-201ENST00000371447 ECM1Q16610 540 aa13.14□□□□□ -0.31
PDE6C-201ENST00000371447 ASPRV1Q53RT3 343 aa13.14□□□□□ -0.31
PDE6C-201ENST00000371447 CCDC174Q6PII3 467 aa13.14□□□□□ -0.31
PDE6C-201ENST00000371447 ELOA2Q8IYF1 753 aaPredicted RBP13.14□□□□□ -0.31
PDE6C-201ENST00000371447 CUL5Q93034 780 aa13.14□□□□□ -0.31
PDE6C-201ENST00000371447 CNOT6LQ96LI5 555 aaKnown RBP13.14□□□□□ -0.31
PDE6C-201ENST00000371447 CSRNP1Q96S65 589 aa13.14□□□□□ -0.31
PDE6C-201ENST00000371447 PCDHA12Q9UN75 941 aa13.14□□□□□ -0.31
PDE6C-201ENST00000371447 LUC7L2Q9Y383 392 aaKnown RBP13.14□□□□□ -0.31
PDE6C-201ENST00000371447 PNMA6FA0A0J9YX94 578 aa13.14□□□□□ -0.31
PDE6C-201ENST00000371447 CHMP2AO43633 222 aa13.14□□□□□ -0.31
PDE6C-201ENST00000371447 JAG1P78504 1218 aa13.14□□□□□ -0.31
PDE6C-201ENST00000371447 ARID5AQ03989 594 aa13.14□□□□□ -0.31
PDE6C-201ENST00000371447 GABPAQ06546 454 aa13.14□□□□□ -0.31
PDE6C-201ENST00000371447 TMED8Q6PL24 325 aaPredicted RBP13.14□□□□□ -0.31
PDE6C-201ENST00000371447 CDAN1Q8IWY9 1227 aa13.14□□□□□ -0.31
PDE6C-201ENST00000371447 RIOX1Q9H6W3 641 aa13.14□□□□□ -0.31
PDE6C-201ENST00000371447 ABHD10Q9NUJ1 306 aa13.14□□□□□ -0.31
PDE6C-201ENST00000371447 KBTBD4Q9NVX7 518 aa13.14□□□□□ -0.31
PDE6C-201ENST00000371447 ECE1P42892 770 aa13.13□□□□□ -0.31
PDE6C-201ENST00000371447 MRPL12P52815 198 aaKnown RBP13.13□□□□□ -0.31
PDE6C-201ENST00000371447 GRB10Q13322 594 aa13.13□□□□□ -0.31
PDE6C-201ENST00000371447 CDC37Q16543 378 aaPredicted RBP13.13□□□□□ -0.31
PDE6C-201ENST00000371447 GALNT17Q6IS24 598 aa13.13□□□□□ -0.31
PDE6C-201ENST00000371447 CNGA4Q8IV77 575 aa13.13□□□□□ -0.31
PDE6C-201ENST00000371447 SLC35F6Q8N357 371 aa13.13□□□□□ -0.31
PDE6C-201ENST00000371447 LARP4BQ92615 738 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms