RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 NACC1Q96RE7 527 aa16.21■□□□□ 0.19
NDC1-201ENST00000371429 MXRA7P84157 204 aa16.21■□□□□ 0.19
NDC1-201ENST00000371429 C8orf74Q6P047 294 aa16.21■□□□□ 0.19
NDC1-201ENST00000371429 SP8Q8IXZ3 490 aa16.21■□□□□ 0.19
NDC1-201ENST00000371429 CUEDC2Q9H467 287 aa16.21■□□□□ 0.19
NDC1-201ENST00000371429 GLI2P10070 1586 aa16.21■□□□□ 0.19
NDC1-201ENST00000371429 PNMA6FA0A0J9YX94 578 aa16.21■□□□□ 0.19
NDC1-201ENST00000371429 CYP2E1P05181 493 aaPredicted RBP16.21■□□□□ 0.19
NDC1-201ENST00000371429 SLC17A8Q8NDX2 589 aa16.21■□□□□ 0.19
NDC1-201ENST00000371429 KCNK9Q9NPC2 374 aa16.21■□□□□ 0.19
NDC1-201ENST00000371429 RIPOR2Q9Y4F9 1068 aa16.21■□□□□ 0.19
NDC1-201ENST00000371429 ZNF710Q8N1W2 664 aa16.21■□□□□ 0.18
NDC1-201ENST00000371429 FBF1Q8TES7 1133 aa16.21■□□□□ 0.18
NDC1-201ENST00000371429 UBLCP1Q8WVY7 318 aaPredicted RBP16.21■□□□□ 0.18
NDC1-201ENST00000371429 ASIC3Q9UHC3 531 aa16.21■□□□□ 0.18
NDC1-201ENST00000371429 ZNF215Q9UL58 517 aaPredicted RBP16.21■□□□□ 0.18
NDC1-201ENST00000371429 PRPF3O43395 683 aaKnown RBP16.2■□□□□ 0.18
NDC1-201ENST00000371429 IFRD2Q12894 506 aaPredicted RBP16.2■□□□□ 0.18
NDC1-201ENST00000371429 CEP128Q6ZU80 1094 aa16.2■□□□□ 0.18
NDC1-201ENST00000371429 IFIH1Q9BYX4 1025 aaKnown RBP16.2■□□□□ 0.18
NDC1-201ENST00000371429 FAM170AA1A519 330 aa16.2■□□□□ 0.18
NDC1-201ENST00000371429 TLR3O15455 904 aaKnown RBP16.2■□□□□ 0.18
NDC1-201ENST00000371429 GABPAQ06546 454 aa16.2■□□□□ 0.18
NDC1-201ENST00000371429 PPP2R5DQ14738 602 aa16.2■□□□□ 0.18
NDC1-201ENST00000371429 R3HDM1Q15032 1099 aaKnown RBP16.2■□□□□ 0.18
NDC1-201ENST00000371429 XPO4Q9C0E2 1151 aaKnown RBP16.2■□□□□ 0.18
NDC1-201ENST00000371429 NDUFA8P51970 172 aa16.2■□□□□ 0.18
NDC1-201ENST00000371429 GPSM2P81274 684 aa16.2■□□□□ 0.18
NDC1-201ENST00000371429 RPS6KA1Q15418 735 aa16.2■□□□□ 0.18
NDC1-201ENST00000371429 OR8K1Q8NGG5 319 aa16.2■□□□□ 0.18
NDC1-201ENST00000371429 NBPF26B4DH59 902 aa16.2■□□□□ 0.18
NDC1-201ENST00000371429 CHRNA5P30532 468 aa16.2■□□□□ 0.18
NDC1-201ENST00000371429 LACTBP83111 547 aaPredicted RBP16.2■□□□□ 0.18
NDC1-201ENST00000371429 NR5A1Q13285 461 aa16.2■□□□□ 0.18
NDC1-201ENST00000371429 UBE2SQ16763 222 aa16.2■□□□□ 0.18
NDC1-201ENST00000371429 NBPF10Q6P3W6 841 aaKnown RBP16.2■□□□□ 0.18
NDC1-201ENST00000371429 APOBEC3FQ8IUX4 373 aaKnown RBP16.2■□□□□ 0.18
NDC1-201ENST00000371429 NBPF15Q8N660 670 aa16.2■□□□□ 0.18
NDC1-201ENST00000371429 PI4K2BQ8TCG2 481 aa16.2■□□□□ 0.18
NDC1-201ENST00000371429 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.2■□□□□ 0.18
NDC1-201ENST00000371429 LRFN2Q9ULH4 789 aa16.2■□□□□ 0.18
NDC1-201ENST00000371429 CYP2D6P10635 497 aa16.19■□□□□ 0.18
NDC1-201ENST00000371429 ABCB4P21439 1286 aa16.19■□□□□ 0.18
NDC1-201ENST00000371429 HOXA13P31271 388 aaPredicted RBP16.19■□□□□ 0.18
NDC1-201ENST00000371429 KMT5BQ4FZB7 885 aa16.19■□□□□ 0.18
NDC1-201ENST00000371429 ARFGAP2Q8N6H7 521 aa16.19■□□□□ 0.18
NDC1-201ENST00000371429 KMT5AQ9NQR1 393 aa16.19■□□□□ 0.18
NDC1-201ENST00000371429 HOXC10Q9NYD6 342 aa16.19■□□□□ 0.18
NDC1-201ENST00000371429 PARP2Q9UGN5 583 aa16.19■□□□□ 0.18
NDC1-201ENST00000371429 ATP2C2O75185 946 aa16.19■□□□□ 0.18
NDC1-201ENST00000371429 RNF207Q6ZRF8 634 aa16.19■□□□□ 0.18
NDC1-201ENST00000371429 ODF2LQ9ULJ1 636 aa16.19■□□□□ 0.18
NDC1-201ENST00000371429 TRIM28Q13263 835 aaKnown RBP16.19■□□□□ 0.18
NDC1-201ENST00000371429 PDXDC2PQ6P474 469 aa16.19■□□□□ 0.18
NDC1-201ENST00000371429 PPM1EQ8WY54 764 aa16.19■□□□□ 0.18
NDC1-201ENST00000371429 PSMB7Q99436 277 aa16.19■□□□□ 0.18
NDC1-201ENST00000371429 TRIM31Q9BZY9 425 aa16.19■□□□□ 0.18
NDC1-201ENST00000371429 MIS12Q9H081 205 aa16.19■□□□□ 0.18
NDC1-201ENST00000371429 FAM196BA6NMK8 535 aa16.19■□□□□ 0.18
NDC1-201ENST00000371429 USP17L5A8MUK1 530 aa16.19■□□□□ 0.18
NDC1-201ENST00000371429 MMP1P03956 469 aa16.19■□□□□ 0.18
NDC1-201ENST00000371429 ZNF445P59923 1031 aa16.19■□□□□ 0.18
NDC1-201ENST00000371429 UTP11Q9Y3A2 253 aaKnown RBP16.19■□□□□ 0.18
NDC1-201ENST00000371429 SPATA31A1Q5TZJ5 1347 aa16.19■□□□□ 0.18
NDC1-201ENST00000371429 CPDO75976 1380 aa16.19■□□□□ 0.18
NDC1-201ENST00000371429 GAP43P17677 238 aa16.18■□□□□ 0.18
NDC1-201ENST00000371429 IRX5P78411 483 aaPredicted RBP16.18■□□□□ 0.18
NDC1-201ENST00000371429 SCYL2Q6P3W7 929 aa16.18■□□□□ 0.18
NDC1-201ENST00000371429 TMEM63CQ9P1W3 806 aa16.18■□□□□ 0.18
NDC1-201ENST00000371429 ZSCAN20P17040 1043 aaPredicted RBP16.18■□□□□ 0.18
NDC1-201ENST00000371429 SNAP25P60880 206 aa16.18■□□□□ 0.18
NDC1-201ENST00000371429 MTERF2Q49AM1 385 aa16.18■□□□□ 0.18
NDC1-201ENST00000371429 SMIM5Q71RC9 77 aa16.18■□□□□ 0.18
NDC1-201ENST00000371429 FBXO40Q9UH90 709 aa16.18■□□□□ 0.18
NDC1-201ENST00000371429 IQCA1LA6NCM1 817 aa16.18■□□□□ 0.18
NDC1-201ENST00000371429 PPP2R3AQ06190 1150 aa16.18■□□□□ 0.18
NDC1-201ENST00000371429 DAAM2Q86T65 1068 aa16.18■□□□□ 0.18
NDC1-201ENST00000371429 KRT222Q8N1A0 295 aa16.18■□□□□ 0.18
NDC1-201ENST00000371429 A0A1W2PQ27 194 aa16.18■□□□□ 0.18
NDC1-201ENST00000371429 A0A1W2PQ64 194 aa16.18■□□□□ 0.18
NDC1-201ENST00000371429 A0A1W2PQD8 194 aa16.18■□□□□ 0.18
NDC1-201ENST00000371429 PDE6CP51160 858 aa16.18■□□□□ 0.18
NDC1-201ENST00000371429 BIRC2Q13490 618 aa16.18■□□□□ 0.18
NDC1-201ENST00000371429 RC3H1Q5TC82 1133 aaKnown RBP16.18■□□□□ 0.18
NDC1-201ENST00000371429 EEF2KMTQ96G04 330 aa16.18■□□□□ 0.18
NDC1-201ENST00000371429 PPP6R2O75170 966 aa16.17■□□□□ 0.18
NDC1-201ENST00000371429 KIF23Q02241 960 aaPredicted RBP16.17■□□□□ 0.18
NDC1-201ENST00000371429 SEPT2Q15019 361 aa16.17■□□□□ 0.18
NDC1-201ENST00000371429 TICAM2Q86XR7 235 aa16.17■□□□□ 0.18
NDC1-201ENST00000371429 MARCH10Q8NA82 808 aaPredicted RBP16.17■□□□□ 0.18
NDC1-201ENST00000371429 DCAF4Q8WV16 495 aa16.17■□□□□ 0.18
NDC1-201ENST00000371429 PSAPP07602 524 aa16.17■□□□□ 0.18
NDC1-201ENST00000371429 EVCP57679 992 aa16.17■□□□□ 0.18
NDC1-201ENST00000371429 RNASELQ05823 741 aaKnown RBP16.17■□□□□ 0.18
NDC1-201ENST00000371429 SPP2Q13103 211 aa16.17■□□□□ 0.18
NDC1-201ENST00000371429 FAM83BQ5T0W9 1011 aa16.17■□□□□ 0.18
NDC1-201ENST00000371429 CCDC51Q96ER9 411 aa16.17■□□□□ 0.18
NDC1-201ENST00000371429 MROH7-TTC4A0A0A0MT08 1334 aa16.17■□□□□ 0.18
NDC1-201ENST00000371429 A0A0G2JLW4 131 aa16.17■□□□□ 0.18
NDC1-201ENST00000371429 MEIS1O00470 390 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms