RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 CASP14P31944 242 aa24.2■■□□□ 1.46
TM9SF3-201ENST00000371142 MESDQ14696 234 aa24.2■■□□□ 1.46
TM9SF3-201ENST00000371142 PTPN21Q16825 1174 aa24.2■■□□□ 1.46
TM9SF3-201ENST00000371142 TTC19Q6DKK2 380 aaPredicted RBP24.2■■□□□ 1.46
TM9SF3-201ENST00000371142 KCTD1Q719H9 257 aa24.2■■□□□ 1.46
TM9SF3-201ENST00000371142 WDR46O15213 610 aaKnown RBP24.2■■□□□ 1.46
TM9SF3-201ENST00000371142 PABPC4Q13310 644 aaKnown RBP eCLIP24.2■■□□□ 1.466e-9■■■□□ 16.5
TM9SF3-201ENST00000371142 ZSCAN26Q16670 478 aa24.2■■□□□ 1.46
TM9SF3-201ENST00000371142 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP24.2■■□□□ 1.46
TM9SF3-201ENST00000371142 FAM71BQ8TC56 605 aa24.2■■□□□ 1.46
TM9SF3-201ENST00000371142 ZNF277Q9NRM2 450 aaPredicted RBP24.2■■□□□ 1.46
TM9SF3-201ENST00000371142 ZNF853P0CG23 659 aa24.19■■□□□ 1.46
TM9SF3-201ENST00000371142 LRCH2Q5VUJ6 765 aa24.19■■□□□ 1.46
TM9SF3-201ENST00000371142 ZNF215Q9UL58 517 aaPredicted RBP24.19■■□□□ 1.46
TM9SF3-201ENST00000371142 PCDHB4Q9Y5E5 795 aa24.19■■□□□ 1.46
TM9SF3-201ENST00000371142 ATP7AQ04656 1500 aa24.19■■□□□ 1.46
TM9SF3-201ENST00000371142 ARHGAP27Q6ZUM4 889 aa24.19■■□□□ 1.46
TM9SF3-201ENST00000371142 CAPS2Q9BXY5 557 aa24.19■■□□□ 1.46
TM9SF3-201ENST00000371142 BCAP29Q9UHQ4 241 aa24.19■■□□□ 1.46
TM9SF3-201ENST00000371142 EFCAB8A8MWE9 144 aa24.19■■□□□ 1.46
TM9SF3-201ENST00000371142 TMOD1P28289 359 aa24.19■■□□□ 1.46
TM9SF3-201ENST00000371142 PPP2R5AQ15172 486 aa24.19■■□□□ 1.46
TM9SF3-201ENST00000371142 PPP2R5EQ16537 467 aa24.19■■□□□ 1.46
TM9SF3-201ENST00000371142 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.19■■□□□ 1.46
TM9SF3-201ENST00000371142 ATP10AO60312 1499 aa24.19■■□□□ 1.46
TM9SF3-201ENST00000371142 BAG6P46379 1132 aa24.19■■□□□ 1.46
TM9SF3-201ENST00000371142 CACNB1Q02641 598 aaPredicted RBP24.19■■□□□ 1.46
TM9SF3-201ENST00000371142 GUCY2DQ02846 1103 aa24.19■■□□□ 1.46
TM9SF3-201ENST00000371142 FAM160B1Q5W0V3 765 aa24.19■■□□□ 1.46
TM9SF3-201ENST00000371142 RINT1Q6NUQ1 792 aa24.19■■□□□ 1.46
TM9SF3-201ENST00000371142 RNF8O76064 485 aa24.19■■□□□ 1.46
TM9SF3-201ENST00000371142 PDE8BO95263 885 aa24.19■■□□□ 1.46
TM9SF3-201ENST00000371142 DCPSQ96C86 337 aaKnown RBP24.19■■□□□ 1.46
TM9SF3-201ENST00000371142 POLR2BP30876 1174 aaKnown RBP24.18■■□□□ 1.46
TM9SF3-201ENST00000371142 UBE3CQ15386 1083 aa24.18■■□□□ 1.46
TM9SF3-201ENST00000371142 PROSER3Q2NL68 480 aa24.18■■□□□ 1.46
TM9SF3-201ENST00000371142 RFX6Q8HWS3 928 aa24.18■■□□□ 1.46
TM9SF3-201ENST00000371142 SMYD4Q8IYR2 804 aaPredicted RBP24.18■■□□□ 1.46
TM9SF3-201ENST00000371142 TUBGCP2Q9BSJ2 902 aa24.18■■□□□ 1.46
TM9SF3-201ENST00000371142 PLEKHG3A1L390 1219 aa24.18■■□□□ 1.46
TM9SF3-201ENST00000371142 DYNLL1P63167 89 aaKnown RBP24.18■■□□□ 1.46
TM9SF3-201ENST00000371142 TRIM68Q6AZZ1 485 aa24.18■■□□□ 1.46
TM9SF3-201ENST00000371142 ENC1O14682 589 aa24.18■■□□□ 1.46
TM9SF3-201ENST00000371142 A6NJR5 290 aa24.18■■□□□ 1.46
TM9SF3-201ENST00000371142 LRRC41Q15345 812 aa24.17■■□□□ 1.46
TM9SF3-201ENST00000371142 PCDHA4Q9UN74 947 aa24.17■■□□□ 1.46
TM9SF3-201ENST00000371142 HNRNPDLO14979 420 aaKnown RBP24.17■■□□□ 1.46
TM9SF3-201ENST00000371142 CRKLP46109 303 aaKnown RBP24.17■■□□□ 1.46
TM9SF3-201ENST00000371142 YWHAGP61981 247 aaKnown RBP eCLIP24.17■■□□□ 1.46
TM9SF3-201ENST00000371142 ZNF577Q9BSK1 485 aa24.17■■□□□ 1.46
TM9SF3-201ENST00000371142 MFAP3P55082 362 aa24.17■■□□□ 1.46
TM9SF3-201ENST00000371142 DCLK2Q8N568 766 aa24.17■■□□□ 1.46
TM9SF3-201ENST00000371142 SKA2Q8WVK7 121 aaPredicted RBP24.17■■□□□ 1.46
TM9SF3-201ENST00000371142 MRFAP1L1Q96HT8 127 aa24.17■■□□□ 1.46
TM9SF3-201ENST00000371142 POC1B-GALNT4F8VUJ3 575 aa24.17■■□□□ 1.46
TM9SF3-201ENST00000371142 PPEF1O14829 653 aaPredicted RBP24.17■■□□□ 1.46
TM9SF3-201ENST00000371142 ZBTB24O43167 697 aaPredicted RBP24.17■■□□□ 1.46
TM9SF3-201ENST00000371142 GPR162Q16538 588 aa24.17■■□□□ 1.46
TM9SF3-201ENST00000371142 TLR3O15455 904 aaKnown RBP24.17■■□□□ 1.46
TM9SF3-201ENST00000371142 ETF1P62495 437 aaKnown RBP24.17■■□□□ 1.46
TM9SF3-201ENST00000371142 PTK2Q05397 1052 aa24.17■■□□□ 1.46
TM9SF3-201ENST00000371142 LARP4BQ92615 738 aaKnown RBP24.17■■□□□ 1.46
TM9SF3-201ENST00000371142 DBNLQ9UJU6 430 aaKnown RBP24.17■■□□□ 1.46
TM9SF3-201ENST00000371142 PASKQ96RG2 1323 aa24.17■■□□□ 1.46
TM9SF3-201ENST00000371142 KDM5AP29375 1690 aaKnown RBP24.16■■□□□ 1.46
TM9SF3-201ENST00000371142 MYOM2P54296 1465 aa24.16■■□□□ 1.46
TM9SF3-201ENST00000371142 SESN3P58005 492 aa24.16■■□□□ 1.46
TM9SF3-201ENST00000371142 MIS12Q9H081 205 aa24.16■■□□□ 1.46
TM9SF3-201ENST00000371142 PDE1CQ14123 709 aaPredicted RBP24.16■■□□□ 1.46
TM9SF3-201ENST00000371142 FBXO18Q8NFZ0 1043 aa24.16■■□□□ 1.46
TM9SF3-201ENST00000371142 TRIM56Q9BRZ2 755 aaKnown RBP24.16■■□□□ 1.46
TM9SF3-201ENST00000371142 CCDC68Q9H2F9 335 aa24.16■■□□□ 1.46
TM9SF3-201ENST00000371142 SGK1O00141 431 aa24.16■■□□□ 1.46
TM9SF3-201ENST00000371142 FMNL1O95466 1100 aaPredicted RBP24.16■■□□□ 1.46
TM9SF3-201ENST00000371142 ECE1P42892 770 aa24.16■■□□□ 1.46
TM9SF3-201ENST00000371142 SMYD2Q9NRG4 433 aa24.16■■□□□ 1.46
TM9SF3-201ENST00000371142 AMNQ9BXJ7 453 aa24.16■■□□□ 1.46
TM9SF3-201ENST00000371142 MLH3Q9UHC1 1453 aa24.16■■□□□ 1.46
TM9SF3-201ENST00000371142 NR2F2P24468 414 aa24.16■■□□□ 1.46
TM9SF3-201ENST00000371142 SLC16A2P36021 539 aa24.16■■□□□ 1.46
TM9SF3-201ENST00000371142 CARMIL3Q8ND23 1372 aa24.16■■□□□ 1.46
TM9SF3-201ENST00000371142 AOC3Q16853 763 aa24.15■■□□□ 1.46
TM9SF3-201ENST00000371142 SULF1Q8IWU6 871 aa24.15■■□□□ 1.46
TM9SF3-201ENST00000371142 PCDHA5Q9Y5H7 936 aa24.15■■□□□ 1.46
TM9SF3-201ENST00000371142 TSTA3Q13630 321 aaPredicted RBP24.15■■□□□ 1.46
TM9SF3-201ENST00000371142 MUM1L1Q5H9M0 696 aa24.15■■□□□ 1.46
TM9SF3-201ENST00000371142 RSPH3Q86UC2 560 aa24.15■■□□□ 1.46
TM9SF3-201ENST00000371142 UNC5CLQ8IV45 518 aa24.15■■□□□ 1.46
TM9SF3-201ENST00000371142 DDX27Q96GQ7 796 aaKnown RBP24.15■■□□□ 1.46
TM9SF3-201ENST00000371142 PPP1R13BQ96KQ4 1090 aa24.15■■□□□ 1.46
TM9SF3-201ENST00000371142 JADE1Q6IE81 842 aa24.15■■□□□ 1.46
TM9SF3-201ENST00000371142 DPY19L2Q6NUT2 758 aa24.15■■□□□ 1.46
TM9SF3-201ENST00000371142 RASEFQ8IZ41 740 aa24.15■■□□□ 1.46
TM9SF3-201ENST00000371142 KIF22Q14807 665 aa24.14■■□□□ 1.46
TM9SF3-201ENST00000371142 ZMYM1Q5SVZ6 1142 aa24.14■■□□□ 1.46
TM9SF3-201ENST00000371142 KCTD16Q68DU8 428 aa24.14■■□□□ 1.46
TM9SF3-201ENST00000371142 ZNF589Q86UQ0 364 aaPredicted RBP24.14■■□□□ 1.46
TM9SF3-201ENST00000371142 NT5C1BQ96P26 610 aa24.14■■□□□ 1.46
TM9SF3-201ENST00000371142 CSRNP1Q96S65 589 aa24.14■■□□□ 1.46
TM9SF3-201ENST00000371142 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.14■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms