RNA–Protein interactions for RNA: ENST00000371039.5

SGIP1-204, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SGIP1, Length 4,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-204ENST00000371039 SKIDA1Q1XH10 827 aa5.36□□□□□ -1.55
SGIP1-204ENST00000371039 KLHDC7AQ5VTJ3 777 aa5.36□□□□□ -1.55
SGIP1-204ENST00000371039 KRT28Q7Z3Y7 464 aa5.36□□□□□ -1.55
SGIP1-204ENST00000371039 TMC4Q7Z404 712 aa5.36□□□□□ -1.55
SGIP1-204ENST00000371039 ZBTB38Q8NAP3 1195 aaPredicted RBP5.36□□□□□ -1.55
SGIP1-204ENST00000371039 SDR42E1Q8WUS8 393 aa5.36□□□□□ -1.55
SGIP1-204ENST00000371039 NELFBQ8WX92 580 aa5.36□□□□□ -1.55
SGIP1-204ENST00000371039 ZKSCAN4Q969J2 545 aaPredicted RBP5.36□□□□□ -1.55
SGIP1-204ENST00000371039 FAXDC2Q96IV6 333 aa5.36□□□□□ -1.55
SGIP1-204ENST00000371039 CEP89Q96ST8 783 aa5.36□□□□□ -1.55
SGIP1-204ENST00000371039 NUCKS1Q9H1E3 243 aaKnown RBP5.36□□□□□ -1.55
SGIP1-204ENST00000371039 SEMA6BQ9H3T3 888 aa5.36□□□□□ -1.55
SGIP1-204ENST00000371039 BRMS1Q9HCU9 246 aa5.36□□□□□ -1.55
SGIP1-204ENST00000371039 KCNMB3Q9NPA1 279 aa5.36□□□□□ -1.55
SGIP1-204ENST00000371039 GNL3LQ9NVN8 582 aaKnown RBP5.36□□□□□ -1.55
SGIP1-204ENST00000371039 SLC12A6Q9UHW9 1150 aa5.36□□□□□ -1.55
SGIP1-204ENST00000371039 TMEM59LQ9UK28 342 aa5.36□□□□□ -1.55
SGIP1-204ENST00000371039 SYNPO2Q9UMS6 1093 aa5.36□□□□□ -1.55
SGIP1-204ENST00000371039 ATXN2Q99700 1313 aaKnown RBP5.36□□□□□ -1.55
SGIP1-204ENST00000371039 COL5A3P25940 1745 aaPredicted RBP5.36□□□□□ -1.55
SGIP1-204ENST00000371039 A0A087WUV0 522 aaPredicted RBP5.36□□□□□ -1.55
SGIP1-204ENST00000371039 B4DLN1 442 aa5.36□□□□□ -1.55
SGIP1-204ENST00000371039 CREB3O43889 395 aa5.36□□□□□ -1.55
SGIP1-204ENST00000371039 FSBPO95073 299 aa5.36□□□□□ -1.55
SGIP1-204ENST00000371039 TATP17735 454 aaPredicted RBP5.36□□□□□ -1.55
SGIP1-204ENST00000371039 CARSP49589 748 aaKnown RBP5.36□□□□□ -1.55
SGIP1-204ENST00000371039 MCCD1P59942 119 aaPredicted RBP5.36□□□□□ -1.55
SGIP1-204ENST00000371039 SSRP1Q08945 709 aaKnown RBP5.36□□□□□ -1.55
SGIP1-204ENST00000371039 CYP26C1Q6V0L0 522 aa5.36□□□□□ -1.55
SGIP1-204ENST00000371039 DNAAF5Q86Y56 855 aa5.36□□□□□ -1.55
SGIP1-204ENST00000371039 CNGA4Q8IV77 575 aa5.36□□□□□ -1.55
SGIP1-204ENST00000371039 MICALL1Q8N3F8 863 aa5.36□□□□□ -1.55
SGIP1-204ENST00000371039 JMYQ8N9B5 988 aa5.36□□□□□ -1.55
SGIP1-204ENST00000371039 SPATA4Q8NEY3 305 aa5.36□□□□□ -1.55
SGIP1-204ENST00000371039 LPIN2Q92539 896 aa5.36□□□□□ -1.55
SGIP1-204ENST00000371039 CCDC102AQ96A19 550 aa5.36□□□□□ -1.55
SGIP1-204ENST00000371039 CCDC51Q96ER9 411 aa5.36□□□□□ -1.55
SGIP1-204ENST00000371039 FGFBP2Q9BYJ0 223 aa5.36□□□□□ -1.55
SGIP1-204ENST00000371039 TMX4Q9H1E5 349 aaPredicted RBP5.36□□□□□ -1.55
SGIP1-204ENST00000371039 NHEJ1Q9H9Q4 299 aaPredicted RBP5.36□□□□□ -1.55
SGIP1-204ENST00000371039 GDF3Q9NR23 364 aa5.36□□□□□ -1.55
SGIP1-204ENST00000371039 KBTBD4Q9NVX7 518 aa5.36□□□□□ -1.55
SGIP1-204ENST00000371039 TBC1D2BQ9UPU7 963 aa5.36□□□□□ -1.55
SGIP1-204ENST00000371039 PNPLA7Q6ZV29 1317 aa5.36□□□□□ -1.55
SGIP1-204ENST00000371039 ESYT3A0FGR9 886 aa5.35□□□□□ -1.55
SGIP1-204ENST00000371039 NUTM2BA6NNL0 878 aaPredicted RBP5.35□□□□□ -1.55
SGIP1-204ENST00000371039 NUTM2EB1AL46 878 aaPredicted RBP5.35□□□□□ -1.55
SGIP1-204ENST00000371039 CYTH3O43739 400 aa5.35□□□□□ -1.55
SGIP1-204ENST00000371039 RTN2O75298 545 aa5.35□□□□□ -1.55
SGIP1-204ENST00000371039 TNFRSF8P28908 595 aa5.35□□□□□ -1.55
SGIP1-204ENST00000371039 GUCY1A3Q02108 690 aa5.35□□□□□ -1.55
SGIP1-204ENST00000371039 STK4Q13043 487 aa5.35□□□□□ -1.55
SGIP1-204ENST00000371039 ITGB3BPQ13352 177 aaPredicted RBP5.35□□□□□ -1.55
SGIP1-204ENST00000371039 IRF5Q13568 498 aa5.35□□□□□ -1.55
SGIP1-204ENST00000371039 STIM1Q13586 685 aa5.35□□□□□ -1.55
SGIP1-204ENST00000371039 ZNF658Q5TYW1 1059 aaPredicted RBP5.35□□□□□ -1.55
SGIP1-204ENST00000371039 ANKRD40Q6AI12 368 aa5.35□□□□□ -1.55
SGIP1-204ENST00000371039 MCTP2Q6DN12 878 aa5.35□□□□□ -1.55
SGIP1-204ENST00000371039 C3orf67Q6ZVT6 689 aa5.35□□□□□ -1.55
SGIP1-204ENST00000371039 CAVIN3Q969G5 261 aa5.35□□□□□ -1.55
SGIP1-204ENST00000371039 MCM8Q9UJA3 840 aa5.35□□□□□ -1.55
SGIP1-204ENST00000371039 ASAP1Q9ULH1 1129 aa5.35□□□□□ -1.55
SGIP1-204ENST00000371039 CTDP1Q9Y5B0 961 aaPredicted RBP5.35□□□□□ -1.55
SGIP1-204ENST00000371039 SAR1BQ9Y6B6 198 aa5.35□□□□□ -1.55
SGIP1-204ENST00000371039 FOCADQ5VW36 1801 aa5.35□□□□□ -1.55
SGIP1-204ENST00000371039 A0A1W2PQC6 194 aa5.35□□□□□ -1.55
SGIP1-204ENST00000371039 DEXIO95424 95 aa5.35□□□□□ -1.55
SGIP1-204ENST00000371039 FCER1AP12319 257 aa5.35□□□□□ -1.55
SGIP1-204ENST00000371039 ABCD1P33897 745 aa5.35□□□□□ -1.55
SGIP1-204ENST00000371039 DDR1Q08345 913 aa5.35□□□□□ -1.55
SGIP1-204ENST00000371039 KCNMA1Q12791 1236 aa5.35□□□□□ -1.55
SGIP1-204ENST00000371039 C11orf91Q3C1V1 193 aa5.35□□□□□ -1.55
SGIP1-204ENST00000371039 WLSQ5T9L3 541 aa5.35□□□□□ -1.55
SGIP1-204ENST00000371039 MAGEB6Q8N7X4 407 aa5.35□□□□□ -1.55
SGIP1-204ENST00000371039 GIMAP8Q8ND71 665 aaPredicted RBP5.35□□□□□ -1.55
SGIP1-204ENST00000371039 MORC4Q8TE76 937 aa5.35□□□□□ -1.55
SGIP1-204ENST00000371039 PPM1EQ8WY54 764 aa5.35□□□□□ -1.55
SGIP1-204ENST00000371039 AIDAQ96BJ3 306 aa5.35□□□□□ -1.55
SGIP1-204ENST00000371039 SH2D4AQ9H788 454 aa5.35□□□□□ -1.55
SGIP1-204ENST00000371039 MAGEC2Q9UBF1 373 aaPredicted RBP5.35□□□□□ -1.55
SGIP1-204ENST00000371039 LRWD1Q9UFC0 647 aa5.35□□□□□ -1.55
SGIP1-204ENST00000371039 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.35□□□□□ -1.55
SGIP1-204ENST00000371039 F8W031 263 aaPredicted RBP5.35□□□□□ -1.55
SGIP1-204ENST00000371039 KIF3CO14782 793 aa5.35□□□□□ -1.55
SGIP1-204ENST00000371039 OPLAHO14841 1288 aa5.35□□□□□ -1.55
SGIP1-204ENST00000371039 HDLBPQ00341 1268 aaKnown RBP5.35□□□□□ -1.55
SGIP1-204ENST00000371039 EHHADHQ08426 723 aa5.35□□□□□ -1.55
SGIP1-204ENST00000371039 NAA35Q5VZE5 725 aa5.35□□□□□ -1.55
SGIP1-204ENST00000371039 IRF2BPLQ9H1B7 796 aa5.35□□□□□ -1.55
SGIP1-204ENST00000371039 ADAM7Q9H2U9 754 aa5.35□□□□□ -1.55
SGIP1-204ENST00000371039 NENFQ9UMX5 172 aa5.35□□□□□ -1.55
SGIP1-204ENST00000371039 TNKSO95271 1327 aa5.35□□□□□ -1.55
SGIP1-204ENST00000371039 IRS2Q9Y4H2 1338 aa5.35□□□□□ -1.55
SGIP1-204ENST00000371039 IFIT3O14879 490 aaKnown RBP5.34□□□□□ -1.55
SGIP1-204ENST00000371039 C21orf2O43822 256 aa5.34□□□□□ -1.55
SGIP1-204ENST00000371039 ZEB2O60315 1214 aa5.34□□□□□ -1.55
SGIP1-204ENST00000371039 RPN1P04843 607 aaKnown RBP5.34□□□□□ -1.55
SGIP1-204ENST00000371039 FAM200BP0CF97 657 aa5.34□□□□□ -1.55
SGIP1-204ENST00000371039 CTSWP56202 376 aa5.34□□□□□ -1.55
SGIP1-204ENST00000371039 ITIH3Q06033 890 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms