RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 KIAA1211Q6ZU35 1233 aa15.49■□□□□ 0.07
RPF1-201ENST00000370654 TBC1D5Q92609 795 aa15.49■□□□□ 0.07
RPF1-201ENST00000370654 TRPV6Q9H1D0 765 aa15.49■□□□□ 0.07
RPF1-201ENST00000370654 PTPDC1A2A3K4 754 aa15.48■□□□□ 0.07
RPF1-201ENST00000370654 PBX2P40425 430 aa15.48■□□□□ 0.07
RPF1-201ENST00000370654 ITGA7Q13683 1181 aa15.48■□□□□ 0.07
RPF1-201ENST00000370654 ZNF365Q70YC5 407 aa15.48■□□□□ 0.07
RPF1-201ENST00000370654 TICAM2Q86XR7 235 aa15.48■□□□□ 0.07
RPF1-201ENST00000370654 VWCEQ96DN2 955 aa15.48■□□□□ 0.07
RPF1-201ENST00000370654 TTC14Q96N46 770 aa15.48■□□□□ 0.07
RPF1-201ENST00000370654 AP5M1Q9H0R1 490 aa15.48■□□□□ 0.07
RPF1-201ENST00000370654 VTA1Q9NP79 307 aa15.48■□□□□ 0.07
RPF1-201ENST00000370654 MROH7Q68CQ1 1323 aa15.47■□□□□ 0.07
RPF1-201ENST00000370654 B4E1Z4 1266 aa15.47■□□□□ 0.07
RPF1-201ENST00000370654 B4GALT4O60513 344 aa15.47■□□□□ 0.07
RPF1-201ENST00000370654 KDM4AO75164 1064 aa15.47■□□□□ 0.07
RPF1-201ENST00000370654 PDE4AP27815 886 aa15.47■□□□□ 0.07
RPF1-201ENST00000370654 RPS6P62753 249 aaKnown RBP15.47■□□□□ 0.07
RPF1-201ENST00000370654 GRIN2CQ14957 1233 aa15.47■□□□□ 0.07
RPF1-201ENST00000370654 RASIP1Q5U651 963 aa15.47■□□□□ 0.07
RPF1-201ENST00000370654 COPS5Q92905 334 aa15.47■□□□□ 0.07
RPF1-201ENST00000370654 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.46■□□□□ 0.07
RPF1-201ENST00000370654 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.46■□□□□ 0.07
RPF1-201ENST00000370654 RBM47A0AV96 593 aaKnown RBP15.46■□□□□ 0.07
RPF1-201ENST00000370654 ZNF213O14771 459 aa15.46■□□□□ 0.07
RPF1-201ENST00000370654 DNAJB2P25686 324 aa15.46■□□□□ 0.07
RPF1-201ENST00000370654 USH1GQ495M9 461 aa15.46■□□□□ 0.07
RPF1-201ENST00000370654 DUSP28Q4G0W2 176 aa15.46■□□□□ 0.07
RPF1-201ENST00000370654 RNF207Q6ZRF8 634 aa15.46■□□□□ 0.07
RPF1-201ENST00000370654 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.46■□□□□ 0.07
RPF1-201ENST00000370654 COL25A1Q9BXS0 654 aaPredicted RBP15.46■□□□□ 0.07
RPF1-201ENST00000370654 WDR11Q9BZH6 1224 aa15.46■□□□□ 0.07
RPF1-201ENST00000370654 WNT8AQ9H1J5 351 aa15.46■□□□□ 0.07
RPF1-201ENST00000370654 CXXC1Q9P0U4 656 aaPredicted RBP15.46■□□□□ 0.07
RPF1-201ENST00000370654 Q9Y3F1 56 aa15.46■□□□□ 0.07
RPF1-201ENST00000370654 LAMA4Q16363 1823 aa15.46■□□□□ 0.06
RPF1-201ENST00000370654 TLR3O15455 904 aaKnown RBP15.45■□□□□ 0.06
RPF1-201ENST00000370654 CCL23P55773 120 aa15.45■□□□□ 0.06
RPF1-201ENST00000370654 PPIGQ13427 754 aaKnown RBP eCLIP15.45■□□□□ 0.06
RPF1-201ENST00000370654 DGKHQ86XP1 1220 aa15.45■□□□□ 0.06
RPF1-201ENST00000370654 MAFAQ8NHW3 353 aaPredicted RBP15.45■□□□□ 0.06
RPF1-201ENST00000370654 ESR2Q92731 530 aa15.45■□□□□ 0.06
RPF1-201ENST00000370654 NOC4LQ9BVI4 516 aaKnown RBP15.45■□□□□ 0.06
RPF1-201ENST00000370654 ZSWIM5Q9P217 1185 aa15.45■□□□□ 0.06
RPF1-201ENST00000370654 COL20A1Q9P218 1284 aa15.45■□□□□ 0.06
RPF1-201ENST00000370654 CABYRO75952 493 aa15.44■□□□□ 0.06
RPF1-201ENST00000370654 ARIH2O95376 493 aa15.44■□□□□ 0.06
RPF1-201ENST00000370654 PCP11498 1178 aaKnown RBP15.44■□□□□ 0.06
RPF1-201ENST00000370654 EDNRBP24530 442 aa15.44■□□□□ 0.06
RPF1-201ENST00000370654 AAMPQ13685 434 aa15.44■□□□□ 0.06
RPF1-201ENST00000370654 TMEM199Q8N511 208 aa15.44■□□□□ 0.06
RPF1-201ENST00000370654 ENAHQ8N8S7 591 aaPredicted RBP15.44■□□□□ 0.06
RPF1-201ENST00000370654 PNMA1Q8ND90 353 aa15.44■□□□□ 0.06
RPF1-201ENST00000370654 ANKS1AQ92625 1134 aa15.44■□□□□ 0.06
RPF1-201ENST00000370654 PBX4Q9BYU1 374 aa15.44■□□□□ 0.06
RPF1-201ENST00000370654 HIPK3Q9H422 1215 aa15.44■□□□□ 0.06
RPF1-201ENST00000370654 RNF41Q9H4P4 317 aaPredicted RBP15.44■□□□□ 0.06
RPF1-201ENST00000370654 DIAPH3Q9NSV4 1193 aa15.44■□□□□ 0.06
RPF1-201ENST00000370654 TRMT13Q9NUP7 481 aaKnown RBP15.44■□□□□ 0.06
RPF1-201ENST00000370654 ADD3Q9UEY8 706 aaKnown RBP15.44■□□□□ 0.06
RPF1-201ENST00000370654 WDR19Q8NEZ3 1342 aa15.44■□□□□ 0.06
RPF1-201ENST00000370654 CYP2C9P11712 490 aa15.43■□□□□ 0.06
RPF1-201ENST00000370654 GSPT1P15170 499 aaKnown RBP15.43■□□□□ 0.06
RPF1-201ENST00000370654 PURAQ00577 322 aaKnown RBP15.43■□□□□ 0.06
RPF1-201ENST00000370654 CDC37Q16543 378 aaPredicted RBP15.43■□□□□ 0.06
RPF1-201ENST00000370654 ADGRF4Q8IZF3 695 aa15.43■□□□□ 0.06
RPF1-201ENST00000370654 USP38Q8NB14 1042 aa15.43■□□□□ 0.06
RPF1-201ENST00000370654 OR6J1Q8NGC5 347 aa15.43■□□□□ 0.06
RPF1-201ENST00000370654 SCLYQ96I15 445 aa15.43■□□□□ 0.06
RPF1-201ENST00000370654 ZSCAN10Q96SZ4 725 aaPredicted RBP15.43■□□□□ 0.06
RPF1-201ENST00000370654 DSCC1Q9BVC3 393 aa15.43■□□□□ 0.06
RPF1-201ENST00000370654 ALDH8A1Q9H2A2 487 aaPredicted RBP15.43■□□□□ 0.06
RPF1-201ENST00000370654 ZNF576Q9H609 170 aa15.43■□□□□ 0.06
RPF1-201ENST00000370654 IL23AQ9NPF7 189 aa15.43■□□□□ 0.06
RPF1-201ENST00000370654 PRUNE2Q8WUY3 3088 aa15.43■□□□□ 0.06
RPF1-201ENST00000370654 ZEB2O60315 1214 aa15.42■□□□□ 0.06
RPF1-201ENST00000370654 MYL3P08590 195 aa15.42■□□□□ 0.06
RPF1-201ENST00000370654 FOSL2P15408 326 aa15.42■□□□□ 0.06
RPF1-201ENST00000370654 MFAP1P55081 439 aaKnown RBP15.42■□□□□ 0.06
RPF1-201ENST00000370654 PDE4DQ08499 809 aa15.42■□□□□ 0.06
RPF1-201ENST00000370654 GPATCH4Q5T3I0 446 aaKnown RBP15.42■□□□□ 0.06
RPF1-201ENST00000370654 CYB5R4Q7L1T6 521 aa15.42■□□□□ 0.06
RPF1-201ENST00000370654 HERVK_113Q902F9 699 aa15.42■□□□□ 0.06
RPF1-201ENST00000370654 TIFAQ96CG3 184 aa15.42■□□□□ 0.06
RPF1-201ENST00000370654 TAAR1Q96RJ0 339 aa15.42■□□□□ 0.06
RPF1-201ENST00000370654 TAF6LQ9Y6J9 622 aa15.42■□□□□ 0.06
RPF1-201ENST00000370654 SLC35G1Q2M3R5 365 aa15.41■□□□□ 0.06
RPF1-201ENST00000370654 QRICH1Q2TAL8 776 aa15.41■□□□□ 0.06
RPF1-201ENST00000370654 OTOP2Q7RTS6 562 aa15.41■□□□□ 0.06
RPF1-201ENST00000370654 STAG2Q8N3U4 1231 aa15.41■□□□□ 0.06
RPF1-201ENST00000370654 SYTL5Q8TDW5 730 aaPredicted RBP15.41■□□□□ 0.06
RPF1-201ENST00000370654 KAT14Q9H8E8 782 aa15.41■□□□□ 0.06
RPF1-201ENST00000370654 JMJD4Q9H9V9 463 aa15.41■□□□□ 0.06
RPF1-201ENST00000370654 VAT1LQ9HCJ6 419 aa15.41■□□□□ 0.06
RPF1-201ENST00000370654 YBX2Q9Y2T7 364 aaKnown RBP15.41■□□□□ 0.06
RPF1-201ENST00000370654 SUPT16HQ9Y5B9 1047 aaKnown RBP15.41■□□□□ 0.06
RPF1-201ENST00000370654 TNKSO95271 1327 aa15.41■□□□□ 0.06
RPF1-201ENST00000370654 VCANP13611 3396 aa15.4■□□□□ 0.06
RPF1-201ENST00000370654 TMEM265A0A087WTH1 108 aa15.4■□□□□ 0.06
RPF1-201ENST00000370654 OPLAHO14841 1288 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms