RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.93□□□□□ -1.14
TGFBR3-202ENST00000370399 B4DLN1 442 aa7.93□□□□□ -1.14
TGFBR3-202ENST00000370399 ERCC5P28715 1186 aaPredicted RBP7.93□□□□□ -1.14
TGFBR3-202ENST00000370399 ATP2C1P98194 919 aaPredicted RBP7.93□□□□□ -1.14
TGFBR3-202ENST00000370399 ARL6IP4Q66PJ3 421 aaKnown RBP7.93□□□□□ -1.14
TGFBR3-202ENST00000370399 MYOCDQ8IZQ8 938 aa7.93□□□□□ -1.14
TGFBR3-202ENST00000370399 CARD6Q9BX69 1037 aa7.93□□□□□ -1.14
TGFBR3-202ENST00000370399 NT5C3AQ9H0P0 336 aa7.93□□□□□ -1.14
TGFBR3-202ENST00000370399 CENPHQ9H3R5 247 aa7.93□□□□□ -1.14
TGFBR3-202ENST00000370399 AP5Z1O43299 807 aa7.93□□□□□ -1.14
TGFBR3-202ENST00000370399 PKN1Q16512 942 aa7.93□□□□□ -1.14
TGFBR3-202ENST00000370399 RRAGAQ7L523 313 aa7.93□□□□□ -1.14
TGFBR3-202ENST00000370399 CCDC102AQ96A19 550 aa7.93□□□□□ -1.14
TGFBR3-202ENST00000370399 FAM212AQ96EL1 285 aa7.93□□□□□ -1.14
TGFBR3-202ENST00000370399 DDX4Q9NQI0 724 aaKnown RBP7.93□□□□□ -1.14
TGFBR3-202ENST00000370399 MRPL11Q9Y3B7 192 aaKnown RBP7.93□□□□□ -1.14
TGFBR3-202ENST00000370399 DDTLA6NHG4 134 aaPredicted RBP7.93□□□□□ -1.14
TGFBR3-202ENST00000370399 POLR3GO15318 223 aaPredicted RBP7.93□□□□□ -1.14
TGFBR3-202ENST00000370399 RRP9O43818 475 aaKnown RBP7.93□□□□□ -1.14
TGFBR3-202ENST00000370399 KRT13P13646 458 aa7.93□□□□□ -1.14
TGFBR3-202ENST00000370399 TM4SF1P30408 202 aa7.93□□□□□ -1.14
TGFBR3-202ENST00000370399 NF2P35240 595 aa7.93□□□□□ -1.14
TGFBR3-202ENST00000370399 COPB1P53618 953 aaKnown RBP7.93□□□□□ -1.14
TGFBR3-202ENST00000370399 ZNF543Q08ER8 600 aa7.93□□□□□ -1.14
TGFBR3-202ENST00000370399 LRCH2Q5VUJ6 765 aa7.93□□□□□ -1.14
TGFBR3-202ENST00000370399 ZFPM1Q8IX07 1006 aa7.93□□□□□ -1.14
TGFBR3-202ENST00000370399 ZNF579Q8NAF0 562 aaKnown RBP7.93□□□□□ -1.14
TGFBR3-202ENST00000370399 TUBGCP2Q9BSJ2 902 aa7.93□□□□□ -1.14
TGFBR3-202ENST00000370399 TMEM39BQ9GZU3 492 aa7.93□□□□□ -1.14
TGFBR3-202ENST00000370399 MAD2L2Q9UI95 211 aa7.93□□□□□ -1.14
TGFBR3-202ENST00000370399 CTAGE9A4FU28 777 aa7.92□□□□□ -1.14
TGFBR3-202ENST00000370399 PSMD14O00487 310 aa7.92□□□□□ -1.14
TGFBR3-202ENST00000370399 TEX33O43247 280 aa7.92□□□□□ -1.14
TGFBR3-202ENST00000370399 KRT86O43790 486 aa7.92□□□□□ -1.14
TGFBR3-202ENST00000370399 STAT3P40763 770 aa7.92□□□□□ -1.14
TGFBR3-202ENST00000370399 PRCPP42785 496 aa7.92□□□□□ -1.14
TGFBR3-202ENST00000370399 PAFAH1B1P43034 410 aa7.92□□□□□ -1.14
TGFBR3-202ENST00000370399 RNASE9P60153 205 aaKnown RBP7.92□□□□□ -1.14
TGFBR3-202ENST00000370399 FMR1Q06787 632 aaKnown RBP eCLIP7.92□□□□□ -1.14
TGFBR3-202ENST00000370399 PPP4R3AQ6IN85 833 aa7.92□□□□□ -1.14
TGFBR3-202ENST00000370399 TYW1BQ6NUM6 668 aa7.92□□□□□ -1.14
TGFBR3-202ENST00000370399 PIGOQ8TEQ8 1089 aa7.92□□□□□ -1.14
TGFBR3-202ENST00000370399 NDUFB10O96000 172 aa7.92□□□□□ -1.14
TGFBR3-202ENST00000370399 RHOXF2BP0C7M4 288 aa7.92□□□□□ -1.14
TGFBR3-202ENST00000370399 RBL2Q08999 1139 aa7.92□□□□□ -1.14
TGFBR3-202ENST00000370399 SPP2Q13103 211 aa7.92□□□□□ -1.14
TGFBR3-202ENST00000370399 ZNF658Q5TYW1 1059 aaPredicted RBP7.92□□□□□ -1.14
TGFBR3-202ENST00000370399 ANKRD13CQ8N6S4 541 aa7.92□□□□□ -1.14
TGFBR3-202ENST00000370399 RHOXF2Q9BQY4 288 aa7.92□□□□□ -1.14
TGFBR3-202ENST00000370399 SH3GLB2Q9NR46 395 aa7.92□□□□□ -1.14
TGFBR3-202ENST00000370399 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.92□□□□□ -1.14
TGFBR3-202ENST00000370399 SALL1Q9NSC2 1324 aa7.92□□□□□ -1.14
TGFBR3-202ENST00000370399 LMO7Q8WWI1 1683 aa7.92□□□□□ -1.14
TGFBR3-202ENST00000370399 E9PMD0 336 aa7.92□□□□□ -1.14
TGFBR3-202ENST00000370399 LAD1O00515 517 aa7.92□□□□□ -1.14
TGFBR3-202ENST00000370399 EIF2AK2P19525 551 aaKnown RBP7.92□□□□□ -1.14
TGFBR3-202ENST00000370399 CYP2J2P51589 502 aa7.92□□□□□ -1.14
TGFBR3-202ENST00000370399 RASA3Q14644 834 aa7.92□□□□□ -1.14
TGFBR3-202ENST00000370399 IL17RAQ96F46 866 aa7.92□□□□□ -1.14
TGFBR3-202ENST00000370399 CNOT6LQ96LI5 555 aaKnown RBP7.92□□□□□ -1.14
TGFBR3-202ENST00000370399 AK8Q96MA6 479 aa7.92□□□□□ -1.14
TGFBR3-202ENST00000370399 STXBP3O00186 592 aa7.91□□□□□ -1.14
TGFBR3-202ENST00000370399 ERLIN1O75477 346 aa7.91□□□□□ -1.14
TGFBR3-202ENST00000370399 ASNSP08243 561 aa7.91□□□□□ -1.14
TGFBR3-202ENST00000370399 TAL1P17542 331 aaPredicted RBP7.91□□□□□ -1.14
TGFBR3-202ENST00000370399 RPL13P26373 211 aaKnown RBP7.91□□□□□ -1.14
TGFBR3-202ENST00000370399 KRT83P78385 493 aa7.91□□□□□ -1.14
TGFBR3-202ENST00000370399 ELF2Q15723 593 aa7.91□□□□□ -1.14
TGFBR3-202ENST00000370399 PTPROQ16827 1216 aa7.91□□□□□ -1.14
TGFBR3-202ENST00000370399 HHIPL2Q6UWX4 724 aa7.91□□□□□ -1.14
TGFBR3-202ENST00000370399 MIER3Q7Z3K6 550 aa7.91□□□□□ -1.14
TGFBR3-202ENST00000370399 TXLNBQ8N3L3 684 aa7.91□□□□□ -1.14
TGFBR3-202ENST00000370399 MYRIPQ8NFW9 859 aa7.91□□□□□ -1.14
TGFBR3-202ENST00000370399 OR8K1Q8NGG5 319 aa7.91□□□□□ -1.14
TGFBR3-202ENST00000370399 SPZ1Q9BXG8 430 aa7.91□□□□□ -1.14
TGFBR3-202ENST00000370399 BHMT2Q9H2M3 363 aa7.91□□□□□ -1.14
TGFBR3-202ENST00000370399 ZNF215Q9UL58 517 aaPredicted RBP7.91□□□□□ -1.14
TGFBR3-202ENST00000370399 TACC3Q9Y6A5 838 aa7.91□□□□□ -1.14
TGFBR3-202ENST00000370399 POTEB3A0JP26 581 aa7.91□□□□□ -1.14
TGFBR3-202ENST00000370399 POTECB2RU33 542 aa7.91□□□□□ -1.14
TGFBR3-202ENST00000370399 EXOC3O60645 756 aa7.91□□□□□ -1.14
TGFBR3-202ENST00000370399 IGSF3O75054 1194 aa7.91□□□□□ -1.14
TGFBR3-202ENST00000370399 FOSP01100 380 aaPredicted RBP7.91□□□□□ -1.14
TGFBR3-202ENST00000370399 IL1R1P14778 569 aa7.91□□□□□ -1.14
TGFBR3-202ENST00000370399 ARHGAP4P98171 946 aa7.91□□□□□ -1.14
TGFBR3-202ENST00000370399 CTTNQ14247 550 aaKnown RBP7.91□□□□□ -1.14
TGFBR3-202ENST00000370399 ARHGEF16Q5VV41 709 aa7.91□□□□□ -1.14
TGFBR3-202ENST00000370399 TAF3Q5VWG9 929 aa7.91□□□□□ -1.14
TGFBR3-202ENST00000370399 RCSD1Q6JBY9 416 aa7.91□□□□□ -1.14
TGFBR3-202ENST00000370399 TMED8Q6PL24 325 aaPredicted RBP7.91□□□□□ -1.14
TGFBR3-202ENST00000370399 POTEBQ6S5H4 581 aa7.91□□□□□ -1.14
TGFBR3-202ENST00000370399 CYP26C1Q6V0L0 522 aa7.91□□□□□ -1.14
TGFBR3-202ENST00000370399 CERS5Q8N5B7 392 aa7.91□□□□□ -1.14
TGFBR3-202ENST00000370399 ALS2CR12Q96Q35 445 aa7.91□□□□□ -1.14
TGFBR3-202ENST00000370399 MAP3K14Q99558 947 aa7.91□□□□□ -1.14
TGFBR3-202ENST00000370399 SH2D3AQ9BRG2 576 aa7.91□□□□□ -1.14
TGFBR3-202ENST00000370399 FUCA2Q9BTY2 467 aa7.91□□□□□ -1.14
TGFBR3-202ENST00000370399 GINS2Q9Y248 185 aa7.91□□□□□ -1.14
TGFBR3-202ENST00000370399 PPP2R2CQ9Y2T4 447 aa7.91□□□□□ -1.14
TGFBR3-202ENST00000370399 SUGT1Q9Y2Z0 365 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms