RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 SWAP70Q9UH65 585 aa9.36□□□□□ -0.91
ABCA4-201ENST00000370225 KCNG1Q9UIX4 513 aa9.36□□□□□ -0.91
ABCA4-201ENST00000370225 KRIT1O00522 736 aa9.36□□□□□ -0.91
ABCA4-201ENST00000370225 MMP10P09238 476 aa9.36□□□□□ -0.91
ABCA4-201ENST00000370225 KIF11P52732 1056 aa9.36□□□□□ -0.91
ABCA4-201ENST00000370225 SCARA5Q6ZMJ2 495 aa9.36□□□□□ -0.91
ABCA4-201ENST00000370225 GANCQ8TET4 914 aa9.36□□□□□ -0.91
ABCA4-201ENST00000370225 ATP2A3Q93084 1043 aa9.36□□□□□ -0.91
ABCA4-201ENST00000370225 ANTXR1Q9H6X2 564 aa9.36□□□□□ -0.91
ABCA4-201ENST00000370225 CASP2P42575 452 aa9.36□□□□□ -0.91
ABCA4-201ENST00000370225 ZNF341Q9BYN7 854 aa9.36□□□□□ -0.91
ABCA4-201ENST00000370225 COL4A3BPQ9Y5P4 624 aa9.36□□□□□ -0.91
ABCA4-201ENST00000370225 SAMD9Q5K651 1589 aa9.36□□□□□ -0.91
ABCA4-201ENST00000370225 ZNF335Q9H4Z2 1342 aaPredicted RBP9.36□□□□□ -0.91
ABCA4-201ENST00000370225 USP17L3A6NCW0 530 aa9.36□□□□□ -0.91
ABCA4-201ENST00000370225 USP17L4A6NCW7 530 aa9.36□□□□□ -0.91
ABCA4-201ENST00000370225 PPFIA1Q13136 1202 aa9.36□□□□□ -0.91
ABCA4-201ENST00000370225 USP17L1Q7RTZ2 530 aa9.36□□□□□ -0.91
ABCA4-201ENST00000370225 CCDC84Q86UT8 332 aaPredicted RBP9.36□□□□□ -0.91
ABCA4-201ENST00000370225 FAM149B1Q96BN6 582 aa9.36□□□□□ -0.91
ABCA4-201ENST00000370225 CEP170P1Q96L14 293 aa9.36□□□□□ -0.91
ABCA4-201ENST00000370225 FAM49AQ9H0Q0 323 aaPredicted RBP9.36□□□□□ -0.91
ABCA4-201ENST00000370225 NXF1Q9UBU9 619 aaKnown RBP9.36□□□□□ -0.91
ABCA4-201ENST00000370225 TYW5A2RUC4 315 aaKnown RBP9.35□□□□□ -0.91
ABCA4-201ENST00000370225 SEMA3EO15041 775 aa9.35□□□□□ -0.91
ABCA4-201ENST00000370225 GSPT1P15170 499 aaKnown RBP9.35□□□□□ -0.91
ABCA4-201ENST00000370225 KRBA2Q6ZNG9 492 aa9.35□□□□□ -0.91
ABCA4-201ENST00000370225 CCDC13Q8IYE1 715 aa9.35□□□□□ -0.91
ABCA4-201ENST00000370225 LCORLQ8N3X6 602 aa9.35□□□□□ -0.91
ABCA4-201ENST00000370225 UBN1Q9NPG3 1134 aa9.35□□□□□ -0.91
ABCA4-201ENST00000370225 PZPP20742 1482 aa9.35□□□□□ -0.91
ABCA4-201ENST00000370225 TXNDC9O14530 226 aa9.35□□□□□ -0.91
ABCA4-201ENST00000370225 PER1O15534 1290 aaPredicted RBP9.35□□□□□ -0.91
ABCA4-201ENST00000370225 ECE1P42892 770 aa9.35□□□□□ -0.91
ABCA4-201ENST00000370225 SCRN1Q12765 414 aa9.35□□□□□ -0.91
ABCA4-201ENST00000370225 TMTC4Q5T4D3 741 aa9.35□□□□□ -0.91
ABCA4-201ENST00000370225 SLC7A3Q8WY07 619 aa9.35□□□□□ -0.91
ABCA4-201ENST00000370225 USP28Q96RU2 1077 aa9.35□□□□□ -0.91
ABCA4-201ENST00000370225 CCDC68Q9H2F9 335 aa9.35□□□□□ -0.91
ABCA4-201ENST00000370225 ADALQ6DHV7 355 aa9.35□□□□□ -0.91
ABCA4-201ENST00000370225 CIAPIN1Q6FI81 312 aa9.35□□□□□ -0.91
ABCA4-201ENST00000370225 MYLK4Q86YV6 388 aaPredicted RBP9.35□□□□□ -0.91
ABCA4-201ENST00000370225 SMYD4Q8IYR2 804 aaPredicted RBP9.35□□□□□ -0.91
ABCA4-201ENST00000370225 NLRP4Q96MN2 994 aa9.35□□□□□ -0.91
ABCA4-201ENST00000370225 ANAPC5Q9UJX4 755 aa9.35□□□□□ -0.91
ABCA4-201ENST00000370225 SHANK2Q9UPX8 1470 aa9.35□□□□□ -0.91
ABCA4-201ENST00000370225 WDR46O15213 610 aaKnown RBP9.35□□□□□ -0.91
ABCA4-201ENST00000370225 LRRN2O75325 713 aa9.35□□□□□ -0.91
ABCA4-201ENST00000370225 CC2D2BQ6DHV5 1058 aa9.35□□□□□ -0.91
ABCA4-201ENST00000370225 VSIG1Q86XK7 387 aa9.35□□□□□ -0.91
ABCA4-201ENST00000370225 MCUQ8NE86 351 aa9.35□□□□□ -0.91
ABCA4-201ENST00000370225 ZNF274Q96GC6 653 aaPredicted RBP9.35□□□□□ -0.91
ABCA4-201ENST00000370225 NUCKS1Q9H1E3 243 aaKnown RBP9.35□□□□□ -0.91
ABCA4-201ENST00000370225 ADD3Q9UEY8 706 aaKnown RBP9.35□□□□□ -0.91
ABCA4-201ENST00000370225 DDX41Q9UJV9 622 aaKnown RBP9.35□□□□□ -0.91
ABCA4-201ENST00000370225 SOS2Q07890 1332 aaPredicted RBP9.35□□□□□ -0.91
ABCA4-201ENST00000370225 GOLGA8SH3BPF8 625 aa9.35□□□□□ -0.91
ABCA4-201ENST00000370225 KCNA4P22459 653 aa9.35□□□□□ -0.91
ABCA4-201ENST00000370225 NDUFA8P51970 172 aa9.35□□□□□ -0.91
ABCA4-201ENST00000370225 DYNLT1P63172 113 aa9.35□□□□□ -0.91
ABCA4-201ENST00000370225 SYDE2Q5VT97 1194 aa9.35□□□□□ -0.91
ABCA4-201ENST00000370225 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.35□□□□□ -0.91
ABCA4-201ENST00000370225 C10orf67Q8IYJ2 551 aa9.35□□□□□ -0.91
ABCA4-201ENST00000370225 PPFIBP2Q8ND30 876 aa9.35□□□□□ -0.91
ABCA4-201ENST00000370225 NUF2Q9BZD4 464 aa9.35□□□□□ -0.91
ABCA4-201ENST00000370225 SUDS3Q9H7L9 328 aaPredicted RBP9.35□□□□□ -0.91
ABCA4-201ENST00000370225 TCOF1Q13428 1488 aaKnown RBP9.35□□□□□ -0.91
ABCA4-201ENST00000370225 NPHP4O75161 1426 aaPredicted RBP9.35□□□□□ -0.91
ABCA4-201ENST00000370225 CLGNO14967 610 aa9.35□□□□□ -0.91
ABCA4-201ENST00000370225 BMP3P12645 472 aa9.35□□□□□ -0.91
ABCA4-201ENST00000370225 TUBB4BP68371 445 aa9.35□□□□□ -0.91
ABCA4-201ENST00000370225 SLC12A1Q13621 1099 aa9.35□□□□□ -0.91
ABCA4-201ENST00000370225 UNC5CLQ8IV45 518 aa9.35□□□□□ -0.91
ABCA4-201ENST00000370225 GOLGA5Q8TBA6 731 aa9.35□□□□□ -0.91
ABCA4-201ENST00000370225 SLITRK6Q9H5Y7 841 aa9.35□□□□□ -0.91
ABCA4-201ENST00000370225 SGK1O00141 431 aa9.34□□□□□ -0.91
ABCA4-201ENST00000370225 CD58P19256 250 aa9.34□□□□□ -0.91
ABCA4-201ENST00000370225 FOXD4Q12950 439 aaPredicted RBP9.34□□□□□ -0.91
ABCA4-201ENST00000370225 MUM1L1Q5H9M0 696 aa9.34□□□□□ -0.91
ABCA4-201ENST00000370225 RINT1Q6NUQ1 792 aa9.34□□□□□ -0.91
ABCA4-201ENST00000370225 LARSQ9P2J5 1176 aaKnown RBP9.34□□□□□ -0.91
ABCA4-201ENST00000370225 MYOM2P54296 1465 aa9.34□□□□□ -0.91
ABCA4-201ENST00000370225 NDUFAB1O14561 156 aa9.34□□□□□ -0.91
ABCA4-201ENST00000370225 IL6STP40189 918 aaPredicted RBP9.34□□□□□ -0.91
ABCA4-201ENST00000370225 RAPH1Q70E73 1250 aa9.34□□□□□ -0.91
ABCA4-201ENST00000370225 CCNYQ8ND76 341 aa9.34□□□□□ -0.91
ABCA4-201ENST00000370225 PPP4R1Q8TF05 950 aa9.34□□□□□ -0.91
ABCA4-201ENST00000370225 EIF2AK2P19525 551 aaKnown RBP9.34□□□□□ -0.91
ABCA4-201ENST00000370225 DDIT3P35638 169 aa9.34□□□□□ -0.91
ABCA4-201ENST00000370225 NSFP46459 744 aaKnown RBP9.34□□□□□ -0.91
ABCA4-201ENST00000370225 GTF2A1P52655 376 aaPredicted RBP9.34□□□□□ -0.91
ABCA4-201ENST00000370225 MESDQ14696 234 aa9.34□□□□□ -0.91
ABCA4-201ENST00000370225 TTLL6Q8N841 843 aa9.34□□□□□ -0.91
ABCA4-201ENST00000370225 SPATA17Q96L03 361 aa9.34□□□□□ -0.91
ABCA4-201ENST00000370225 PTPREP23469 700 aa9.34□□□□□ -0.91
ABCA4-201ENST00000370225 BFSP1Q12934 665 aa9.34□□□□□ -0.91
ABCA4-201ENST00000370225 SNX1Q13596 522 aa9.34□□□□□ -0.91
ABCA4-201ENST00000370225 PRPSAP1Q14558 356 aa9.34□□□□□ -0.91
ABCA4-201ENST00000370225 AOC3Q16853 763 aa9.34□□□□□ -0.91
ABCA4-201ENST00000370225 HDAC11Q96DB2 347 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 170.6 ms