RNA–Protein interactions for RNA: ENST00000370096.7

COL11A1-203, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene COL11A1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-203ENST00000370096 NDUFA8P51970 172 aa12.08□□□□□ -0.48
COL11A1-203ENST00000370096 CCDC85BQ15834 202 aaPredicted RBP12.08□□□□□ -0.48
COL11A1-203ENST00000370096 ZC3H18Q86VM9 953 aaKnown RBP12.08□□□□□ -0.48
COL11A1-203ENST00000370096 USP28Q96RU2 1077 aa12.08□□□□□ -0.48
COL11A1-203ENST00000370096 GTPBP10A4D1E9 387 aaKnown RBP12.08□□□□□ -0.48
COL11A1-203ENST00000370096 PLS3P13797 630 aa12.08□□□□□ -0.48
COL11A1-203ENST00000370096 TRAPPC10P48553 1259 aa12.08□□□□□ -0.48
COL11A1-203ENST00000370096 CCNYQ8ND76 341 aa12.08□□□□□ -0.48
COL11A1-203ENST00000370096 DEPDC1BQ8WUY9 529 aa12.08□□□□□ -0.48
COL11A1-203ENST00000370096 GPKOWQ92917 476 aaPredicted RBP eCLIP12.08□□□□□ -0.48
COL11A1-203ENST00000370096 NRBF2Q96F24 287 aa12.08□□□□□ -0.48
COL11A1-203ENST00000370096 SPC25Q9HBM1 224 aa12.08□□□□□ -0.48
COL11A1-203ENST00000370096 CLIC4Q9Y696 253 aa12.08□□□□□ -0.48
COL11A1-203ENST00000370096 EPN1Q9Y6I3 576 aaPredicted RBP12.08□□□□□ -0.48
COL11A1-203ENST00000370096 KDM3AQ9Y4C1 1321 aa12.08□□□□□ -0.48
COL11A1-203ENST00000370096 ZAP70P43403 619 aa12.08□□□□□ -0.48
COL11A1-203ENST00000370096 FAM186BQ8IYM0 893 aa12.08□□□□□ -0.48
COL11A1-203ENST00000370096 KCNV2Q8TDN2 545 aa12.08□□□□□ -0.48
COL11A1-203ENST00000370096 TCP1P17987 556 aaKnown RBP12.07□□□□□ -0.48
COL11A1-203ENST00000370096 CASP14P31944 242 aa12.07□□□□□ -0.48
COL11A1-203ENST00000370096 PDZD4Q76G19 769 aaPredicted RBP12.07□□□□□ -0.48
COL11A1-203ENST00000370096 CHAMP1Q96JM3 812 aa12.07□□□□□ -0.48
COL11A1-203ENST00000370096 CSRNP1Q96S65 589 aa12.07□□□□□ -0.48
COL11A1-203ENST00000370096 MLXIPQ9HAP2 919 aa12.07□□□□□ -0.48
COL11A1-203ENST00000370096 ANGPTL2Q9UKU9 493 aa12.07□□□□□ -0.48
COL11A1-203ENST00000370096 DNAJC6O75061 913 aa12.07□□□□□ -0.48
COL11A1-203ENST00000370096 GYS2P54840 703 aa12.07□□□□□ -0.48
COL11A1-203ENST00000370096 ADAM9Q13443 819 aa12.07□□□□□ -0.48
COL11A1-203ENST00000370096 ARMCX5Q6P1M9 558 aa12.07□□□□□ -0.48
COL11A1-203ENST00000370096 SMYD3Q9H7B4 428 aa12.07□□□□□ -0.48
COL11A1-203ENST00000370096 SUGCTQ9HAC7 445 aa12.07□□□□□ -0.48
COL11A1-203ENST00000370096 ARMCX3Q9UH62 379 aaPredicted RBP12.07□□□□□ -0.48
COL11A1-203ENST00000370096 MCF2P10911 925 aa12.07□□□□□ -0.48
COL11A1-203ENST00000370096 MYL7Q01449 175 aa12.07□□□□□ -0.48
COL11A1-203ENST00000370096 RBL2Q08999 1139 aa12.07□□□□□ -0.48
COL11A1-203ENST00000370096 FLOT2Q14254 428 aa12.07□□□□□ -0.48
COL11A1-203ENST00000370096 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.07□□□□□ -0.48
COL11A1-203ENST00000370096 HLA-DPA1P20036 260 aa12.07□□□□□ -0.48
COL11A1-203ENST00000370096 DNAAF3Q8N9W5 541 aa12.07□□□□□ -0.48
COL11A1-203ENST00000370096 TTLL11Q8NHH1 800 aa12.07□□□□□ -0.48
COL11A1-203ENST00000370096 TRAIPQ9BWF2 469 aa12.07□□□□□ -0.48
COL11A1-203ENST00000370096 YIPF3Q9GZM5 350 aa12.07□□□□□ -0.48
COL11A1-203ENST00000370096 ZBTB7BO15156 539 aaPredicted RBP12.07□□□□□ -0.48
COL11A1-203ENST00000370096 TADA3O75528 432 aa12.07□□□□□ -0.48
COL11A1-203ENST00000370096 NT5C3AQ9H0P0 336 aa12.07□□□□□ -0.48
COL11A1-203ENST00000370096 TRPC5Q9UL62 973 aaPredicted RBP12.07□□□□□ -0.48
COL11A1-203ENST00000370096 MAP3K5Q99683 1374 aa12.06□□□□□ -0.48
COL11A1-203ENST00000370096 GOLGA8QA0A0J9YX86 632 aa12.06□□□□□ -0.48
COL11A1-203ENST00000370096 GOLGA8OA6NCC3 632 aa12.06□□□□□ -0.48
COL11A1-203ENST00000370096 GOLGA8NF8WBI6 632 aa12.06□□□□□ -0.48
COL11A1-203ENST00000370096 GOLGA8HP0CJ92 632 aa12.06□□□□□ -0.48
COL11A1-203ENST00000370096 MRPS25P82663 173 aaKnown RBP12.06□□□□□ -0.48
COL11A1-203ENST00000370096 KIF19Q2TAC6 998 aa12.06□□□□□ -0.48
COL11A1-203ENST00000370096 EFHD1Q9BUP0 239 aa12.06□□□□□ -0.48
COL11A1-203ENST00000370096 DDX25Q9UHL0 483 aaKnown RBP12.06□□□□□ -0.48
COL11A1-203ENST00000370096 TEKT2Q9UIF3 430 aa12.06□□□□□ -0.48
COL11A1-203ENST00000370096 H0Y3Z8 333 aa12.06□□□□□ -0.48
COL11A1-203ENST00000370096 HEXIM1O94992 359 aaKnown RBP12.06□□□□□ -0.48
COL11A1-203ENST00000370096 YWHAHQ04917 246 aaPredicted RBP12.06□□□□□ -0.48
COL11A1-203ENST00000370096 SGO2Q562F6 1265 aa12.06□□□□□ -0.48
COL11A1-203ENST00000370096 ADALQ6DHV7 355 aa12.06□□□□□ -0.48
COL11A1-203ENST00000370096 SPOPLQ6IQ16 392 aa12.06□□□□□ -0.48
COL11A1-203ENST00000370096 NR1H4Q96RI1 486 aaPredicted RBP12.06□□□□□ -0.48
COL11A1-203ENST00000370096 NOVA2Q9UNW9 492 aaKnown RBP12.06□□□□□ -0.48
COL11A1-203ENST00000370096 MAN1A2O60476 641 aa12.06□□□□□ -0.48
COL11A1-203ENST00000370096 KITP10721 976 aa12.06□□□□□ -0.48
COL11A1-203ENST00000370096 BASP1P80723 227 aaKnown RBP12.06□□□□□ -0.48
COL11A1-203ENST00000370096 NNTQ13423 1086 aa12.06□□□□□ -0.48
COL11A1-203ENST00000370096 TBC1D1Q86TI0 1168 aaPredicted RBP12.06□□□□□ -0.48
COL11A1-203ENST00000370096 ST13P4Q8IZP2 240 aaPredicted RBP12.06□□□□□ -0.48
COL11A1-203ENST00000370096 BBOF1Q8ND07 529 aa12.06□□□□□ -0.48
COL11A1-203ENST00000370096 GGA1Q9UJY5 639 aa12.06□□□□□ -0.48
COL11A1-203ENST00000370096 STRIP2Q9ULQ0 834 aa12.06□□□□□ -0.48
COL11A1-203ENST00000370096 PACSIN2Q9UNF0 486 aaPredicted RBP12.06□□□□□ -0.48
COL11A1-203ENST00000370096 A0A087WWV3 80 aa12.06□□□□□ -0.48
COL11A1-203ENST00000370096 FTCDO95954 541 aa12.06□□□□□ -0.48
COL11A1-203ENST00000370096 SZRD1Q7Z422 152 aa12.06□□□□□ -0.48
COL11A1-203ENST00000370096 SMYD4Q8IYR2 804 aaPredicted RBP12.06□□□□□ -0.48
COL11A1-203ENST00000370096 SPATA5Q8NB90 893 aa12.06□□□□□ -0.48
COL11A1-203ENST00000370096 GPT2Q8TD30 523 aa12.06□□□□□ -0.48
COL11A1-203ENST00000370096 PCDHA12Q9UN75 941 aa12.06□□□□□ -0.48
COL11A1-203ENST00000370096 PDE6AP16499 860 aa12.06□□□□□ -0.48
COL11A1-203ENST00000370096 RANBP1P43487 201 aa12.06□□□□□ -0.48
COL11A1-203ENST00000370096 ATG16L1Q676U5 607 aa12.06□□□□□ -0.48
COL11A1-203ENST00000370096 HIBCHQ6NVY1 386 aaPredicted RBP12.06□□□□□ -0.48
COL11A1-203ENST00000370096 HACD3Q9P035 362 aa12.06□□□□□ -0.48
COL11A1-203ENST00000370096 EYA2O00167 538 aa12.06□□□□□ -0.48
COL11A1-203ENST00000370096 ESRRAP11474 423 aaPredicted RBP12.06□□□□□ -0.48
COL11A1-203ENST00000370096 NSFP46459 744 aaKnown RBP12.06□□□□□ -0.48
COL11A1-203ENST00000370096 IDI1Q13907 227 aa12.06□□□□□ -0.48
COL11A1-203ENST00000370096 EDC3Q96F86 508 aaKnown RBP12.06□□□□□ -0.48
COL11A1-203ENST00000370096 CNOT6LQ96LI5 555 aaKnown RBP12.06□□□□□ -0.48
COL11A1-203ENST00000370096 SPZ1Q9BXG8 430 aa12.06□□□□□ -0.48
COL11A1-203ENST00000370096 GLT8D2Q9H1C3 349 aa12.06□□□□□ -0.48
COL11A1-203ENST00000370096 TXLNGQ9NUQ3 528 aa12.06□□□□□ -0.48
COL11A1-203ENST00000370096 HESX1Q9UBX0 185 aa12.06□□□□□ -0.48
COL11A1-203ENST00000370096 SKIP12755 728 aa12.05□□□□□ -0.48
COL11A1-203ENST00000370096 GJA10Q969M2 543 aa12.05□□□□□ -0.48
COL11A1-203ENST00000370096 TESK2Q96S53 571 aa12.05□□□□□ -0.48
COL11A1-203ENST00000370096 PLCH2O75038 1416 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms