RNA–Protein interactions for RNA: ENST00000369220.8

CCNC-203, Transcript of cyclin C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCNC, Length 2,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-203ENST00000369220 ZNF236Q9UL36 1845 aa11.91□□□□□ -0.5
CCNC-203ENST00000369220 MCM3APO60318 1980 aa11.91□□□□□ -0.5
CCNC-203ENST00000369220 XRCC5P13010 732 aaKnown RBP11.91□□□□□ -0.5
CCNC-203ENST00000369220 GRK4P32298 578 aa11.91□□□□□ -0.5
CCNC-203ENST00000369220 PFKFB3Q16875 520 aaPredicted RBP11.91□□□□□ -0.5
CCNC-203ENST00000369220 SLC9C1Q4G0N8 1177 aa11.91□□□□□ -0.5
CCNC-203ENST00000369220 USP17L6PQ6QN14 398 aa11.91□□□□□ -0.5
CCNC-203ENST00000369220 FAM133AQ8N9E0 248 aa11.91□□□□□ -0.5
CCNC-203ENST00000369220 TMX3Q96JJ7 454 aa11.91□□□□□ -0.5
CCNC-203ENST00000369220 RNF26Q9BY78 433 aaPredicted RBP11.91□□□□□ -0.5
CCNC-203ENST00000369220 SOWAHBA6NEL2 793 aa11.9□□□□□ -0.5
CCNC-203ENST00000369220 POTEB2H3BUK9 544 aa11.9□□□□□ -0.5
CCNC-203ENST00000369220 STXBP3O00186 592 aa11.9□□□□□ -0.5
CCNC-203ENST00000369220 SCG2P13521 617 aa11.9□□□□□ -0.5
CCNC-203ENST00000369220 FDPSP14324 419 aaKnown RBP11.9□□□□□ -0.5
CCNC-203ENST00000369220 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.9□□□□□ -0.5
CCNC-203ENST00000369220 NSUN7Q8NE18 718 aaKnown RBP11.9□□□□□ -0.5
CCNC-203ENST00000369220 BARHL2Q9NY43 387 aa11.9□□□□□ -0.5
CCNC-203ENST00000369220 VPS54Q9P1Q0 977 aa11.9□□□□□ -0.5
CCNC-203ENST00000369220 MRPL11Q9Y3B7 192 aaKnown RBP11.9□□□□□ -0.5
CCNC-203ENST00000369220 PFASO15067 1338 aa11.9□□□□□ -0.5
CCNC-203ENST00000369220 PRPF3O43395 683 aaKnown RBP11.9□□□□□ -0.5
CCNC-203ENST00000369220 PRMT2P55345 433 aa11.9□□□□□ -0.5
CCNC-203ENST00000369220 PKN2Q16513 984 aaKnown RBP11.9□□□□□ -0.5
CCNC-203ENST00000369220 SYTL5Q8TDW5 730 aaPredicted RBP11.9□□□□□ -0.5
CCNC-203ENST00000369220 PLXNA1Q9UIW2 1896 aa11.9□□□□□ -0.5
CCNC-203ENST00000369220 MEIS2O14770 477 aa11.89□□□□□ -0.51
CCNC-203ENST00000369220 IGHA2P01877 340 aa11.89□□□□□ -0.51
CCNC-203ENST00000369220 INHAP05111 366 aa11.89□□□□□ -0.51
CCNC-203ENST00000369220 NAPAP54920 295 aa11.89□□□□□ -0.51
CCNC-203ENST00000369220 MTFR1Q15390 333 aa11.89□□□□□ -0.51
CCNC-203ENST00000369220 UBE2SQ16763 222 aa11.89□□□□□ -0.51
CCNC-203ENST00000369220 PRAMEF19Q5SWL8 479 aa11.89□□□□□ -0.51
CCNC-203ENST00000369220 PXYLP1Q8TE99 480 aa11.89□□□□□ -0.51
CCNC-203ENST00000369220 BIN2Q9UBW5 565 aaPredicted RBP11.89□□□□□ -0.51
CCNC-203ENST00000369220 HSD17B4P51659 736 aa11.89□□□□□ -0.51
CCNC-203ENST00000369220 AKAP17AQ02040 695 aaKnown RBP11.89□□□□□ -0.51
CCNC-203ENST00000369220 SSRP1Q08945 709 aaKnown RBP11.89□□□□□ -0.51
CCNC-203ENST00000369220 FCHSD1Q86WN1 690 aa11.89□□□□□ -0.51
CCNC-203ENST00000369220 TRIM22Q8IYM9 498 aa11.89□□□□□ -0.51
CCNC-203ENST00000369220 SLAIN1Q8ND83 568 aa11.89□□□□□ -0.51
CCNC-203ENST00000369220 TAAR1Q96RJ0 339 aa11.89□□□□□ -0.51
CCNC-203ENST00000369220 PSTPIP2Q9H939 334 aa11.89□□□□□ -0.51
CCNC-203ENST00000369220 PNMA2Q9UL42 364 aa11.89□□□□□ -0.51
CCNC-203ENST00000369220 TNRC18O15417 2968 aaPredicted RBP11.88□□□□□ -0.51
CCNC-203ENST00000369220 HMGCRP04035 888 aa11.88□□□□□ -0.51
CCNC-203ENST00000369220 PRKAR2AP13861 404 aaKnown RBP11.88□□□□□ -0.51
CCNC-203ENST00000369220 UBXN2AP68543 259 aa11.88□□□□□ -0.51
CCNC-203ENST00000369220 CPLX2Q6PUV4 134 aaKnown RBP11.88□□□□□ -0.51
CCNC-203ENST00000369220 EEPD1Q7L9B9 569 aa11.88□□□□□ -0.51
CCNC-203ENST00000369220 TNS4Q8IZW8 715 aa11.88□□□□□ -0.51
CCNC-203ENST00000369220 ZNF333Q96JL9 665 aa11.88□□□□□ -0.51
CCNC-203ENST00000369220 ZFP91Q96JP5 570 aaPredicted RBP11.88□□□□□ -0.51
CCNC-203ENST00000369220 PGBD1Q96JS3 809 aa11.88□□□□□ -0.51
CCNC-203ENST00000369220 TINF2Q9BSI4 451 aa11.88□□□□□ -0.51
CCNC-203ENST00000369220 ORC3Q9UBD5 711 aaPredicted RBP11.88□□□□□ -0.51
CCNC-203ENST00000369220 RBBP6Q7Z6E9 1792 aaKnown RBP11.88□□□□□ -0.51
CCNC-203ENST00000369220 DEXIO95424 95 aa11.87□□□□□ -0.51
CCNC-203ENST00000369220 EIF2AK2P19525 551 aaKnown RBP11.87□□□□□ -0.51
CCNC-203ENST00000369220 FOSBP53539 338 aa11.87□□□□□ -0.51
CCNC-203ENST00000369220 GHRHRQ02643 423 aa11.87□□□□□ -0.51
CCNC-203ENST00000369220 CACNB2Q08289 660 aaPredicted RBP11.87□□□□□ -0.51
CCNC-203ENST00000369220 ARMCX2Q7L311 632 aa11.87□□□□□ -0.51
CCNC-203ENST00000369220 MCF2L2Q86YR7 1114 aa11.87□□□□□ -0.51
CCNC-203ENST00000369220 RGS22Q8NE09 1264 aa11.87□□□□□ -0.51
CCNC-203ENST00000369220 TRPV1Q8NER1 839 aa11.87□□□□□ -0.51
CCNC-203ENST00000369220 IL31RAQ8NI17 732 aa11.87□□□□□ -0.51
CCNC-203ENST00000369220 RMDN3Q96TC7 470 aa11.87□□□□□ -0.51
CCNC-203ENST00000369220 SH2B1Q9NRF2 756 aaPredicted RBP11.87□□□□□ -0.51
CCNC-203ENST00000369220 SMCO2A6NFE2 343 aa11.87□□□□□ -0.51
CCNC-203ENST00000369220 GCOM1H8Y6P7 765 aaPredicted RBP11.87□□□□□ -0.51
CCNC-203ENST00000369220 CDKL5O76039 1030 aa11.87□□□□□ -0.51
CCNC-203ENST00000369220 SNAI1O95863 264 aaPredicted RBP11.87□□□□□ -0.51
CCNC-203ENST00000369220 POLR2MP0CAP2 368 aa11.87□□□□□ -0.51
CCNC-203ENST00000369220 PTGS1P23219 599 aa11.87□□□□□ -0.51
CCNC-203ENST00000369220 CCND3P30281 292 aaPredicted RBP11.87□□□□□ -0.51
CCNC-203ENST00000369220 ALDH5A1P51649 535 aaPredicted RBP11.87□□□□□ -0.51
CCNC-203ENST00000369220 MAP3K21Q5TCX8 1036 aa11.87□□□□□ -0.51
CCNC-203ENST00000369220 OLFML2BQ68BL8 750 aa11.87□□□□□ -0.51
CCNC-203ENST00000369220 RASGRP4Q8TDF6 673 aa11.87□□□□□ -0.51
CCNC-203ENST00000369220 ZSCAN31Q96LW9 406 aaPredicted RBP11.87□□□□□ -0.51
CCNC-203ENST00000369220 TMEM260Q9NX78 707 aa11.87□□□□□ -0.51
CCNC-203ENST00000369220 KCNJ14Q9UNX9 436 aa11.87□□□□□ -0.51
CCNC-203ENST00000369220 DIS3Q9Y2L1 958 aaKnown RBP11.87□□□□□ -0.51
CCNC-203ENST00000369220 NPY5RQ15761 445 aa11.86□□□□□ -0.51
CCNC-203ENST00000369220 ANO1Q5XXA6 986 aa11.86□□□□□ -0.51
CCNC-203ENST00000369220 LENG1Q96BZ8 264 aaPredicted RBP11.86□□□□□ -0.51
CCNC-203ENST00000369220 ARMC5Q96C12 935 aa11.86□□□□□ -0.51
CCNC-203ENST00000369220 UNC93B1Q9H1C4 597 aa11.86□□□□□ -0.51
CCNC-203ENST00000369220 SLC5A4Q9NY91 659 aa11.86□□□□□ -0.51
CCNC-203ENST00000369220 RBM27Q9P2N5 1060 aaKnown RBP11.86□□□□□ -0.51
CCNC-203ENST00000369220 STK36Q9NRP7 1315 aa11.86□□□□□ -0.51
CCNC-203ENST00000369220 TRAF1Q13077 416 aa11.86□□□□□ -0.51
CCNC-203ENST00000369220 TMEM63BQ5T3F8 832 aa11.86□□□□□ -0.51
CCNC-203ENST00000369220 MAMDC4Q6UXC1 1216 aa11.86□□□□□ -0.51
CCNC-203ENST00000369220 FBXO16Q8IX29 292 aaPredicted RBP11.86□□□□□ -0.51
CCNC-203ENST00000369220 SMARCC2Q8TAQ2 1214 aa11.86□□□□□ -0.51
CCNC-203ENST00000369220 CUL5Q93034 780 aa11.86□□□□□ -0.51
CCNC-203ENST00000369220 ABHD8Q96I13 439 aa11.86□□□□□ -0.51
CCNC-203ENST00000369220 KATNBL1Q9H079 304 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms