RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 CYP7A1P22680 504 aa10.25□□□□□ -0.77
TPM3-213ENST00000368545 TRPM4Q8TD43 1214 aa10.25□□□□□ -0.77
TPM3-213ENST00000368545 KCTD12Q96CX2 325 aaKnown RBP10.25□□□□□ -0.77
TPM3-213ENST00000368545 SYNGAP1Q96PV0 1343 aa10.24□□□□□ -0.77
TPM3-213ENST00000368545 E7EWF7 191 aa10.24□□□□□ -0.77
TPM3-213ENST00000368545 ZBTB48P10074 688 aaPredicted RBP10.24□□□□□ -0.77
TPM3-213ENST00000368545 CHAF1AQ13111 956 aaPredicted RBP10.24□□□□□ -0.77
TPM3-213ENST00000368545 TAF1CQ15572 869 aaPredicted RBP10.24□□□□□ -0.77
TPM3-213ENST00000368545 NSUN4Q96CB9 384 aaKnown RBP10.24□□□□□ -0.77
TPM3-213ENST00000368545 NACAP1Q9BZK3 213 aa10.24□□□□□ -0.77
TPM3-213ENST00000368545 APPP05067 770 aa10.24□□□□□ -0.77
TPM3-213ENST00000368545 CPA1P15085 419 aa10.24□□□□□ -0.77
TPM3-213ENST00000368545 LRIT3Q3SXY7 679 aa10.24□□□□□ -0.77
TPM3-213ENST00000368545 NOL8Q76FK4 1167 aaKnown RBP10.24□□□□□ -0.77
TPM3-213ENST00000368545 MPNDQ8N594 471 aa10.24□□□□□ -0.77
TPM3-213ENST00000368545 DPF3Q92784 378 aa10.24□□□□□ -0.77
TPM3-213ENST00000368545 GPRASP2Q96D09 838 aa10.24□□□□□ -0.77
TPM3-213ENST00000368545 EYA3Q99504 573 aa10.24□□□□□ -0.77
TPM3-213ENST00000368545 ANP32EQ9BTT0 268 aa10.24□□□□□ -0.77
TPM3-213ENST00000368545 NAPBQ9H115 298 aa10.24□□□□□ -0.77
TPM3-213ENST00000368545 CD209Q9NNX6 404 aa10.24□□□□□ -0.77
TPM3-213ENST00000368545 POLLQ9UGP5 575 aa10.24□□□□□ -0.77
TPM3-213ENST00000368545 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.24□□□□□ -0.77
TPM3-213ENST00000368545 TAF6LQ9Y6J9 622 aa10.24□□□□□ -0.77
TPM3-213ENST00000368545 MYH2Q9UKX2 1941 aa10.23□□□□□ -0.77
TPM3-213ENST00000368545 NUCB2P80303 420 aa10.23□□□□□ -0.77
TPM3-213ENST00000368545 KIF4BQ2VIQ3 1234 aa10.23□□□□□ -0.77
TPM3-213ENST00000368545 DPP8Q6V1X1 898 aaPredicted RBP10.23□□□□□ -0.77
TPM3-213ENST00000368545 STOX1Q6ZVD7 989 aa10.23□□□□□ -0.77
TPM3-213ENST00000368545 DHX32Q7L7V1 743 aaKnown RBP10.23□□□□□ -0.77
TPM3-213ENST00000368545 DZIP1Q86YF9 867 aaKnown RBP10.23□□□□□ -0.77
TPM3-213ENST00000368545 CERS3Q8IU89 383 aa10.23□□□□□ -0.77
TPM3-213ENST00000368545 TBC1D22AQ8WUA7 517 aa10.23□□□□□ -0.77
TPM3-213ENST00000368545 CCDC74AQ96AQ1 378 aa10.23□□□□□ -0.77
TPM3-213ENST00000368545 COA1Q9GZY4 146 aa10.23□□□□□ -0.77
TPM3-213ENST00000368545 ARMT1Q9H993 441 aa10.23□□□□□ -0.77
TPM3-213ENST00000368545 WDR19Q8NEZ3 1342 aa10.23□□□□□ -0.77
TPM3-213ENST00000368545 MARCH6O60337 910 aa10.22□□□□□ -0.77
TPM3-213ENST00000368545 GSTO1P78417 241 aa10.22□□□□□ -0.77
TPM3-213ENST00000368545 MECOMQ03112 1051 aa10.22□□□□□ -0.77
TPM3-213ENST00000368545 RAB3GAP1Q15042 981 aa10.22□□□□□ -0.77
TPM3-213ENST00000368545 AOC3Q16853 763 aa10.22□□□□□ -0.77
TPM3-213ENST00000368545 RALYLQ86SE5 291 aaKnown RBP10.22□□□□□ -0.77
TPM3-213ENST00000368545 SLC51AQ86UW1 340 aa10.22□□□□□ -0.77
TPM3-213ENST00000368545 IFNL3Q8IZI9 196 aa10.22□□□□□ -0.77
TPM3-213ENST00000368545 LCORLQ8N3X6 602 aa10.22□□□□□ -0.77
TPM3-213ENST00000368545 FOXD3Q9UJU5 478 aaPredicted RBP10.22□□□□□ -0.77
TPM3-213ENST00000368545 SLC4A4Q9Y6R1 1079 aa10.22□□□□□ -0.77
TPM3-213ENST00000368545 FAM205AQ6ZU69 1335 aa10.22□□□□□ -0.77
TPM3-213ENST00000368545 GSG1L2A8MUP6 293 aa10.22□□□□□ -0.77
TPM3-213ENST00000368545 NR3C2P08235 984 aa10.22□□□□□ -0.77
TPM3-213ENST00000368545 PRDX5P30044 214 aa10.22□□□□□ -0.77
TPM3-213ENST00000368545 TRDNQ13061 729 aa10.22□□□□□ -0.77
TPM3-213ENST00000368545 TOB2Q14106 344 aaPredicted RBP10.22□□□□□ -0.77
TPM3-213ENST00000368545 SLC9C1Q4G0N8 1177 aa10.22□□□□□ -0.77
TPM3-213ENST00000368545 TTLL5Q6EMB2 1281 aa10.22□□□□□ -0.77
TPM3-213ENST00000368545 ERMP1Q7Z2K6 904 aa10.22□□□□□ -0.77
TPM3-213ENST00000368545 FBXL16Q8N461 479 aa10.22□□□□□ -0.77
TPM3-213ENST00000368545 MIGA1Q8NAN2 632 aa10.22□□□□□ -0.77
TPM3-213ENST00000368545 TTC16Q8NEE8 873 aa10.22□□□□□ -0.77
TPM3-213ENST00000368545 NCOA7Q8NI08 942 aa10.22□□□□□ -0.77
TPM3-213ENST00000368545 RIOK1Q9BRS2 568 aaKnown RBP10.22□□□□□ -0.77
TPM3-213ENST00000368545 NEUROD4Q9HD90 331 aa10.22□□□□□ -0.77
TPM3-213ENST00000368545 RPTORQ8N122 1335 aa10.21□□□□□ -0.77
TPM3-213ENST00000368545 TDO2P48775 406 aa10.21□□□□□ -0.77
TPM3-213ENST00000368545 EXOSC10Q01780 885 aaKnown RBP10.21□□□□□ -0.77
TPM3-213ENST00000368545 NFKBIBQ15653 356 aa10.21□□□□□ -0.77
TPM3-213ENST00000368545 ADGRA1Q86SQ6 560 aa10.21□□□□□ -0.77
TPM3-213ENST00000368545 KDF1Q8NAX2 398 aaPredicted RBP10.21□□□□□ -0.77
TPM3-213ENST00000368545 AGBL3Q8NEM8 1001 aa10.21□□□□□ -0.77
TPM3-213ENST00000368545 AGXT2Q9BYV1 514 aa10.21□□□□□ -0.77
TPM3-213ENST00000368545 ZC3H12CQ9C0D7 883 aaKnown RBP10.21□□□□□ -0.77
TPM3-213ENST00000368545 EPB41L4AQ9HCS5 686 aaPredicted RBP10.21□□□□□ -0.77
TPM3-213ENST00000368545 BAZ2AQ9UIF9 1905 aaKnown RBP10.21□□□□□ -0.78
TPM3-213ENST00000368545 POTEMA6NI47 508 aa10.21□□□□□ -0.78
TPM3-213ENST00000368545 MCM5P33992 734 aa10.21□□□□□ -0.78
TPM3-213ENST00000368545 ZNF280AP59817 542 aaPredicted RBP10.21□□□□□ -0.78
TPM3-213ENST00000368545 HAND2P61296 217 aa10.21□□□□□ -0.78
TPM3-213ENST00000368545 PTPROQ16827 1216 aa10.21□□□□□ -0.78
TPM3-213ENST00000368545 Q6ZUG5 572 aa10.21□□□□□ -0.78
TPM3-213ENST00000368545 CHMP4CQ96CF2 233 aa10.21□□□□□ -0.78
TPM3-213ENST00000368545 CNNM2Q9H8M5 875 aa10.21□□□□□ -0.78
TPM3-213ENST00000368545 ZCCHC17Q9NP64 241 aaKnown RBP10.21□□□□□ -0.78
TPM3-213ENST00000368545 SUGT1Q9Y2Z0 365 aa10.21□□□□□ -0.78
TPM3-213ENST00000368545 NAV1Q8NEY1 1877 aa10.2□□□□□ -0.78
TPM3-213ENST00000368545 ADH1CP00326 375 aa10.2□□□□□ -0.78
TPM3-213ENST00000368545 LDHCP07864 332 aa10.2□□□□□ -0.78
TPM3-213ENST00000368545 USP17L7P0C7H9 530 aa10.2□□□□□ -0.78
TPM3-213ENST00000368545 SP3Q02447 781 aa10.2□□□□□ -0.78
TPM3-213ENST00000368545 KIF22Q14807 665 aa10.2□□□□□ -0.78
TPM3-213ENST00000368545 MICAL1Q8TDZ2 1067 aa10.2□□□□□ -0.78
TPM3-213ENST00000368545 ZNF384Q8TF68 577 aa10.2□□□□□ -0.78
TPM3-213ENST00000368545 NOL10Q9BSC4 688 aaKnown RBP10.2□□□□□ -0.78
TPM3-213ENST00000368545 CRNKL1Q9BZJ0 848 aaKnown RBP10.2□□□□□ -0.78
TPM3-213ENST00000368545 FAM8A1Q9UBU6 413 aa10.2□□□□□ -0.78
TPM3-213ENST00000368545 TPCN1Q9ULQ1 816 aa10.2□□□□□ -0.78
TPM3-213ENST00000368545 CDK5RAP2Q96SN8 1893 aa10.2□□□□□ -0.78
TPM3-213ENST00000368545 FOCADQ5VW36 1801 aa10.19□□□□□ -0.78
TPM3-213ENST00000368545 ADM5C9JUS6 153 aa10.19□□□□□ -0.78
TPM3-213ENST00000368545 TNFRSF21O75509 655 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms