RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 RFX7Q2KHR2 1363 aa13.58□□□□□ -0.24
PTPRK-203ENST00000368207 CSF1RP07333 972 aa13.58□□□□□ -0.24
PTPRK-203ENST00000368207 PLCG1P19174 1290 aa13.58□□□□□ -0.24
PTPRK-203ENST00000368207 AOC3Q16853 763 aa13.58□□□□□ -0.24
PTPRK-203ENST00000368207 DALRD3Q5D0E6 543 aaKnown RBP13.58□□□□□ -0.24
PTPRK-203ENST00000368207 MICALCLQ6ZW33 695 aa13.58□□□□□ -0.24
PTPRK-203ENST00000368207 CCDC26Q8TAB7 109 aa13.58□□□□□ -0.24
PTPRK-203ENST00000368207 CEP95Q96GE4 821 aa13.58□□□□□ -0.24
PTPRK-203ENST00000368207 IWS1Q96ST2 819 aa13.58□□□□□ -0.24
PTPRK-203ENST00000368207 KIAA1210Q9ULL0 1709 aa13.58□□□□□ -0.24
PTPRK-203ENST00000368207 JCADQ9P266 1359 aa13.58□□□□□ -0.24
PTPRK-203ENST00000368207 CASP1P29466 404 aa13.58□□□□□ -0.24
PTPRK-203ENST00000368207 ETF1P62495 437 aaKnown RBP13.58□□□□□ -0.24
PTPRK-203ENST00000368207 LINC00116Q8NCU8 138 aa13.58□□□□□ -0.24
PTPRK-203ENST00000368207 UBLCP1Q8WVY7 318 aaPredicted RBP13.58□□□□□ -0.24
PTPRK-203ENST00000368207 ZBTB7AO95365 584 aa13.58□□□□□ -0.24
PTPRK-203ENST00000368207 DLATP10515 647 aaKnown RBP13.58□□□□□ -0.24
PTPRK-203ENST00000368207 ATP1A3P13637 1013 aa13.58□□□□□ -0.24
PTPRK-203ENST00000368207 GCFC2P16383 781 aaKnown RBP13.58□□□□□ -0.24
PTPRK-203ENST00000368207 MAP3K9P80192 1104 aa13.58□□□□□ -0.24
PTPRK-203ENST00000368207 PEX26Q7Z412 305 aa13.58□□□□□ -0.24
PTPRK-203ENST00000368207 PODNQ7Z5L7 613 aa13.58□□□□□ -0.24
PTPRK-203ENST00000368207 NUCKS1Q9H1E3 243 aaKnown RBP13.58□□□□□ -0.24
PTPRK-203ENST00000368207 CUEDC2Q9H467 287 aa13.58□□□□□ -0.24
PTPRK-203ENST00000368207 TAF6LQ9Y6J9 622 aa13.58□□□□□ -0.24
PTPRK-203ENST00000368207 RFX5P48382 616 aaPredicted RBP13.57□□□□□ -0.24
PTPRK-203ENST00000368207 RPS6KA1Q15418 735 aa13.57□□□□□ -0.24
PTPRK-203ENST00000368207 ARMCX5Q6P1M9 558 aa13.57□□□□□ -0.24
PTPRK-203ENST00000368207 HDXQ7Z353 690 aa13.57□□□□□ -0.24
PTPRK-203ENST00000368207 CDAN1Q8IWY9 1227 aa13.57□□□□□ -0.24
PTPRK-203ENST00000368207 SELENOSQ9BQE4 189 aa13.57□□□□□ -0.24
PTPRK-203ENST00000368207 MROH7-TTC4A0A0A0MT08 1334 aa13.57□□□□□ -0.24
PTPRK-203ENST00000368207 ABCC12Q96J65 1359 aa13.57□□□□□ -0.24
PTPRK-203ENST00000368207 IKBKBO14920 756 aa13.57□□□□□ -0.24
PTPRK-203ENST00000368207 ZNF500O60304 480 aaPredicted RBP13.57□□□□□ -0.24
PTPRK-203ENST00000368207 LIG4P49917 911 aa13.57□□□□□ -0.24
PTPRK-203ENST00000368207 LIN9Q5TKA1 542 aa13.57□□□□□ -0.24
PTPRK-203ENST00000368207 RTKN2Q8IZC4 609 aa13.57□□□□□ -0.24
PTPRK-203ENST00000368207 PPP1R14CQ8TAE6 165 aa13.57□□□□□ -0.24
PTPRK-203ENST00000368207 COMMD10Q9Y6G5 202 aa13.57□□□□□ -0.24
PTPRK-203ENST00000368207 USP42Q9H9J4 1324 aaKnown RBP13.57□□□□□ -0.24
PTPRK-203ENST00000368207 PNMA6FA0A0J9YX94 578 aa13.57□□□□□ -0.24
PTPRK-203ENST00000368207 LRRIQ4A6NIV6 560 aa13.57□□□□□ -0.24
PTPRK-203ENST00000368207 ECE2O60344 883 aa13.57□□□□□ -0.24
PTPRK-203ENST00000368207 SEPT2Q15019 361 aa13.57□□□□□ -0.24
PTPRK-203ENST00000368207 VPS72Q15906 364 aa13.57□□□□□ -0.24
PTPRK-203ENST00000368207 DCUN1D2Q6PH85 259 aa13.57□□□□□ -0.24
PTPRK-203ENST00000368207 GBP6Q6ZN66 633 aa13.57□□□□□ -0.24
PTPRK-203ENST00000368207 APBB1IPQ7Z5R6 666 aaPredicted RBP13.57□□□□□ -0.24
PTPRK-203ENST00000368207 IQCGQ9H095 443 aaKnown RBP13.57□□□□□ -0.24
PTPRK-203ENST00000368207 MAGEF1Q9HAY2 307 aa13.57□□□□□ -0.24
PTPRK-203ENST00000368207 NR2F2P24468 414 aa13.56□□□□□ -0.24
PTPRK-203ENST00000368207 P2RX5Q93086 422 aa13.56□□□□□ -0.24
PTPRK-203ENST00000368207 PAGE5Q96GU1 130 aa13.56□□□□□ -0.24
PTPRK-203ENST00000368207 GDAP1L1Q96MZ0 367 aa13.56□□□□□ -0.24
PTPRK-203ENST00000368207 PSMD1Q99460 953 aa13.56□□□□□ -0.24
PTPRK-203ENST00000368207 AGTPBP1Q9UPW5 1226 aa13.56□□□□□ -0.24
PTPRK-203ENST00000368207 TMEM179Q6ZVK1 233 aa13.56□□□□□ -0.24
PTPRK-203ENST00000368207 RSPH14Q9UHP6 348 aa13.56□□□□□ -0.24
PTPRK-203ENST00000368207 BUB1O43683 1085 aa13.56□□□□□ -0.24
PTPRK-203ENST00000368207 PTPREP23469 700 aa13.56□□□□□ -0.24
PTPRK-203ENST00000368207 PPARDQ03181 441 aa13.56□□□□□ -0.24
PTPRK-203ENST00000368207 SLC27A3Q5K4L6 730 aa13.56□□□□□ -0.24
PTPRK-203ENST00000368207 DDX12PQ92771 950 aa13.56□□□□□ -0.24
PTPRK-203ENST00000368207 NAP1L3Q99457 506 aaPredicted RBP13.56□□□□□ -0.24
PTPRK-203ENST00000368207 ZNF215Q9UL58 517 aaPredicted RBP13.56□□□□□ -0.24
PTPRK-203ENST00000368207 EPN1Q9Y6I3 576 aaPredicted RBP13.56□□□□□ -0.24
PTPRK-203ENST00000368207 UBN2Q6ZU65 1347 aa13.56□□□□□ -0.24
PTPRK-203ENST00000368207 FRMPD1Q5SYB0 1578 aa13.56□□□□□ -0.24
PTPRK-203ENST00000368207 PPM1KQ8N3J5 372 aa13.56□□□□□ -0.24
PTPRK-203ENST00000368207 UBL4BQ8N7F7 174 aa13.56□□□□□ -0.24
PTPRK-203ENST00000368207 SAR1BQ9Y6B6 198 aa13.56□□□□□ -0.24
PTPRK-203ENST00000368207 hCG_1984214I3L0E3 225 aa13.55□□□□□ -0.24
PTPRK-203ENST00000368207 MAPK8IP2Q13387 824 aaPredicted RBP13.55□□□□□ -0.24
PTPRK-203ENST00000368207 TUBB2AQ13885 445 aa13.55□□□□□ -0.24
PTPRK-203ENST00000368207 SF3B3Q15393 1217 aaKnown RBP13.55□□□□□ -0.24
PTPRK-203ENST00000368207 PFKFB3Q16875 520 aaPredicted RBP13.55□□□□□ -0.24
PTPRK-203ENST00000368207 ERCC6LQ2NKX8 1250 aa13.55□□□□□ -0.24
PTPRK-203ENST00000368207 TSGA10IPQ3SY00 556 aa13.55□□□□□ -0.24
PTPRK-203ENST00000368207 DAAM2Q86T65 1068 aa13.55□□□□□ -0.24
PTPRK-203ENST00000368207 ZNF713Q8N859 430 aaPredicted RBP13.55□□□□□ -0.24
PTPRK-203ENST00000368207 NSUN4Q96CB9 384 aaKnown RBP13.55□□□□□ -0.24
PTPRK-203ENST00000368207 TUBB2BQ9BVA1 445 aa13.55□□□□□ -0.24
PTPRK-203ENST00000368207 CCDC94Q9BW85 323 aaPredicted RBP13.55□□□□□ -0.24
PTPRK-203ENST00000368207 ZNF341Q9BYN7 854 aa13.55□□□□□ -0.24
PTPRK-203ENST00000368207 UTYO14607 1347 aa13.55□□□□□ -0.24
PTPRK-203ENST00000368207 ZNF658Q5TYW1 1059 aaPredicted RBP13.55□□□□□ -0.24
PTPRK-203ENST00000368207 ANO3Q9BYT9 981 aa13.55□□□□□ -0.24
PTPRK-203ENST00000368207 USP17L15C9J2P7 530 aa13.55□□□□□ -0.24
PTPRK-203ENST00000368207 USP17L13C9JLJ4 530 aa13.55□□□□□ -0.24
PTPRK-203ENST00000368207 USP17L11C9JVI0 530 aa13.55□□□□□ -0.24
PTPRK-203ENST00000368207 USP17L18D6R9N7 530 aa13.55□□□□□ -0.24
PTPRK-203ENST00000368207 USP17L22D6RA61 530 aa13.55□□□□□ -0.24
PTPRK-203ENST00000368207 USP17L17D6RBQ6 530 aa13.55□□□□□ -0.24
PTPRK-203ENST00000368207 USP17L19D6RCP7 530 aa13.55□□□□□ -0.24
PTPRK-203ENST00000368207 USP17L20D6RJB6 530 aa13.55□□□□□ -0.24
PTPRK-203ENST00000368207 POLGP54098 1239 aaPredicted RBP13.55□□□□□ -0.24
PTPRK-203ENST00000368207 USP17L24Q0WX57 530 aa13.55□□□□□ -0.24
PTPRK-203ENST00000368207 PRR5LQ6MZQ0 368 aa13.55□□□□□ -0.24
PTPRK-203ENST00000368207 USP17L6PQ6QN14 398 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms