RNA–Protein interactions for RNA: ENST00000366790.3

PARP1-201, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

TSL 2 BASIC

Gene PARP1, Length 570 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-201ENST00000366790 KDM4AO75164 1064 aa12.19□□□□□ -0.46
PARP1-201ENST00000366790 RPS6P62753 249 aaKnown RBP12.19□□□□□ -0.46
PARP1-201ENST00000366790 BEX3Q00994 111 aa12.19□□□□□ -0.46
PARP1-201ENST00000366790 ASPRV1Q53RT3 343 aa12.19□□□□□ -0.46
PARP1-201ENST00000366790 RNF207Q6ZRF8 634 aa12.19□□□□□ -0.46
PARP1-201ENST00000366790 KIAA1211Q6ZU35 1233 aa12.19□□□□□ -0.46
PARP1-201ENST00000366790 NOL8Q76FK4 1167 aaKnown RBP12.19□□□□□ -0.46
PARP1-201ENST00000366790 SLC17A8Q8NDX2 589 aa12.19□□□□□ -0.46
PARP1-201ENST00000366790 VTI1AQ96AJ9 217 aa12.19□□□□□ -0.46
PARP1-201ENST00000366790 RNPC3Q96LT9 517 aaKnown RBP12.19□□□□□ -0.46
PARP1-201ENST00000366790 GUCD1Q96NT3 240 aa12.19□□□□□ -0.46
PARP1-201ENST00000366790 PURBQ96QR8 312 aaKnown RBP12.19□□□□□ -0.46
PARP1-201ENST00000366790 ZSCAN10Q96SZ4 725 aaPredicted RBP12.19□□□□□ -0.46
PARP1-201ENST00000366790 MPHOSPH6Q99547 160 aaKnown RBP12.19□□□□□ -0.46
PARP1-201ENST00000366790 KRT23Q9C075 422 aa12.19□□□□□ -0.46
PARP1-201ENST00000366790 CNNM2Q9H8M5 875 aa12.19□□□□□ -0.46
PARP1-201ENST00000366790 DDX49Q9Y6V7 483 aaKnown RBP12.19□□□□□ -0.46
PARP1-201ENST00000366790 SCN10AQ9Y5Y9 1956 aa12.19□□□□□ -0.46
PARP1-201ENST00000366790 PTPDC1A2A3K4 754 aa12.18□□□□□ -0.46
PARP1-201ENST00000366790 B4E1Z4 1266 aa12.18□□□□□ -0.46
PARP1-201ENST00000366790 NKRFO15226 690 aaKnown RBP eCLIP12.18□□□□□ -0.46
PARP1-201ENST00000366790 PDE4AP27815 886 aa12.18□□□□□ -0.46
PARP1-201ENST00000366790 PPIGQ13427 754 aaKnown RBP eCLIP12.18□□□□□ -0.46
PARP1-201ENST00000366790 TTC22Q5TAA0 569 aa12.18□□□□□ -0.46
PARP1-201ENST00000366790 CXCL17Q6UXB2 119 aa12.18□□□□□ -0.46
PARP1-201ENST00000366790 SLC30A10Q6XR72 485 aa12.18□□□□□ -0.46
PARP1-201ENST00000366790 EEPD1Q7L9B9 569 aa12.18□□□□□ -0.46
PARP1-201ENST00000366790 ENAHQ8N8S7 591 aaPredicted RBP12.18□□□□□ -0.46
PARP1-201ENST00000366790 ZKSCAN3Q9BRR0 538 aa12.18□□□□□ -0.46
PARP1-201ENST00000366790 KAT14Q9H8E8 782 aa12.18□□□□□ -0.46
PARP1-201ENST00000366790 ZSWIM5Q9P217 1185 aa12.18□□□□□ -0.46
PARP1-201ENST00000366790 GRIN2DO15399 1336 aa12.17□□□□□ -0.46
PARP1-201ENST00000366790 ABCB11O95342 1321 aa12.17□□□□□ -0.46
PARP1-201ENST00000366790 B4DLN1 442 aa12.17□□□□□ -0.46
PARP1-201ENST00000366790 GOLGA8HP0CJ92 632 aa12.17□□□□□ -0.46
PARP1-201ENST00000366790 GSPT1P15170 499 aaKnown RBP12.17□□□□□ -0.46
PARP1-201ENST00000366790 CALML3P27482 149 aa12.17□□□□□ -0.46
PARP1-201ENST00000366790 MRPL12P52815 198 aaKnown RBP12.17□□□□□ -0.46
PARP1-201ENST00000366790 ITGA7Q13683 1181 aa12.17□□□□□ -0.46
PARP1-201ENST00000366790 CDC37Q16543 378 aaPredicted RBP12.17□□□□□ -0.46
PARP1-201ENST00000366790 TMEM63BQ5T3F8 832 aa12.17□□□□□ -0.46
PARP1-201ENST00000366790 RASIP1Q5U651 963 aa12.17□□□□□ -0.46
PARP1-201ENST00000366790 TMEM199Q8N511 208 aa12.17□□□□□ -0.46
PARP1-201ENST00000366790 WDR11Q9BZH6 1224 aa12.17□□□□□ -0.46
PARP1-201ENST00000366790 IL25Q9H293 177 aa12.17□□□□□ -0.46
PARP1-201ENST00000366790 SEMA6BQ9H3T3 888 aa12.17□□□□□ -0.46
PARP1-201ENST00000366790 POLR3EQ9NVU0 708 aa12.17□□□□□ -0.46
PARP1-201ENST00000366790 SUPT16HQ9Y5B9 1047 aaKnown RBP12.17□□□□□ -0.46
PARP1-201ENST00000366790 KIAA1217Q5T5P2 1943 aa12.17□□□□□ -0.46
PARP1-201ENST00000366790 TNKSO95271 1327 aa12.16□□□□□ -0.46
PARP1-201ENST00000366790 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.16□□□□□ -0.46
PARP1-201ENST00000366790 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.16□□□□□ -0.46
PARP1-201ENST00000366790 PARP1P09874 1014 aaKnown RBP12.16□□□□□ -0.46
PARP1-201ENST00000366790 CPT1AP50416 773 aa12.16□□□□□ -0.46
PARP1-201ENST00000366790 TMEM240Q5SV17 173 aa12.16□□□□□ -0.46
PARP1-201ENST00000366790 PSRC1Q6PGN9 363 aaPredicted RBP12.16□□□□□ -0.46
PARP1-201ENST00000366790 C16orf59Q7L2K0 433 aa12.16□□□□□ -0.46
PARP1-201ENST00000366790 ADGRF4Q8IZF3 695 aa12.16□□□□□ -0.46
PARP1-201ENST00000366790 SCFD2Q8WU76 684 aa12.16□□□□□ -0.46
PARP1-201ENST00000366790 RUFY2Q8WXA3 655 aa12.16□□□□□ -0.46
PARP1-201ENST00000366790 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.16□□□□□ -0.467e-7■■□□□ 13.4
PARP1-201ENST00000366790 UBA5Q9GZZ9 404 aa12.16□□□□□ -0.46
PARP1-201ENST00000366790 TTYH1Q9H313 450 aaPredicted RBP12.16□□□□□ -0.46
PARP1-201ENST00000366790 UNC80Q8N2C7 3258 aa12.16□□□□□ -0.46
PARP1-201ENST00000366790 CDH23Q9H251 3354 aa12.16□□□□□ -0.46
PARP1-201ENST00000366790 KPNA6O60684 536 aa12.15□□□□□ -0.46
PARP1-201ENST00000366790 PTGS1P23219 599 aa12.15□□□□□ -0.46
PARP1-201ENST00000366790 PURAQ00577 322 aaKnown RBP12.15□□□□□ -0.46
PARP1-201ENST00000366790 GHRHRQ02643 423 aa12.15□□□□□ -0.46
PARP1-201ENST00000366790 PDE4DQ08499 809 aa12.15□□□□□ -0.46
PARP1-201ENST00000366790 PPP2R5BQ15173 497 aa12.15□□□□□ -0.46
PARP1-201ENST00000366790 SEC23AQ15436 765 aa12.15□□□□□ -0.46
PARP1-201ENST00000366790 MCF2L2Q86YR7 1114 aa12.15□□□□□ -0.46
PARP1-201ENST00000366790 MTMR8Q96EF0 704 aa12.15□□□□□ -0.46
PARP1-201ENST00000366790 CDX2Q99626 313 aaPredicted RBP12.15□□□□□ -0.46
PARP1-201ENST00000366790 UBAC1Q9BSL1 405 aa12.15□□□□□ -0.46
PARP1-201ENST00000366790 CPVLQ9H3G5 476 aa12.15□□□□□ -0.46
PARP1-201ENST00000366790 IL23AQ9NPF7 189 aa12.15□□□□□ -0.46
PARP1-201ENST00000366790 BAZ2BQ9UIF8 2168 aaKnown RBP12.15□□□□□ -0.47
PARP1-201ENST00000366790 A6NJR5 290 aa12.14□□□□□ -0.47
PARP1-201ENST00000366790 CSF2RAP15509 400 aa12.14□□□□□ -0.47
PARP1-201ENST00000366790 CHMLP26374 656 aa12.14□□□□□ -0.47
PARP1-201ENST00000366790 QRICH1Q2TAL8 776 aa12.14□□□□□ -0.47
PARP1-201ENST00000366790 USH1GQ495M9 461 aa12.14□□□□□ -0.47
PARP1-201ENST00000366790 BRDTQ58F21 947 aaPredicted RBP12.14□□□□□ -0.47
PARP1-201ENST00000366790 IFIT1BQ5T764 474 aaKnown RBP12.14□□□□□ -0.47
PARP1-201ENST00000366790 OR6J1Q8NGC5 347 aa12.14□□□□□ -0.47
PARP1-201ENST00000366790 SYTL5Q8TDW5 730 aaPredicted RBP12.14□□□□□ -0.47
PARP1-201ENST00000366790 FAM161BQ96MY7 647 aa12.14□□□□□ -0.47
PARP1-201ENST00000366790 IWS1Q96ST2 819 aa12.14□□□□□ -0.47
PARP1-201ENST00000366790 NOC4LQ9BVI4 516 aaKnown RBP12.14□□□□□ -0.47
PARP1-201ENST00000366790 PPP1R12CQ9BZL4 782 aa12.14□□□□□ -0.47
PARP1-201ENST00000366790 ALDH8A1Q9H2A2 487 aaPredicted RBP12.14□□□□□ -0.47
PARP1-201ENST00000366790 HIPK3Q9H422 1215 aa12.14□□□□□ -0.47
PARP1-201ENST00000366790 JMJD4Q9H9V9 463 aa12.14□□□□□ -0.47
PARP1-201ENST00000366790 MRPL11Q9Y3B7 192 aaKnown RBP12.14□□□□□ -0.47
PARP1-201ENST00000366790 U3KPZ7 1027 aaPredicted RBP12.14□□□□□ -0.47
PARP1-201ENST00000366790 CHD9Q3L8U1 2897 aa12.14□□□□□ -0.47
PARP1-201ENST00000366790 PRUNE2Q8WUY3 3088 aa12.13□□□□□ -0.47
PARP1-201ENST00000366790 B4GALT4O60513 344 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms