RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 DBX2Q6ZNG2 339 aa4.17□□□□□ -1.74
RNU4-42P-201ENST00000364738 ADAT2Q7Z6V5 191 aaKnown RBP4.17□□□□□ -1.74
RNU4-42P-201ENST00000364738 NLGN2Q8NFZ4 835 aa4.17□□□□□ -1.74
RNU4-42P-201ENST00000364738 SPATA25Q9BR10 227 aa4.17□□□□□ -1.74
RNU4-42P-201ENST00000364738 MCMBPQ9BTE3 642 aa4.17□□□□□ -1.74
RNU4-42P-201ENST00000364738 KLHL25Q9H0H3 589 aa4.17□□□□□ -1.74
RNU4-42P-201ENST00000364738 BCAS3Q9H6U6 928 aa4.17□□□□□ -1.74
RNU4-42P-201ENST00000364738 RXFP1Q9HBX9 757 aa4.17□□□□□ -1.74
RNU4-42P-201ENST00000364738 GINM1Q9NU53 330 aa4.17□□□□□ -1.74
RNU4-42P-201ENST00000364738 USP40Q9NVE5 1235 aa4.17□□□□□ -1.74
RNU4-42P-201ENST00000364738 DDX41Q9UJV9 622 aaKnown RBP4.17□□□□□ -1.74
RNU4-42P-201ENST00000364738 PCDHB10Q9UN67 800 aa4.17□□□□□ -1.74
RNU4-42P-201ENST00000364738 EFR3BQ9Y2G0 817 aa4.17□□□□□ -1.74
RNU4-42P-201ENST00000364738 RWDD3Q9Y3V2 267 aa4.17□□□□□ -1.74
RNU4-42P-201ENST00000364738 SLC12A7Q9Y666 1083 aa4.17□□□□□ -1.74
RNU4-42P-201ENST00000364738 PRICKLE3O43900 615 aaPredicted RBP4.16□□□□□ -1.74
RNU4-42P-201ENST00000364738 PPM1BO75688 479 aa4.16□□□□□ -1.74
RNU4-42P-201ENST00000364738 EPHX1P07099 455 aa4.16□□□□□ -1.74
RNU4-42P-201ENST00000364738 ADRB1P08588 477 aa4.16□□□□□ -1.74
RNU4-42P-201ENST00000364738 PMLP29590 882 aa4.16□□□□□ -1.74
RNU4-42P-201ENST00000364738 SEPHS1P49903 392 aa4.16□□□□□ -1.74
RNU4-42P-201ENST00000364738 EIF6P56537 245 aaKnown RBP4.16□□□□□ -1.74
RNU4-42P-201ENST00000364738 KRTAP10-2P60368 255 aa4.16□□□□□ -1.74
RNU4-42P-201ENST00000364738 HTRA3P83110 453 aa4.16□□□□□ -1.74
RNU4-42P-201ENST00000364738 SLC7A5Q01650 507 aa4.16□□□□□ -1.74
RNU4-42P-201ENST00000364738 PLP2Q04941 152 aa4.16□□□□□ -1.74
RNU4-42P-201ENST00000364738 PAK2Q13177 524 aa4.16□□□□□ -1.74
RNU4-42P-201ENST00000364738 RTP5Q14D33 572 aa4.16□□□□□ -1.74
RNU4-42P-201ENST00000364738 NT5DC1Q5TFE4 455 aa4.16□□□□□ -1.74
RNU4-42P-201ENST00000364738 B3GNT8Q7Z7M8 397 aa4.16□□□□□ -1.74
RNU4-42P-201ENST00000364738 SAPCD2Q86UD0 394 aa4.16□□□□□ -1.74
RNU4-42P-201ENST00000364738 ZNF654Q8IZM8 581 aa4.16□□□□□ -1.74
RNU4-42P-201ENST00000364738 LZTR1Q8N653 840 aa4.16□□□□□ -1.74
RNU4-42P-201ENST00000364738 TSPAN17Q96FV3 270 aa4.16□□□□□ -1.74
RNU4-42P-201ENST00000364738 FGD4Q96M96 766 aa4.16□□□□□ -1.74
RNU4-42P-201ENST00000364738 FBLN5Q9UBX5 448 aa4.16□□□□□ -1.74
RNU4-42P-201ENST00000364738 CGGBP1Q9UFW8 167 aaPredicted RBP4.16□□□□□ -1.74
RNU4-42P-201ENST00000364738 NUDT5Q9UKK9 219 aa4.16□□□□□ -1.74
RNU4-42P-201ENST00000364738 BACE2Q9Y5Z0 518 aa4.16□□□□□ -1.74
RNU4-42P-201ENST00000364738 C2orf71A6NGG8 1288 aa4.15□□□□□ -1.75
RNU4-42P-201ENST00000364738 VAMP4O75379 141 aa4.15□□□□□ -1.75
RNU4-42P-201ENST00000364738 RECKO95980 971 aa4.15□□□□□ -1.75
RNU4-42P-201ENST00000364738 SOX9P48436 509 aa4.15□□□□□ -1.75
RNU4-42P-201ENST00000364738 NFKB2Q00653 900 aa4.15□□□□□ -1.75
RNU4-42P-201ENST00000364738 AMPD2Q01433 879 aa4.15□□□□□ -1.75
RNU4-42P-201ENST00000364738 TRIM26Q12899 539 aaPredicted RBP4.15□□□□□ -1.75
RNU4-42P-201ENST00000364738 C19orf47Q8N9M1 422 aaKnown RBP4.15□□□□□ -1.75
RNU4-42P-201ENST00000364738 NETO2Q8NC67 525 aa4.15□□□□□ -1.75
RNU4-42P-201ENST00000364738 ZNF526Q8TF50 670 aaPredicted RBP4.15□□□□□ -1.75
RNU4-42P-201ENST00000364738 BORCS6Q96GS4 357 aa4.15□□□□□ -1.75
RNU4-42P-201ENST00000364738 PEX11GQ96HA9 241 aa4.15□□□□□ -1.75
RNU4-42P-201ENST00000364738 SPATA32Q96LK8 384 aa4.15□□□□□ -1.75
RNU4-42P-201ENST00000364738 GULP1Q9UBP9 304 aa4.15□□□□□ -1.75
RNU4-42P-201ENST00000364738 SUGT1Q9Y2Z0 365 aa4.15□□□□□ -1.75
RNU4-42P-201ENST00000364738 NPHP3-ACAD11A0A0J9YXS1 232 aa4.14□□□□□ -1.75
RNU4-42P-201ENST00000364738 A0A1W2PQH9 124 aa4.14□□□□□ -1.75
RNU4-42P-201ENST00000364738 SH3D21A4FU49 640 aa4.14□□□□□ -1.75
RNU4-42P-201ENST00000364738 SCAMP3O14828 347 aaKnown RBP4.14□□□□□ -1.75
RNU4-42P-201ENST00000364738 GIPRP48546 466 aa4.14□□□□□ -1.75
RNU4-42P-201ENST00000364738 DLX2Q07687 328 aaPredicted RBP4.14□□□□□ -1.75
RNU4-42P-201ENST00000364738 EFEMP1Q12805 493 aa4.14□□□□□ -1.75
RNU4-42P-201ENST00000364738 GRB10Q13322 594 aa4.14□□□□□ -1.75
RNU4-42P-201ENST00000364738 PPP2R5EQ16537 467 aa4.14□□□□□ -1.75
RNU4-42P-201ENST00000364738 SPATS1Q496A3 300 aa4.14□□□□□ -1.75
RNU4-42P-201ENST00000364738 UBXN11Q5T124 520 aa4.14□□□□□ -1.75
RNU4-42P-201ENST00000364738 WWC2Q6AWC2 1192 aa4.14□□□□□ -1.75
RNU4-42P-201ENST00000364738 CPNE8Q86YQ8 564 aa4.14□□□□□ -1.75
RNU4-42P-201ENST00000364738 OR6P1Q8NGX9 317 aa4.14□□□□□ -1.75
RNU4-42P-201ENST00000364738 SMARCC2Q8TAQ2 1214 aa4.14□□□□□ -1.75
RNU4-42P-201ENST00000364738 USP33Q8TEY7 942 aa4.14□□□□□ -1.75
RNU4-42P-201ENST00000364738 GPRASP2Q96D09 838 aa4.14□□□□□ -1.75
RNU4-42P-201ENST00000364738 TRBV23OR9-2A0A075B6M9 112 aa4.13□□□□□ -1.75
RNU4-42P-201ENST00000364738 PAMP19021 973 aa4.13□□□□□ -1.75
RNU4-42P-201ENST00000364738 GJA9P57773 515 aa4.13□□□□□ -1.75
RNU4-42P-201ENST00000364738 SLC9A5Q14940 896 aa4.13□□□□□ -1.75
RNU4-42P-201ENST00000364738 FERMT3Q86UX7 667 aa4.13□□□□□ -1.75
RNU4-42P-201ENST00000364738 CARFQ8N187 725 aa4.13□□□□□ -1.75
RNU4-42P-201ENST00000364738 ARHGEF39Q8N4T4 335 aa4.13□□□□□ -1.75
RNU4-42P-201ENST00000364738 RASGRP4Q8TDF6 673 aa4.13□□□□□ -1.75
RNU4-42P-201ENST00000364738 CPA5Q8WXQ8 436 aa4.13□□□□□ -1.75
RNU4-42P-201ENST00000364738 KLHL6Q8WZ60 621 aa4.13□□□□□ -1.75
RNU4-42P-201ENST00000364738 MTA3Q9BTC8 594 aa4.13□□□□□ -1.75
RNU4-42P-201ENST00000364738 K7ESM1 405 aa4.12□□□□□ -1.75
RNU4-42P-201ENST00000364738 NPHS1O60500 1241 aa4.12□□□□□ -1.75
RNU4-42P-201ENST00000364738 ZBTB7AO95365 584 aa4.12□□□□□ -1.75
RNU4-42P-201ENST00000364738 CNR2P34972 360 aa4.12□□□□□ -1.75
RNU4-42P-201ENST00000364738 MFAP1P55081 439 aaKnown RBP4.12□□□□□ -1.75
RNU4-42P-201ENST00000364738 RBM10P98175 930 aaKnown RBP4.12□□□□□ -1.75
RNU4-42P-201ENST00000364738 CACNB2Q08289 660 aaPredicted RBP4.12□□□□□ -1.75
RNU4-42P-201ENST00000364738 ZFYVE27Q5T4F4 411 aa4.12□□□□□ -1.75
RNU4-42P-201ENST00000364738 GGNQ86UU5 652 aa4.12□□□□□ -1.75
RNU4-42P-201ENST00000364738 METTL16Q86W50 562 aaKnown RBP4.12□□□□□ -1.75
RNU4-42P-201ENST00000364738 CPLX3Q8WVH0 158 aa4.12□□□□□ -1.75
RNU4-42P-201ENST00000364738 DDX1Q92499 740 aaKnown RBP4.12□□□□□ -1.75
RNU4-42P-201ENST00000364738 ZBTB8AQ96BR9 441 aa4.12□□□□□ -1.75
RNU4-42P-201ENST00000364738 RCC1LQ96I51 464 aaKnown RBP4.12□□□□□ -1.75
RNU4-42P-201ENST00000364738 NOX5Q96PH1 765 aa4.12□□□□□ -1.75
RNU4-42P-201ENST00000364738 NTMQ9P121 344 aa4.12□□□□□ -1.75
RNU4-42P-201ENST00000364738 APEX2Q9UBZ4 518 aa4.12□□□□□ -1.75
RNU4-42P-201ENST00000364738 ZBTB7CA1YPR0 619 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms