RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 CUEDC2Q9H467 287 aa25.4■■□□□ 1.66
LDB1-201ENST00000361198 KANSL2Q9H9L4 492 aa25.4■■□□□ 1.66
LDB1-201ENST00000361198 ZNF446Q9NWS9 450 aa25.4■■□□□ 1.66
LDB1-201ENST00000361198 STK32BQ9NY57 414 aa25.4■■□□□ 1.66
LDB1-201ENST00000361198 CALCRLQ16602 461 aa25.39■■□□□ 1.66
LDB1-201ENST00000361198 ADSSL1Q8N142 457 aa25.39■■□□□ 1.66
LDB1-201ENST00000361198 NYAP2Q9P242 653 aa25.39■■□□□ 1.66
LDB1-201ENST00000361198 C21orf2O43822 256 aa25.39■■□□□ 1.65
LDB1-201ENST00000361198 PBX1P40424 430 aa25.39■■□□□ 1.65
LDB1-201ENST00000361198 TNNI2P48788 182 aa25.39■■□□□ 1.65
LDB1-201ENST00000361198 CLK2P49760 499 aaKnown RBP25.39■■□□□ 1.65
LDB1-201ENST00000361198 SEPT2Q15019 361 aa25.39■■□□□ 1.65
LDB1-201ENST00000361198 SIAH1Q8IUQ4 282 aa25.39■■□□□ 1.65
LDB1-201ENST00000361198 TRIM34Q9BYJ4 488 aa25.39■■□□□ 1.65
LDB1-201ENST00000361198 PPIP5K2O43314 1243 aa25.38■■□□□ 1.65
LDB1-201ENST00000361198 RHOBTB3O94955 611 aa25.38■■□□□ 1.65
LDB1-201ENST00000361198 KIF20AO95235 890 aa25.38■■□□□ 1.65
LDB1-201ENST00000361198 SLC1A4P43007 532 aa25.38■■□□□ 1.65
LDB1-201ENST00000361198 CUL5Q93034 780 aa25.38■■□□□ 1.65
LDB1-201ENST00000361198 PRMT6Q96LA8 375 aaPredicted RBP25.38■■□□□ 1.65
LDB1-201ENST00000361198 MAGEF1Q9HAY2 307 aa25.38■■□□□ 1.65
LDB1-201ENST00000361198 LRRC10BA6NIK2 292 aa25.37■■□□□ 1.65
LDB1-201ENST00000361198 GDF11O95390 407 aa25.37■■□□□ 1.65
LDB1-201ENST00000361198 KRT31Q15323 416 aa25.37■■□□□ 1.65
LDB1-201ENST00000361198 FILIP1LQ4L180 1135 aa25.37■■□□□ 1.65
LDB1-201ENST00000361198 PDGFDQ9GZP0 370 aaPredicted RBP25.37■■□□□ 1.65
LDB1-201ENST00000361198 LIMA1Q9UHB6 759 aaKnown RBP25.37■■□□□ 1.65
LDB1-201ENST00000361198 CCT6AP40227 531 aaKnown RBP25.37■■□□□ 1.65
LDB1-201ENST00000361198 SLFN13Q68D06 897 aa25.37■■□□□ 1.65
LDB1-201ENST00000361198 CC2D2BQ6DHV5 1058 aa25.37■■□□□ 1.65
LDB1-201ENST00000361198 TRIM9Q9C026 710 aa25.37■■□□□ 1.65
LDB1-201ENST00000361198 TRIM49BA6NDI0 452 aa25.36■■□□□ 1.65
LDB1-201ENST00000361198 URI1O94763 535 aaPredicted RBP25.36■■□□□ 1.65
LDB1-201ENST00000361198 MRPL12P52815 198 aaKnown RBP25.36■■□□□ 1.65
LDB1-201ENST00000361198 ICA1Q05084 483 aa25.36■■□□□ 1.65
LDB1-201ENST00000361198 ARHGAP29Q52LW3 1261 aa25.36■■□□□ 1.65
LDB1-201ENST00000361198 GIMAP8Q8ND71 665 aaPredicted RBP25.36■■□□□ 1.65
LDB1-201ENST00000361198 PSTPIP2Q9H939 334 aa25.36■■□□□ 1.65
LDB1-201ENST00000361198 LRWD1Q9UFC0 647 aa25.36■■□□□ 1.65
LDB1-201ENST00000361198 TADA3O75528 432 aa25.35■■□□□ 1.65
LDB1-201ENST00000361198 FXR2P51116 673 aaKnown RBP eCLIP25.35■■□□□ 1.65
LDB1-201ENST00000361198 PMS1P54277 932 aaKnown RBP25.35■■□□□ 1.65
LDB1-201ENST00000361198 QRICH1Q2TAL8 776 aa25.35■■□□□ 1.65
LDB1-201ENST00000361198 SUPT20HQ8NEM7 779 aa25.35■■□□□ 1.65
LDB1-201ENST00000361198 DCAF4Q8WV16 495 aa25.35■■□□□ 1.65
LDB1-201ENST00000361198 UBXN4Q92575 508 aa25.35■■□□□ 1.65
LDB1-201ENST00000361198 PANX2Q96RD6 677 aa25.35■■□□□ 1.65
LDB1-201ENST00000361198 MYH7BA7E2Y1 1941 aa25.35■■□□□ 1.65
LDB1-201ENST00000361198 EFCAB8A8MWE9 144 aa25.35■■□□□ 1.65
LDB1-201ENST00000361198 TCP11X2Q5H9J9 407 aa25.35■■□□□ 1.65
LDB1-201ENST00000361198 TMEM179Q6ZVK1 233 aa25.35■■□□□ 1.65
LDB1-201ENST00000361198 CALML4Q96GE6 196 aa25.35■■□□□ 1.65
LDB1-201ENST00000361198 RGS17Q9UGC6 210 aaPredicted RBP25.35■■□□□ 1.65
LDB1-201ENST00000361198 AKR1B15C9JRZ8 316 aaPredicted RBP25.34■■□□□ 1.65
LDB1-201ENST00000361198 CLCN6P51797 869 aa25.34■■□□□ 1.65
LDB1-201ENST00000361198 RBL2Q08999 1139 aa25.34■■□□□ 1.65
LDB1-201ENST00000361198 TOGARAM2Q6ZUX3 1019 aa25.34■■□□□ 1.65
LDB1-201ENST00000361198 POTEMA6NI47 508 aa25.34■■□□□ 1.65
LDB1-201ENST00000361198 KCNJ18B7U540 433 aa25.34■■□□□ 1.65
LDB1-201ENST00000361198 SPAG1Q07617 926 aa25.34■■□□□ 1.65
LDB1-201ENST00000361198 GRB10Q13322 594 aa25.34■■□□□ 1.65
LDB1-201ENST00000361198 KCNJ12Q14500 433 aa25.34■■□□□ 1.65
LDB1-201ENST00000361198 ABCB5Q2M3G0 1257 aa25.34■■□□□ 1.65
LDB1-201ENST00000361198 PPP4R3AQ6IN85 833 aa25.34■■□□□ 1.65
LDB1-201ENST00000361198 C7orf25Q9BPX7 421 aa25.34■■□□□ 1.65
LDB1-201ENST00000361198 VPS16Q9H269 839 aa25.34■■□□□ 1.65
LDB1-201ENST00000361198 ATRNL1Q5VV63 1379 aa25.33■■□□□ 1.65
LDB1-201ENST00000361198 H7C1D1 291 aa25.33■■□□□ 1.65
LDB1-201ENST00000361198 N4BP3O15049 544 aa25.33■■□□□ 1.65
LDB1-201ENST00000361198 ENTPD3O75355 529 aa25.33■■□□□ 1.65
LDB1-201ENST00000361198 JAG1P78504 1218 aa25.33■■□□□ 1.65
LDB1-201ENST00000361198 MAP3K9P80192 1104 aa25.33■■□□□ 1.65
LDB1-201ENST00000361198 SEMA3FQ13275 785 aa25.33■■□□□ 1.65
LDB1-201ENST00000361198 BMS1Q14692 1282 aaKnown RBP25.33■■□□□ 1.65
LDB1-201ENST00000361198 TMEM266Q2M3C6 531 aa25.33■■□□□ 1.65
LDB1-201ENST00000361198 IRF2BP1Q8IU81 584 aa25.33■■□□□ 1.65
LDB1-201ENST00000361198 CREBRFQ8IUR6 639 aa25.33■■□□□ 1.65
LDB1-201ENST00000361198 MNS1Q8NEH6 495 aa25.33■■□□□ 1.65
LDB1-201ENST00000361198 F5H6K3 240 aa25.33■■□□□ 1.64
LDB1-201ENST00000361198 COPB1P53618 953 aaKnown RBP25.33■■□□□ 1.64
LDB1-201ENST00000361198 KLRC3Q07444 240 aa25.33■■□□□ 1.64
LDB1-201ENST00000361198 CPLX3Q8WVH0 158 aa25.33■■□□□ 1.64
LDB1-201ENST00000361198 WDR24Q96S15 920 aa25.33■■□□□ 1.64
LDB1-201ENST00000361198 TAB2Q9NYJ8 693 aa25.33■■□□□ 1.64
LDB1-201ENST00000361198 PCDHA1Q9Y5I3 950 aa25.33■■□□□ 1.64
LDB1-201ENST00000361198 USP17L15C9J2P7 530 aa25.32■■□□□ 1.64
LDB1-201ENST00000361198 USP17L13C9JLJ4 530 aa25.32■■□□□ 1.64
LDB1-201ENST00000361198 USP17L11C9JVI0 530 aa25.32■■□□□ 1.64
LDB1-201ENST00000361198 USP17L18D6R9N7 530 aa25.32■■□□□ 1.64
LDB1-201ENST00000361198 USP17L22D6RA61 530 aa25.32■■□□□ 1.64
LDB1-201ENST00000361198 USP17L17D6RBQ6 530 aa25.32■■□□□ 1.64
LDB1-201ENST00000361198 USP17L19D6RCP7 530 aa25.32■■□□□ 1.64
LDB1-201ENST00000361198 USP17L20D6RJB6 530 aa25.32■■□□□ 1.64
LDB1-201ENST00000361198 USP17L24Q0WX57 530 aa25.32■■□□□ 1.64
LDB1-201ENST00000361198 CDC37Q16543 378 aaPredicted RBP25.32■■□□□ 1.64
LDB1-201ENST00000361198 USP17L6PQ6QN14 398 aa25.32■■□□□ 1.64
LDB1-201ENST00000361198 POTEAQ6S8J7 498 aa25.32■■□□□ 1.64
LDB1-201ENST00000361198 PPFIBP1Q86W92 1011 aa25.32■■□□□ 1.64
LDB1-201ENST00000361198 PNMA5Q96PV4 448 aa25.32■■□□□ 1.64
LDB1-201ENST00000361198 ATF5Q9Y2D1 282 aaPredicted RBP25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms