RNA–Protein interactions for RNA: ENST00000360958.6

TPM2-202, Transcript of tropomyosin 2, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene TPM2, Length 1,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-202ENST00000360958 CNTN2Q02246 1040 aa17.28■□□□□ 0.36
TPM2-202ENST00000360958 HOMER1Q86YM7 354 aa17.28■□□□□ 0.36
TPM2-202ENST00000360958 CCDC144CPQ8IYA2 1237 aa17.28■□□□□ 0.36
TPM2-202ENST00000360958 RBM27Q9P2N5 1060 aaKnown RBP17.28■□□□□ 0.36
TPM2-202ENST00000360958 ASTN1O14525 1302 aa17.27■□□□□ 0.36
TPM2-202ENST00000360958 KIAA0100Q14667 2235 aaKnown RBP17.27■□□□□ 0.36
TPM2-202ENST00000360958 POTEFA5A3E0 1075 aa17.27■□□□□ 0.36
TPM2-202ENST00000360958 hCG_1984214I3L0E3 225 aa17.27■□□□□ 0.36
TPM2-202ENST00000360958 SEPT4O43236 478 aa17.27■□□□□ 0.36
TPM2-202ENST00000360958 TAL1P17542 331 aaPredicted RBP17.27■□□□□ 0.36
TPM2-202ENST00000360958 SLC30A10Q6XR72 485 aa17.27■□□□□ 0.36
TPM2-202ENST00000360958 ZNF713Q8N859 430 aaPredicted RBP17.27■□□□□ 0.36
TPM2-202ENST00000360958 U2AF1L4Q8WU68 220 aaKnown RBP17.27■□□□□ 0.36
TPM2-202ENST00000360958 ABHD16BQ9H3Z7 469 aa17.27■□□□□ 0.36
TPM2-202ENST00000360958 CNPY2Q9Y2B0 182 aa17.27■□□□□ 0.36
TPM2-202ENST00000360958 BAZ2BQ9UIF8 2168 aaKnown RBP17.26■□□□□ 0.35
TPM2-202ENST00000360958 PTPDC1A2A3K4 754 aa17.26■□□□□ 0.35
TPM2-202ENST00000360958 SNAI1O95863 264 aaPredicted RBP17.26■□□□□ 0.35
TPM2-202ENST00000360958 ZNF865P0CJ78 1059 aaPredicted RBP17.26■□□□□ 0.35
TPM2-202ENST00000360958 EDNRBP24530 442 aa17.26■□□□□ 0.35
TPM2-202ENST00000360958 LHX8Q68G74 356 aa17.26■□□□□ 0.35
TPM2-202ENST00000360958 ARMCX2Q7L311 632 aa17.26■□□□□ 0.35
TPM2-202ENST00000360958 RAB11FIP4Q86YS3 637 aa17.26■□□□□ 0.35
TPM2-202ENST00000360958 ANKLE1Q8NAG6 615 aa17.26■□□□□ 0.35
TPM2-202ENST00000360958 TRPV1Q8NER1 839 aa17.26■□□□□ 0.35
TPM2-202ENST00000360958 C22orf23Q9BZE7 217 aa17.26■□□□□ 0.35
TPM2-202ENST00000360958 KATNBL1Q9H079 304 aa17.26■□□□□ 0.35
TPM2-202ENST00000360958 OGDHLQ9ULD0 1010 aa17.26■□□□□ 0.35
TPM2-202ENST00000360958 B4DLN1 442 aa17.25■□□□□ 0.35
TPM2-202ENST00000360958 PIK3CDO00329 1044 aa17.25■□□□□ 0.35
TPM2-202ENST00000360958 IFNAR1P17181 557 aa17.25■□□□□ 0.35
TPM2-202ENST00000360958 CCND3P30281 292 aaPredicted RBP17.25■□□□□ 0.35
TPM2-202ENST00000360958 ADD1P35611 737 aaKnown RBP17.25■□□□□ 0.35
TPM2-202ENST00000360958 ALDH5A1P51649 535 aaPredicted RBP17.25■□□□□ 0.35
TPM2-202ENST00000360958 MRPL12P52815 198 aaKnown RBP17.25■□□□□ 0.35
TPM2-202ENST00000360958 SOX10P56693 466 aa17.25■□□□□ 0.35
TPM2-202ENST00000360958 NTRK3Q16288 839 aa17.25■□□□□ 0.35
TPM2-202ENST00000360958 PPP1R18Q6NYC8 613 aa17.25■□□□□ 0.35
TPM2-202ENST00000360958 CMTR1Q8N1G2 835 aaKnown RBP17.25■□□□□ 0.35
TPM2-202ENST00000360958 SYTL5Q8TDW5 730 aaPredicted RBP17.25■□□□□ 0.35
TPM2-202ENST00000360958 SHISA4Q96DD7 197 aa17.25■□□□□ 0.35
TPM2-202ENST00000360958 DEFB118Q96PH6 123 aa17.25■□□□□ 0.35
TPM2-202ENST00000360958 MPHOSPH6Q99547 160 aaKnown RBP17.25■□□□□ 0.35
TPM2-202ENST00000360958 KIF2CQ99661 725 aa17.25■□□□□ 0.35
TPM2-202ENST00000360958 UPF2Q9HAU5 1272 aaKnown RBP17.25■□□□□ 0.35
TPM2-202ENST00000360958 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.25■□□□□ 0.35
TPM2-202ENST00000360958 DDX20Q9UHI6 824 aaKnown RBP17.25■□□□□ 0.35
TPM2-202ENST00000360958 ACVR2BQ13705 512 aa17.24■□□□□ 0.35
TPM2-202ENST00000360958 UBE2Q1Q7Z7E8 422 aa17.24■□□□□ 0.35
TPM2-202ENST00000360958 IWS1Q96ST2 819 aa17.24■□□□□ 0.35
TPM2-202ENST00000360958 RNF26Q9BY78 433 aaPredicted RBP17.24■□□□□ 0.35
TPM2-202ENST00000360958 LRRC37A2A6NM11 1700 aa17.24■□□□□ 0.35
TPM2-202ENST00000360958 GCOM1H8Y6P7 765 aaPredicted RBP17.23■□□□□ 0.35
TPM2-202ENST00000360958 PRPF3O43395 683 aaKnown RBP17.23■□□□□ 0.35
TPM2-202ENST00000360958 POLR2MP0CAP2 368 aa17.23■□□□□ 0.35
TPM2-202ENST00000360958 AKR1A1P14550 325 aa17.23■□□□□ 0.35
TPM2-202ENST00000360958 EN2P19622 333 aaPredicted RBP17.23■□□□□ 0.35
TPM2-202ENST00000360958 CALML3P27482 149 aa17.23■□□□□ 0.35
TPM2-202ENST00000360958 NEK4P51957 841 aa17.23■□□□□ 0.35
TPM2-202ENST00000360958 FAM177A1Q8N128 213 aaPredicted RBP17.23■□□□□ 0.35
TPM2-202ENST00000360958 NSUN6Q8TEA1 469 aaKnown RBP17.23■□□□□ 0.35
TPM2-202ENST00000360958 TBC1D5Q92609 795 aa17.23■□□□□ 0.35
TPM2-202ENST00000360958 VTA1Q9NP79 307 aa17.23■□□□□ 0.35
TPM2-202ENST00000360958 NAP1L2Q9ULW6 460 aaPredicted RBP17.23■□□□□ 0.35
TPM2-202ENST00000360958 FRMPD4Q14CM0 1322 aa17.22■□□□□ 0.35
TPM2-202ENST00000360958 FRMPD3Q5JV73 1810 aa17.22■□□□□ 0.35
TPM2-202ENST00000360958 PFKFB2O60825 505 aa17.22■□□□□ 0.35
TPM2-202ENST00000360958 CFBP00751 764 aa17.22■□□□□ 0.35
TPM2-202ENST00000360958 MYCP01106 439 aaPredicted RBP17.22■□□□□ 0.35
TPM2-202ENST00000360958 AK2P54819 239 aa17.22■□□□□ 0.35
TPM2-202ENST00000360958 PFKFB3Q16875 520 aaPredicted RBP17.22■□□□□ 0.35
TPM2-202ENST00000360958 CCDC82Q8N4S0 544 aa17.22■□□□□ 0.35
TPM2-202ENST00000360958 BACH2Q9BYV9 841 aa17.22■□□□□ 0.35
TPM2-202ENST00000360958 GLT8D2Q9H1C3 349 aa17.22■□□□□ 0.35
TPM2-202ENST00000360958 BARHL2Q9NY43 387 aa17.22■□□□□ 0.35
TPM2-202ENST00000360958 COL20A1Q9P218 1284 aa17.22■□□□□ 0.35
TPM2-202ENST00000360958 V9GY48 417 aaPredicted RBP17.22■□□□□ 0.35
TPM2-202ENST00000360958 NKX3-2P78367 333 aa17.21■□□□□ 0.35
TPM2-202ENST00000360958 PRAMEF19Q5SWL8 479 aa17.21■□□□□ 0.35
TPM2-202ENST00000360958 WWC2Q6AWC2 1192 aa17.21■□□□□ 0.35
TPM2-202ENST00000360958 CPLX2Q6PUV4 134 aaKnown RBP17.21■□□□□ 0.35
TPM2-202ENST00000360958 TBC1D32Q96NH3 1257 aa17.21■□□□□ 0.35
TPM2-202ENST00000360958 PURBQ96QR8 312 aaKnown RBP17.21■□□□□ 0.35
TPM2-202ENST00000360958 RMDN3Q96TC7 470 aa17.21■□□□□ 0.35
TPM2-202ENST00000360958 PXMP2Q9NR77 195 aa17.21■□□□□ 0.35
TPM2-202ENST00000360958 FAM184BQ9ULE4 1060 aa17.21■□□□□ 0.35
TPM2-202ENST00000360958 TPCN1Q9ULQ1 816 aa17.21■□□□□ 0.35
TPM2-202ENST00000360958 MCM3APO60318 1980 aa17.2■□□□□ 0.34
TPM2-202ENST00000360958 RBM47A0AV96 593 aaKnown RBP17.2■□□□□ 0.34
TPM2-202ENST00000360958 ESYT2A0FGR8 921 aa17.2■□□□□ 0.34
TPM2-202ENST00000360958 MEIS2O14770 477 aa17.2■□□□□ 0.34
TPM2-202ENST00000360958 CAPN15O75808 1086 aa17.2■□□□□ 0.34
TPM2-202ENST00000360958 TFRCP02786 760 aaKnown RBP17.2■□□□□ 0.34
TPM2-202ENST00000360958 SCG2P13521 617 aa17.2■□□□□ 0.34
TPM2-202ENST00000360958 CNGA1P29973 690 aa17.2■□□□□ 0.34
TPM2-202ENST00000360958 PKN1Q16512 942 aa17.2■□□□□ 0.34
TPM2-202ENST00000360958 IQSEC1Q6DN90 963 aa17.2■□□□□ 0.34
TPM2-202ENST00000360958 HEATR3Q7Z4Q2 680 aa17.2■□□□□ 0.34
TPM2-202ENST00000360958 PIBF1Q8WXW3 757 aa17.2■□□□□ 0.34
TPM2-202ENST00000360958 TAAR1Q96RJ0 339 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms