RNA–Protein interactions for RNA: ENST00000360688.3

GDPD3-201, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

TSL 1 (best)

Gene GDPD3, Length 1,306 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-201ENST00000360688 FAM227BQ96M60 508 aa17.74■□□□□ 0.43
GDPD3-201ENST00000360688 GAS2L1Q99501 681 aaPredicted RBP17.74■□□□□ 0.43
GDPD3-201ENST00000360688 PRDM12Q9H4Q4 367 aa17.74■□□□□ 0.43
GDPD3-201ENST00000360688 GPCPD1Q9NPB8 672 aa17.74■□□□□ 0.43
GDPD3-201ENST00000360688 FRMPD2Q68DX3 1309 aaPredicted RBP17.74■□□□□ 0.43
GDPD3-201ENST00000360688 A0A0D9SFI3 127 aa17.73■□□□□ 0.43
GDPD3-201ENST00000360688 WNT8AQ9H1J5 351 aa17.73■□□□□ 0.43
GDPD3-201ENST00000360688 MTIF3Q9H2K0 278 aaKnown RBP17.73■□□□□ 0.43
GDPD3-201ENST00000360688 TCP11L1Q9NUJ3 509 aa17.73■□□□□ 0.43
GDPD3-201ENST00000360688 ADD3Q9UEY8 706 aaKnown RBP17.73■□□□□ 0.43
GDPD3-201ENST00000360688 MSRAQ9UJ68 235 aa17.73■□□□□ 0.43
GDPD3-201ENST00000360688 TRANK1O15050 2925 aa17.73■□□□□ 0.43
GDPD3-201ENST00000360688 SCN5AQ14524 2016 aa17.73■□□□□ 0.43
GDPD3-201ENST00000360688 LOC102724159A0A0B4J2E5 919 aa17.72■□□□□ 0.43
GDPD3-201ENST00000360688 HSPD1P10809 573 aaKnown RBP17.72■□□□□ 0.43
GDPD3-201ENST00000360688 PWP2Q15269 919 aaKnown RBP17.72■□□□□ 0.43
GDPD3-201ENST00000360688 RAB30Q15771 203 aa17.72■□□□□ 0.43
GDPD3-201ENST00000360688 MCMDC2Q4G0Z9 681 aa17.72■□□□□ 0.43
GDPD3-201ENST00000360688 OTOP2Q7RTS6 562 aa17.72■□□□□ 0.43
GDPD3-201ENST00000360688 YTHDC1Q96MU7 727 aaKnown RBP17.72■□□□□ 0.43
GDPD3-201ENST00000360688 WDR11Q9BZH6 1224 aa17.72■□□□□ 0.43
GDPD3-201ENST00000360688 ALDH8A1Q9H2A2 487 aaPredicted RBP17.72■□□□□ 0.43
GDPD3-201ENST00000360688 PRDM6Q9NQX0 595 aa17.72■□□□□ 0.43
GDPD3-201ENST00000360688 SCN10AQ9Y5Y9 1956 aa17.72■□□□□ 0.43
GDPD3-201ENST00000360688 RBM47A0AV96 593 aaKnown RBP17.72■□□□□ 0.43
GDPD3-201ENST00000360688 PTPDC1A2A3K4 754 aa17.72■□□□□ 0.43
GDPD3-201ENST00000360688 PDHBP11177 359 aa17.72■□□□□ 0.43
GDPD3-201ENST00000360688 RRP1P56182 461 aaKnown RBP17.72■□□□□ 0.43
GDPD3-201ENST00000360688 TJAP1Q5JTD0 557 aa17.72■□□□□ 0.43
GDPD3-201ENST00000360688 AKNAD1Q5T1N1 836 aa17.72■□□□□ 0.43
GDPD3-201ENST00000360688 SLC30A10Q6XR72 485 aa17.72■□□□□ 0.43
GDPD3-201ENST00000360688 ZNF589Q86UQ0 364 aaPredicted RBP17.72■□□□□ 0.43
GDPD3-201ENST00000360688 CLEC4DQ8WXI8 215 aa17.72■□□□□ 0.43
GDPD3-201ENST00000360688 PPM1EQ8WY54 764 aa17.72■□□□□ 0.43
GDPD3-201ENST00000360688 VWCEQ96DN2 955 aa17.72■□□□□ 0.43
GDPD3-201ENST00000360688 NKX2-4Q9H2Z4 354 aa17.72■□□□□ 0.43
GDPD3-201ENST00000360688 YBX2Q9Y2T7 364 aaKnown RBP17.72■□□□□ 0.43
GDPD3-201ENST00000360688 ZMYM6O95789 1325 aa17.71■□□□□ 0.43
GDPD3-201ENST00000360688 HAND2P61296 217 aa17.71■□□□□ 0.42
GDPD3-201ENST00000360688 PURAQ00577 322 aaKnown RBP17.71■□□□□ 0.42
GDPD3-201ENST00000360688 ZNF543Q08ER8 600 aa17.71■□□□□ 0.42
GDPD3-201ENST00000360688 NMIQ13287 307 aaPredicted RBP17.71■□□□□ 0.42
GDPD3-201ENST00000360688 ADGRE1Q14246 886 aa17.71■□□□□ 0.42
GDPD3-201ENST00000360688 TICAM2Q86XR7 235 aa17.71■□□□□ 0.42
GDPD3-201ENST00000360688 RPUSD2Q8IZ73 545 aaKnown RBP17.71■□□□□ 0.42
GDPD3-201ENST00000360688 SCLYQ96I15 445 aa17.71■□□□□ 0.42
GDPD3-201ENST00000360688 CRBNQ96SW2 442 aa17.71■□□□□ 0.42
GDPD3-201ENST00000360688 POLR3EQ9NVU0 708 aa17.71■□□□□ 0.42
GDPD3-201ENST00000360688 CALML3P27482 149 aa17.7■□□□□ 0.42
GDPD3-201ENST00000360688 CPT1AP50416 773 aa17.7■□□□□ 0.42
GDPD3-201ENST00000360688 HDAC1Q13547 482 aaPredicted RBP17.7■□□□□ 0.42
GDPD3-201ENST00000360688 RNF207Q6ZRF8 634 aa17.7■□□□□ 0.42
GDPD3-201ENST00000360688 TTC14Q96N46 770 aa17.7■□□□□ 0.42
GDPD3-201ENST00000360688 SLC28A3Q9HAS3 691 aa17.7■□□□□ 0.42
GDPD3-201ENST00000360688 TRMT13Q9NUP7 481 aaKnown RBP17.7■□□□□ 0.42
GDPD3-201ENST00000360688 PNMA2Q9UL42 364 aa17.7■□□□□ 0.42
GDPD3-201ENST00000360688 SLC4A7Q9Y6M7 1214 aa17.7■□□□□ 0.42
GDPD3-201ENST00000360688 TNKSO95271 1327 aa17.69■□□□□ 0.42
GDPD3-201ENST00000360688 NCOR1O75376 2440 aa17.69■□□□□ 0.42
GDPD3-201ENST00000360688 MYL3P08590 195 aa17.69■□□□□ 0.42
GDPD3-201ENST00000360688 SUPT20HL2P0C7V6 817 aa17.69■□□□□ 0.42
GDPD3-201ENST00000360688 SNHG28P0DPA3 235 aa17.69■□□□□ 0.42
GDPD3-201ENST00000360688 CYP2C9P11712 490 aa17.69■□□□□ 0.42
GDPD3-201ENST00000360688 RPS6P62753 249 aaKnown RBP17.69■□□□□ 0.42
GDPD3-201ENST00000360688 MFSD6Q6ZSS7 791 aa17.69■□□□□ 0.42
GDPD3-201ENST00000360688 OR6J1Q8NGC5 347 aa17.69■□□□□ 0.42
GDPD3-201ENST00000360688 WDR19Q8NEZ3 1342 aa17.69■□□□□ 0.42
GDPD3-201ENST00000360688 MYH6P13533 1939 aa17.68■□□□□ 0.42
GDPD3-201ENST00000360688 PCP11498 1178 aaKnown RBP17.68■□□□□ 0.42
GDPD3-201ENST00000360688 IGFBP4P22692 258 aa17.68■□□□□ 0.42
GDPD3-201ENST00000360688 EDNRBP24530 442 aa17.68■□□□□ 0.42
GDPD3-201ENST00000360688 RABGGTBP53611 331 aa17.68■□□□□ 0.42
GDPD3-201ENST00000360688 PDE4DQ08499 809 aa17.68■□□□□ 0.42
GDPD3-201ENST00000360688 TBC1D10CQ8IV04 446 aa17.68■□□□□ 0.42
GDPD3-201ENST00000360688 MTG1Q9BT17 334 aaPredicted RBP17.68■□□□□ 0.42
GDPD3-201ENST00000360688 GPHNQ9NQX3 736 aaPredicted RBP17.68■□□□□ 0.42
GDPD3-201ENST00000360688 CCDC171Q6TFL3 1326 aa17.68■□□□□ 0.42
GDPD3-201ENST00000360688 TRIP12Q14669 1992 aaPredicted RBP17.67■□□□□ 0.42
GDPD3-201ENST00000360688 ZBBXA8MT70 800 aa17.67■□□□□ 0.42
GDPD3-201ENST00000360688 NKRFO15226 690 aaKnown RBP eCLIP17.67■□□□□ 0.42
GDPD3-201ENST00000360688 PPP2R5BQ15173 497 aa17.67■□□□□ 0.42
GDPD3-201ENST00000360688 CCDC85BQ15834 202 aaPredicted RBP17.67■□□□□ 0.42
GDPD3-201ENST00000360688 LAMA4Q16363 1823 aa17.67■□□□□ 0.42
GDPD3-201ENST00000360688 NBPF20Q3BBV1 942 aa17.67■□□□□ 0.42
GDPD3-201ENST00000360688 DNERQ8NFT8 737 aa17.67■□□□□ 0.42
GDPD3-201ENST00000360688 SCFD2Q8WU76 684 aa17.67■□□□□ 0.42
GDPD3-201ENST00000360688 ATXN2LQ8WWM7 1075 aaKnown RBP17.67■□□□□ 0.42
GDPD3-201ENST00000360688 COPS5Q92905 334 aa17.67■□□□□ 0.42
GDPD3-201ENST00000360688 TANC1Q9C0D5 1861 aa17.67■□□□□ 0.42
GDPD3-201ENST00000360688 THEGQ9P2T0 379 aa17.67■□□□□ 0.42
GDPD3-201ENST00000360688 PCDHA11Q9Y5I1 949 aa17.67■□□□□ 0.42
GDPD3-201ENST00000360688 TET1Q8NFU7 2136 aa17.66■□□□□ 0.42
GDPD3-201ENST00000360688 NEDD4P46934 1319 aa17.66■□□□□ 0.42
GDPD3-201ENST00000360688 A6NJR5 290 aa17.66■□□□□ 0.42
GDPD3-201ENST00000360688 TRIM6-TRIM34B2RNG4 842 aa17.66■□□□□ 0.42
GDPD3-201ENST00000360688 PFKMP08237 780 aa17.66■□□□□ 0.42
GDPD3-201ENST00000360688 MYOGP15173 224 aa17.66■□□□□ 0.42
GDPD3-201ENST00000360688 TTLL4Q14679 1199 aa17.66■□□□□ 0.42
GDPD3-201ENST00000360688 BRDTQ58F21 947 aaPredicted RBP17.66■□□□□ 0.42
GDPD3-201ENST00000360688 DEFB128Q7Z7B8 93 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms