RNA–Protein interactions for RNA: ENST00000360238.6

CUEDC1-201, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CUEDC1, Length 2,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-201ENST00000360238 BMS1Q14692 1282 aaKnown RBP29.52■■■□□ 2.32
CUEDC1-201ENST00000360238 HHIPL2Q6UWX4 724 aa29.52■■■□□ 2.32
CUEDC1-201ENST00000360238 RAB34Q9BZG1 259 aa29.52■■■□□ 2.32
CUEDC1-201ENST00000360238 ZMYND15Q9H091 742 aa29.52■■■□□ 2.32
CUEDC1-201ENST00000360238 RIC8AQ9NPQ8 531 aa29.52■■■□□ 2.32
CUEDC1-201ENST00000360238 LRWD1Q9UFC0 647 aa29.52■■■□□ 2.32
CUEDC1-201ENST00000360238 A0A0U1RQJ8 604 aa29.52■■■□□ 2.32
CUEDC1-201ENST00000360238 SHMT1P34896 483 aa29.52■■■□□ 2.32
CUEDC1-201ENST00000360238 TXKP42681 527 aa29.52■■■□□ 2.32
CUEDC1-201ENST00000360238 UTP14CQ5TAP6 766 aaKnown RBP29.52■■■□□ 2.32
CUEDC1-201ENST00000360238 OR8K1Q8NGG5 319 aa29.52■■■□□ 2.32
CUEDC1-201ENST00000360238 ATRIPQ8WXE1 791 aa29.52■■■□□ 2.32
CUEDC1-201ENST00000360238 CAPN11Q9UMQ6 739 aa29.52■■■□□ 2.32
CUEDC1-201ENST00000360238 TTC26A0AVF1 554 aa29.51■■■□□ 2.31
CUEDC1-201ENST00000360238 STK4Q13043 487 aa29.51■■■□□ 2.31
CUEDC1-201ENST00000360238 GPATCH4Q5T3I0 446 aaKnown RBP29.51■■■□□ 2.31
CUEDC1-201ENST00000360238 JMJD4Q9H9V9 463 aa29.51■■■□□ 2.31
CUEDC1-201ENST00000360238 LUC7L2Q9Y383 392 aaKnown RBP29.51■■■□□ 2.31
CUEDC1-201ENST00000360238 EIF6P56537 245 aaKnown RBP29.5■■■□□ 2.31
CUEDC1-201ENST00000360238 GRB10Q13322 594 aa29.5■■■□□ 2.31
CUEDC1-201ENST00000360238 PDIA5Q14554 519 aa29.5■■■□□ 2.31
CUEDC1-201ENST00000360238 SV2BQ7L1I2 683 aa29.5■■■□□ 2.31
CUEDC1-201ENST00000360238 RABGGTAQ92696 567 aa29.5■■■□□ 2.31
CUEDC1-201ENST00000360238 GOLGA1Q92805 767 aa29.5■■■□□ 2.31
CUEDC1-201ENST00000360238 TUBGCP2Q9BSJ2 902 aa29.5■■■□□ 2.31
CUEDC1-201ENST00000360238 GPCPD1Q9NPB8 672 aa29.5■■■□□ 2.31
CUEDC1-201ENST00000360238 MYH7BA7E2Y1 1941 aa29.5■■■□□ 2.31
CUEDC1-201ENST00000360238 HLA-DOAP06340 250 aa29.5■■■□□ 2.31
CUEDC1-201ENST00000360238 HOXA7P31268 230 aaPredicted RBP29.5■■■□□ 2.31
CUEDC1-201ENST00000360238 ZNF569Q5MCW4 686 aa29.5■■■□□ 2.31
CUEDC1-201ENST00000360238 SLC37A4O43826 429 aa29.49■■■□□ 2.31
CUEDC1-201ENST00000360238 TRIM37O94972 964 aa29.49■■■□□ 2.31
CUEDC1-201ENST00000360238 GABPB1Q06547 395 aaPredicted RBP29.49■■■□□ 2.31
CUEDC1-201ENST00000360238 TMCO3Q6UWJ1 677 aa29.49■■■□□ 2.31
CUEDC1-201ENST00000360238 CLEC10AQ8IUN9 316 aa29.49■■■□□ 2.31
CUEDC1-201ENST00000360238 ADGRF4Q8IZF3 695 aa29.49■■■□□ 2.31
CUEDC1-201ENST00000360238 RETREG2Q8NC44 543 aa29.49■■■□□ 2.31
CUEDC1-201ENST00000360238 EHD4Q9H223 541 aa29.49■■■□□ 2.31
CUEDC1-201ENST00000360238 BLOC1S4Q9NUP1 217 aa29.49■■■□□ 2.31
CUEDC1-201ENST00000360238 TDP2O95551 362 aa29.49■■■□□ 2.31
CUEDC1-201ENST00000360238 ANKRD40Q6AI12 368 aa29.49■■■□□ 2.31
CUEDC1-201ENST00000360238 PPP4R3AQ6IN85 833 aa29.49■■■□□ 2.31
CUEDC1-201ENST00000360238 CDC42EP5Q6NZY7 148 aa29.49■■■□□ 2.31
CUEDC1-201ENST00000360238 TEKT1Q969V4 418 aa29.49■■■□□ 2.31
CUEDC1-201ENST00000360238 NUP58Q9BVL2 599 aa29.49■■■□□ 2.31
CUEDC1-201ENST00000360238 CDC23Q9UJX2 597 aa29.49■■■□□ 2.31
CUEDC1-201ENST00000360238 SIPA1L1O43166 1804 aa29.48■■■□□ 2.31
CUEDC1-201ENST00000360238 PVALEFA0A1B0GWK0 134 aa29.48■■■□□ 2.31
CUEDC1-201ENST00000360238 CTAGE9A4FU28 777 aa29.48■■■□□ 2.31
CUEDC1-201ENST00000360238 EDIL3O43854 480 aa29.48■■■□□ 2.31
CUEDC1-201ENST00000360238 ZRANB2O95218 330 aaKnown RBP eCLIP29.48■■■□□ 2.31
CUEDC1-201ENST00000360238 ARHGAP25P42331 645 aa29.48■■■□□ 2.31
CUEDC1-201ENST00000360238 CLK2P49760 499 aaKnown RBP29.48■■■□□ 2.31
CUEDC1-201ENST00000360238 KRT27Q7Z3Y8 459 aa29.48■■■□□ 2.31
CUEDC1-201ENST00000360238 CNOT6LQ96LI5 555 aaKnown RBP29.48■■■□□ 2.31
CUEDC1-201ENST00000360238 ARFGEF1Q9Y6D6 1849 aa29.47■■■□□ 2.31
CUEDC1-201ENST00000360238 PES1O00541 588 aaKnown RBP29.47■■■□□ 2.31
CUEDC1-201ENST00000360238 NDUFA10O95299 355 aa29.47■■■□□ 2.31
CUEDC1-201ENST00000360238 FCER1AP12319 257 aa29.47■■■□□ 2.31
CUEDC1-201ENST00000360238 ALDH1B1P30837 517 aa29.47■■■□□ 2.31
CUEDC1-201ENST00000360238 NLGN1Q8N2Q7 840 aa29.47■■■□□ 2.31
CUEDC1-201ENST00000360238 KIAA0895Q8NCT3 520 aa29.47■■■□□ 2.31
CUEDC1-201ENST00000360238 LARP4BQ92615 738 aaKnown RBP29.47■■■□□ 2.31
CUEDC1-201ENST00000360238 CDK5RAP3Q96JB5 506 aa29.47■■■□□ 2.31
CUEDC1-201ENST00000360238 PNMA5Q96PV4 448 aa29.47■■■□□ 2.31
CUEDC1-201ENST00000360238 FHOD1Q9Y613 1164 aa29.47■■■□□ 2.31
CUEDC1-201ENST00000360238 EPN1Q9Y6I3 576 aaPredicted RBP29.47■■■□□ 2.31
CUEDC1-201ENST00000360238 EP400Q96L91 3159 aa29.47■■■□□ 2.31
CUEDC1-201ENST00000360238 B4DLN1 442 aa29.47■■■□□ 2.31
CUEDC1-201ENST00000360238 TEX35Q5T0J7 233 aa29.47■■■□□ 2.31
CUEDC1-201ENST00000360238 UNC13DQ70J99 1090 aa29.47■■■□□ 2.31
CUEDC1-201ENST00000360238 TTYH3Q9C0H2 523 aa29.47■■■□□ 2.31
CUEDC1-201ENST00000360238 TSR1Q2NL82 804 aaKnown RBP29.46■■■□□ 2.31
CUEDC1-201ENST00000360238 SRGAP1Q7Z6B7 1085 aa29.46■■■□□ 2.31
CUEDC1-201ENST00000360238 CEP112Q8N8E3 955 aa29.46■■■□□ 2.31
CUEDC1-201ENST00000360238 CUL5Q93034 780 aa29.46■■■□□ 2.31
CUEDC1-201ENST00000360238 MTMR8Q96EF0 704 aa29.46■■■□□ 2.31
CUEDC1-201ENST00000360238 SLF1Q9BQI6 1058 aa29.46■■■□□ 2.31
CUEDC1-201ENST00000360238 PPP1R11O60927 126 aaPredicted RBP29.46■■■□□ 2.31
CUEDC1-201ENST00000360238 TNNI2P48788 182 aa29.46■■■□□ 2.31
CUEDC1-201ENST00000360238 SCNN1DP51172 638 aa29.46■■■□□ 2.31
CUEDC1-201ENST00000360238 APOBEC3HQ6NTF7 200 aaKnown RBP29.46■■■□□ 2.31
CUEDC1-201ENST00000360238 ZSCAN29Q8IWY8 852 aaPredicted RBP29.46■■■□□ 2.31
CUEDC1-201ENST00000360238 SLC35F6Q8N357 371 aa29.46■■■□□ 2.31
CUEDC1-201ENST00000360238 CCDC17Q96LX7 622 aa29.46■■■□□ 2.31
CUEDC1-201ENST00000360238 CHP1Q99653 195 aa29.46■■■□□ 2.31
CUEDC1-201ENST00000360238 QTRT2Q9H974 415 aaKnown RBP29.46■■■□□ 2.31
CUEDC1-201ENST00000360238 ZBTB5O15062 677 aa29.45■■■□□ 2.31
CUEDC1-201ENST00000360238 MEA1Q16626 185 aa29.45■■■□□ 2.31
CUEDC1-201ENST00000360238 PROM2Q8N271 834 aa29.45■■■□□ 2.31
CUEDC1-201ENST00000360238 MXD3Q9BW11 206 aa29.45■■■□□ 2.31
CUEDC1-201ENST00000360238 LRRC27Q9C0I9 530 aa29.45■■■□□ 2.31
CUEDC1-201ENST00000360238 DOK7Q18PE1 504 aa29.45■■■□□ 2.3
CUEDC1-201ENST00000360238 KRT79Q5XKE5 535 aa29.45■■■□□ 2.3
CUEDC1-201ENST00000360238 CENPPQ6IPU0 288 aa29.45■■■□□ 2.3
CUEDC1-201ENST00000360238 NAPGQ99747 312 aaPredicted RBP29.45■■■□□ 2.3
CUEDC1-201ENST00000360238 MYMKA6NI61 221 aa29.44■■■□□ 2.3
CUEDC1-201ENST00000360238 ATP8B1O43520 1251 aa29.44■■■□□ 2.3
CUEDC1-201ENST00000360238 PNMA6AP0CW24 399 aaPredicted RBP29.44■■■□□ 2.3
CUEDC1-201ENST00000360238 MRPL12P52815 198 aaKnown RBP29.44■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms