RNA–Protein interactions for RNA: ENST00000359526.8

DNMT1-202, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene DNMT1, Length 5,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-202ENST00000359526 BBOF1Q8ND07 529 aa13.4□□□□□ -0.26
DNMT1-202ENST00000359526 U2AF1L4Q8WU68 220 aaKnown RBP13.4□□□□□ -0.26
DNMT1-202ENST00000359526 TNKSO95271 1327 aa13.4□□□□□ -0.26
DNMT1-202ENST00000359526 COL15A1P39059 1388 aa13.4□□□□□ -0.26
DNMT1-202ENST00000359526 TROVE2P10155 538 aaKnown RBP eCLIP13.4□□□□□ -0.26
DNMT1-202ENST00000359526 RNF10Q8N5U6 811 aaKnown RBP13.4□□□□□ -0.26
DNMT1-202ENST00000359526 ARHGEF2Q92974 986 aaKnown RBP13.4□□□□□ -0.26
DNMT1-202ENST00000359526 SPATS2LQ9NUQ6 558 aaKnown RBP13.4□□□□□ -0.26
DNMT1-202ENST00000359526 TYW1Q9NV66 732 aaKnown RBP13.4□□□□□ -0.26
DNMT1-202ENST00000359526 TBC1D7Q9P0N9 293 aa13.4□□□□□ -0.26
DNMT1-202ENST00000359526 ARMCX3Q9UH62 379 aaPredicted RBP13.4□□□□□ -0.26
DNMT1-202ENST00000359526 FDX1P10109 184 aa13.4□□□□□ -0.26
DNMT1-202ENST00000359526 USH1CQ9Y6N9 552 aa13.4□□□□□ -0.26
DNMT1-202ENST00000359526 NRKQ7Z2Y5 1582 aa13.4□□□□□ -0.27
DNMT1-202ENST00000359526 KCNK3O14649 394 aa13.39□□□□□ -0.27
DNMT1-202ENST00000359526 STX2P32856 288 aa13.39□□□□□ -0.27
DNMT1-202ENST00000359526 HSPA1LP34931 641 aa13.39□□□□□ -0.27
DNMT1-202ENST00000359526 ARHGAP27Q6ZUM4 889 aa13.39□□□□□ -0.27
DNMT1-202ENST00000359526 GPBP1Q86WP2 473 aa13.39□□□□□ -0.27
DNMT1-202ENST00000359526 RASEFQ8IZ41 740 aa13.39□□□□□ -0.27
DNMT1-202ENST00000359526 RNF26Q9BY78 433 aaPredicted RBP13.39□□□□□ -0.27
DNMT1-202ENST00000359526 KLHL14Q9P2G3 628 aa13.39□□□□□ -0.27
DNMT1-202ENST00000359526 PNMA3Q9UL41 463 aa13.39□□□□□ -0.27
DNMT1-202ENST00000359526 IREB2P48200 963 aaKnown RBP13.39□□□□□ -0.27
DNMT1-202ENST00000359526 SH3BGRP55822 239 aaPredicted RBP13.39□□□□□ -0.27
DNMT1-202ENST00000359526 GTF2IP78347 998 aa13.39□□□□□ -0.27
DNMT1-202ENST00000359526 ANKRD20A3Q5VUR7 823 aa13.39□□□□□ -0.27
DNMT1-202ENST00000359526 PPP1R21Q6ZMI0 780 aa13.39□□□□□ -0.27
DNMT1-202ENST00000359526 FAM160B2Q86V87 743 aa13.39□□□□□ -0.27
DNMT1-202ENST00000359526 NSUN7Q8NE18 718 aaKnown RBP13.39□□□□□ -0.27
DNMT1-202ENST00000359526 DHTKD1Q96HY7 919 aaPredicted RBP13.39□□□□□ -0.27
DNMT1-202ENST00000359526 CDHR1Q96JP9 859 aa13.39□□□□□ -0.27
DNMT1-202ENST00000359526 FMNL1O95466 1100 aaPredicted RBP13.39□□□□□ -0.27
DNMT1-202ENST00000359526 SLC8A1P32418 973 aa13.39□□□□□ -0.27
DNMT1-202ENST00000359526 RBBP5Q15291 538 aaKnown RBP13.39□□□□□ -0.27
DNMT1-202ENST00000359526 FOXP4Q8IVH2 680 aaPredicted RBP13.39□□□□□ -0.27
DNMT1-202ENST00000359526 RNF168Q8IYW5 571 aaPredicted RBP13.39□□□□□ -0.27
DNMT1-202ENST00000359526 PPANQ9NQ55 473 aaKnown RBP13.39□□□□□ -0.27
DNMT1-202ENST00000359526 PKD2L1Q9P0L9 805 aa13.39□□□□□ -0.27
DNMT1-202ENST00000359526 BTBD18B2RXH4 712 aa13.39□□□□□ -0.27
DNMT1-202ENST00000359526 USP17L12C9JPN9 530 aa13.39□□□□□ -0.27
DNMT1-202ENST00000359526 USP17L21D6R901 530 aa13.39□□□□□ -0.27
DNMT1-202ENST00000359526 MYCNP04198 464 aaPredicted RBP13.39□□□□□ -0.27
DNMT1-202ENST00000359526 PHBP35232 272 aa13.39□□□□□ -0.27
DNMT1-202ENST00000359526 TGFBRAP1Q8WUH2 860 aa13.39□□□□□ -0.27
DNMT1-202ENST00000359526 PIGBQ92521 554 aa13.39□□□□□ -0.27
DNMT1-202ENST00000359526 CCT6BQ92526 530 aa13.39□□□□□ -0.27
DNMT1-202ENST00000359526 PEX19P40855 299 aa13.38□□□□□ -0.27
DNMT1-202ENST00000359526 IRX4P78413 519 aa13.38□□□□□ -0.27
DNMT1-202ENST00000359526 TRIM28Q13263 835 aaKnown RBP13.38□□□□□ -0.27
DNMT1-202ENST00000359526 SDCCAG8Q86SQ7 713 aaPredicted RBP13.38□□□□□ -0.27
DNMT1-202ENST00000359526 SYMPKQ92797 1274 aaKnown RBP13.38□□□□□ -0.27
DNMT1-202ENST00000359526 AK8Q96MA6 479 aa13.38□□□□□ -0.27
DNMT1-202ENST00000359526 TACO1Q9BSH4 297 aaKnown RBP13.38□□□□□ -0.27
DNMT1-202ENST00000359526 RNF14Q9UBS8 474 aa13.38□□□□□ -0.27
DNMT1-202ENST00000359526 BIN2Q9UBW5 565 aaPredicted RBP13.38□□□□□ -0.27
DNMT1-202ENST00000359526 MROH2AA6NES4 1674 aa13.38□□□□□ -0.27
DNMT1-202ENST00000359526 FAM47AQ5JRC9 791 aa13.38□□□□□ -0.27
DNMT1-202ENST00000359526 MAPKAPK5Q8IW41 473 aa13.38□□□□□ -0.27
DNMT1-202ENST00000359526 EFCAB13Q8IY85 973 aa13.38□□□□□ -0.27
DNMT1-202ENST00000359526 PANK4Q9NVE7 773 aa13.38□□□□□ -0.27
DNMT1-202ENST00000359526 PCDHA5Q9Y5H7 936 aa13.38□□□□□ -0.27
DNMT1-202ENST00000359526 NOP56O00567 594 aaKnown RBP13.38□□□□□ -0.27
DNMT1-202ENST00000359526 H2AFZP0C0S5 128 aa13.38□□□□□ -0.27
DNMT1-202ENST00000359526 ODR4Q5SWX8 454 aa13.38□□□□□ -0.27
DNMT1-202ENST00000359526 MAP3K21Q5TCX8 1036 aa13.38□□□□□ -0.27
DNMT1-202ENST00000359526 H2AFVQ71UI9 128 aa13.38□□□□□ -0.27
DNMT1-202ENST00000359526 FAM114A2Q9NRY5 505 aa13.38□□□□□ -0.27
DNMT1-202ENST00000359526 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.38□□□□□ -0.27
DNMT1-202ENST00000359526 H7C1W4 665 aa13.38□□□□□ -0.27
DNMT1-202ENST00000359526 DTNBO60941 627 aa13.38□□□□□ -0.27
DNMT1-202ENST00000359526 RCAN1P53805 252 aa13.38□□□□□ -0.27
DNMT1-202ENST00000359526 ADCK5Q3MIX3 580 aa13.38□□□□□ -0.27
DNMT1-202ENST00000359526 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.37□□□□□ -0.27
DNMT1-202ENST00000359526 GUCY2FP51841 1108 aa13.37□□□□□ -0.27
DNMT1-202ENST00000359526 CIAPIN1Q6FI81 312 aa13.37□□□□□ -0.27
DNMT1-202ENST00000359526 CCDC117Q8IWD4 279 aaPredicted RBP13.37□□□□□ -0.27
DNMT1-202ENST00000359526 CCDC89Q8N998 374 aa13.37□□□□□ -0.27
DNMT1-202ENST00000359526 ATP2A3Q93084 1043 aa13.37□□□□□ -0.27
DNMT1-202ENST00000359526 ZBTB1Q9Y2K1 713 aa13.37□□□□□ -0.27
DNMT1-202ENST00000359526 RIPOR2Q9Y4F9 1068 aa13.37□□□□□ -0.27
DNMT1-202ENST00000359526 USP17L3A6NCW0 530 aa13.37□□□□□ -0.27
DNMT1-202ENST00000359526 USP17L4A6NCW7 530 aa13.37□□□□□ -0.27
DNMT1-202ENST00000359526 LPXNO60711 386 aa13.37□□□□□ -0.27
DNMT1-202ENST00000359526 SF3A3Q12874 501 aaKnown RBP eCLIP13.37□□□□□ -0.273e-6■■■■■ 28.3
DNMT1-202ENST00000359526 CERKLQ49MI3 558 aaPredicted RBP13.37□□□□□ -0.27
DNMT1-202ENST00000359526 USP17L1Q7RTZ2 530 aa13.37□□□□□ -0.27
DNMT1-202ENST00000359526 PNMA1Q8ND90 353 aa13.37□□□□□ -0.27
DNMT1-202ENST00000359526 CLIC6Q96NY7 704 aa13.37□□□□□ -0.27
DNMT1-202ENST00000359526 RIC8AQ9NPQ8 531 aa13.37□□□□□ -0.27
DNMT1-202ENST00000359526 ASAP1Q9ULH1 1129 aa13.37□□□□□ -0.27
DNMT1-202ENST00000359526 PCDHA12Q9UN75 941 aa13.37□□□□□ -0.27
DNMT1-202ENST00000359526 BTDP43251 543 aa13.37□□□□□ -0.27
DNMT1-202ENST00000359526 SP4Q02446 784 aa13.37□□□□□ -0.27
DNMT1-202ENST00000359526 TTLL7Q6ZT98 887 aa13.37□□□□□ -0.27
DNMT1-202ENST00000359526 APOBEC3FQ8IUX4 373 aaKnown RBP13.37□□□□□ -0.27
DNMT1-202ENST00000359526 PDE11AQ9HCR9 933 aa13.37□□□□□ -0.27
DNMT1-202ENST00000359526 COL4A3BPQ9Y5P4 624 aa13.37□□□□□ -0.27
DNMT1-202ENST00000359526 hCG_1642624A0A1W2PR95 340 aa13.37□□□□□ -0.27
DNMT1-202ENST00000359526 CASQ2O14958 399 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms