RNA–Protein interactions for RNA: ENST00000359429.10

RPE-202, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPE, Length 2,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-202ENST00000359429 C2CD5Q86YS7 1000 aa12.12□□□□□ -0.47
RPE-202ENST00000359429 ANKRD18AQ8IVF6 992 aa12.12□□□□□ -0.47
RPE-202ENST00000359429 ZSCAN29Q8IWY8 852 aaPredicted RBP12.12□□□□□ -0.47
RPE-202ENST00000359429 TRIM58Q8NG06 486 aa12.12□□□□□ -0.47
RPE-202ENST00000359429 ERGIC2Q96RQ1 377 aa12.12□□□□□ -0.47
RPE-202ENST00000359429 IFIH1Q9BYX4 1025 aaKnown RBP12.12□□□□□ -0.47
RPE-202ENST00000359429 TRIM9Q9C026 710 aa12.12□□□□□ -0.47
RPE-202ENST00000359429 CCSER1Q9C0I3 900 aa12.12□□□□□ -0.47
RPE-202ENST00000359429 DCP1AQ9NPI6 582 aaPredicted RBP12.12□□□□□ -0.47
RPE-202ENST00000359429 MYH13Q9UKX3 1938 aa12.12□□□□□ -0.47
RPE-202ENST00000359429 PCDHA6Q9UN73 950 aa12.12□□□□□ -0.47
RPE-202ENST00000359429 PCDHA8Q9Y5H6 950 aa12.12□□□□□ -0.47
RPE-202ENST00000359429 ERCC3P19447 782 aa12.12□□□□□ -0.47
RPE-202ENST00000359429 GUCY2CP25092 1073 aa12.12□□□□□ -0.47
RPE-202ENST00000359429 CDK17Q00537 523 aa12.12□□□□□ -0.47
RPE-202ENST00000359429 SPA17Q15506 151 aa12.12□□□□□ -0.47
RPE-202ENST00000359429 SH2D3CQ8N5H7 860 aa12.12□□□□□ -0.47
RPE-202ENST00000359429 SEMA6BQ9H3T3 888 aa12.12□□□□□ -0.47
RPE-202ENST00000359429 FAM207AQ9NSI2 230 aaPredicted RBP12.12□□□□□ -0.47
RPE-202ENST00000359429 PLAGL2Q9UPG8 496 aa12.12□□□□□ -0.47
RPE-202ENST00000359429 ANKRD36CQ5JPF3 1778 aa12.11□□□□□ -0.47
RPE-202ENST00000359429 BCL9O00512 1426 aa12.11□□□□□ -0.47
RPE-202ENST00000359429 CCDC194A0A1B0GVG4 234 aa12.11□□□□□ -0.47
RPE-202ENST00000359429 EBAG9O00559 213 aa12.11□□□□□ -0.47
RPE-202ENST00000359429 ORC4O43929 436 aa12.11□□□□□ -0.47
RPE-202ENST00000359429 EIF4A3P38919 411 aaKnown RBP12.11□□□□□ -0.47
RPE-202ENST00000359429 KIF11P52732 1056 aa12.11□□□□□ -0.47
RPE-202ENST00000359429 ATP2B2Q01814 1243 aa12.11□□□□□ -0.47
RPE-202ENST00000359429 TXNRD1Q16881 649 aa12.11□□□□□ -0.47
RPE-202ENST00000359429 KIAA0895Q8NCT3 520 aa12.11□□□□□ -0.47
RPE-202ENST00000359429 NOC3LQ8WTT2 800 aaKnown RBP12.11□□□□□ -0.47
RPE-202ENST00000359429 MS4A14Q96JA4 679 aa12.11□□□□□ -0.47
RPE-202ENST00000359429 CACNA1SQ13698 1873 aa12.11□□□□□ -0.47
RPE-202ENST00000359429 A0A1W2PQJ5 194 aa12.11□□□□□ -0.47
RPE-202ENST00000359429 ZSCAN5CA6NGD5 496 aaPredicted RBP12.11□□□□□ -0.47
RPE-202ENST00000359429 TACC1O75410 805 aa12.11□□□□□ -0.47
RPE-202ENST00000359429 ERLIN2O94905 339 aa12.11□□□□□ -0.47
RPE-202ENST00000359429 CALML3P27482 149 aa12.11□□□□□ -0.47
RPE-202ENST00000359429 PDCLQ13371 301 aa12.11□□□□□ -0.47
RPE-202ENST00000359429 FBXW10Q5XX13 1052 aa12.11□□□□□ -0.47
RPE-202ENST00000359429 KCTD16Q68DU8 428 aa12.11□□□□□ -0.47
RPE-202ENST00000359429 IQCEQ6IPM2 695 aa12.11□□□□□ -0.47
RPE-202ENST00000359429 IL17RBQ9NRM6 502 aa12.11□□□□□ -0.47
RPE-202ENST00000359429 RBM12Q9NTZ6 932 aaKnown RBP12.11□□□□□ -0.47
RPE-202ENST00000359429 SIK3Q9Y2K2 1263 aa12.11□□□□□ -0.47
RPE-202ENST00000359429 TSPY2A6NKD2 308 aa12.1□□□□□ -0.47
RPE-202ENST00000359429 CYTH3O43739 400 aa12.1□□□□□ -0.47
RPE-202ENST00000359429 KRT14P02533 472 aa12.1□□□□□ -0.47
RPE-202ENST00000359429 KLRK1P26718 216 aa12.1□□□□□ -0.47
RPE-202ENST00000359429 HNRNPH3P31942 346 aaKnown RBP12.1□□□□□ -0.47
RPE-202ENST00000359429 FIGNQ5HY92 759 aa12.1□□□□□ -0.47
RPE-202ENST00000359429 C3orf67Q6ZVT6 689 aa12.1□□□□□ -0.47
RPE-202ENST00000359429 NSUN4Q96CB9 384 aaKnown RBP12.1□□□□□ -0.47
RPE-202ENST00000359429 ZIM3Q96PE6 472 aa12.1□□□□□ -0.47
RPE-202ENST00000359429 TLR10Q9BXR5 811 aa12.1□□□□□ -0.47
RPE-202ENST00000359429 TSGA10Q9BZW7 698 aa12.1□□□□□ -0.47
RPE-202ENST00000359429 MTMR7Q9Y216 660 aa12.1□□□□□ -0.47
RPE-202ENST00000359429 GOLGA8KD6RF30 607 aa12.1□□□□□ -0.47
RPE-202ENST00000359429 NTSR2O95665 410 aa12.1□□□□□ -0.47
RPE-202ENST00000359429 FAM153BP0C7A2 387 aa12.1□□□□□ -0.47
RPE-202ENST00000359429 PCP11498 1178 aaKnown RBP12.1□□□□□ -0.47
RPE-202ENST00000359429 PRLRP16471 622 aa12.1□□□□□ -0.47
RPE-202ENST00000359429 ATP1A2P50993 1020 aa12.1□□□□□ -0.47
RPE-202ENST00000359429 ASIC1P78348 528 aa12.1□□□□□ -0.47
RPE-202ENST00000359429 ITIH3Q06033 890 aa12.1□□□□□ -0.47
RPE-202ENST00000359429 FAM153CQ494X1 144 aa12.1□□□□□ -0.47
RPE-202ENST00000359429 CCDC70Q6NSX1 233 aa12.1□□□□□ -0.47
RPE-202ENST00000359429 MMS22LQ6ZRQ5 1243 aa12.1□□□□□ -0.47
RPE-202ENST00000359429 CABP7Q86V35 215 aa12.1□□□□□ -0.47
RPE-202ENST00000359429 MTMR8Q96EF0 704 aa12.1□□□□□ -0.47
RPE-202ENST00000359429 FAM84BQ96KN1 310 aaPredicted RBP12.1□□□□□ -0.47
RPE-202ENST00000359429 SLC39A2Q9NP94 309 aa12.1□□□□□ -0.47
RPE-202ENST00000359429 STIM2Q9P246 746 aa12.1□□□□□ -0.47
RPE-202ENST00000359429 FAM153AQ9UHL3 310 aa12.1□□□□□ -0.47
RPE-202ENST00000359429 ESYT3A0FGR9 886 aa12.09□□□□□ -0.47
RPE-202ENST00000359429 LRRC53A6NM62 1247 aa12.09□□□□□ -0.47
RPE-202ENST00000359429 BUB1O43683 1085 aa12.09□□□□□ -0.47
RPE-202ENST00000359429 USO1O60763 962 aaKnown RBP12.09□□□□□ -0.47
RPE-202ENST00000359429 MYL1P05976 194 aa12.09□□□□□ -0.47
RPE-202ENST00000359429 GLI1P08151 1106 aa12.09□□□□□ -0.47
RPE-202ENST00000359429 EPHB4P54760 987 aa12.09□□□□□ -0.47
RPE-202ENST00000359429 MECOMQ03112 1051 aa12.09□□□□□ -0.47
RPE-202ENST00000359429 INTS5Q6P9B9 1019 aaKnown RBP12.09□□□□□ -0.47
RPE-202ENST00000359429 KCNV1Q6PIU1 500 aa12.09□□□□□ -0.47
RPE-202ENST00000359429 TMC4Q7Z404 712 aa12.09□□□□□ -0.47
RPE-202ENST00000359429 CCDC155Q8N6L0 562 aa12.09□□□□□ -0.47
RPE-202ENST00000359429 CPVLQ9H3G5 476 aa12.09□□□□□ -0.47
RPE-202ENST00000359429 HYOU1Q9Y4L1 999 aa12.09□□□□□ -0.47
RPE-202ENST00000359429 BICDL2A1A5D9 508 aa12.09□□□□□ -0.47
RPE-202ENST00000359429 ZPR1O75312 459 aa12.09□□□□□ -0.47
RPE-202ENST00000359429 USP17L8P0C7I0 530 aa12.09□□□□□ -0.47
RPE-202ENST00000359429 EPB41P11171 864 aaKnown RBP12.09□□□□□ -0.47
RPE-202ENST00000359429 CARSP49589 748 aaKnown RBP12.09□□□□□ -0.47
RPE-202ENST00000359429 IRX3P78415 501 aaPredicted RBP12.09□□□□□ -0.47
RPE-202ENST00000359429 GFPT1Q06210 699 aaPredicted RBP12.09□□□□□ -0.47
RPE-202ENST00000359429 KLHDC7AQ5VTJ3 777 aa12.09□□□□□ -0.47
RPE-202ENST00000359429 HEATR3Q7Z4Q2 680 aa12.09□□□□□ -0.47
RPE-202ENST00000359429 SUGP1Q8IWZ8 645 aaKnown RBP12.09□□□□□ -0.47
RPE-202ENST00000359429 AKR1B10O60218 316 aa12.08□□□□□ -0.48
RPE-202ENST00000359429 CAMTA2O94983 1202 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms