RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 ZNF710Q8N1W2 664 aa20.06■□□□□ 0.8
SHANK1-202ENST00000359082 CCPG1Q9ULG6 757 aa20.06■□□□□ 0.8
SHANK1-202ENST00000359082 PASKQ96RG2 1323 aa20.05■□□□□ 0.8
SHANK1-202ENST00000359082 MX2P20592 715 aa20.05■□□□□ 0.8
SHANK1-202ENST00000359082 ADCY1Q08828 1119 aa20.05■□□□□ 0.8
SHANK1-202ENST00000359082 TMEM232C9JQI7 657 aa20.05■□□□□ 0.8
SHANK1-202ENST00000359082 KIAA0825Q8IV33 1275 aa20.05■□□□□ 0.8
SHANK1-202ENST00000359082 PFKFB2O60825 505 aa20.05■□□□□ 0.8
SHANK1-202ENST00000359082 GUCY2DQ02846 1103 aa20.05■□□□□ 0.8
SHANK1-202ENST00000359082 ICA1Q05084 483 aa20.05■□□□□ 0.8
SHANK1-202ENST00000359082 SNX1Q13596 522 aa20.05■□□□□ 0.8
SHANK1-202ENST00000359082 FAM160B1Q5W0V3 765 aa20.05■□□□□ 0.8
SHANK1-202ENST00000359082 SLC4A1P02730 911 aa20.05■□□□□ 0.8
SHANK1-202ENST00000359082 TMOD1P28289 359 aa20.05■□□□□ 0.8
SHANK1-202ENST00000359082 GOLGA8FQ08AF8 430 aa20.05■□□□□ 0.8
SHANK1-202ENST00000359082 GOLGA8DPQ0D2H9 430 aa20.05■□□□□ 0.8
SHANK1-202ENST00000359082 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.05■□□□□ 0.8
SHANK1-202ENST00000359082 GJA10Q969M2 543 aa20.05■□□□□ 0.8
SHANK1-202ENST00000359082 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.05■□□□□ 0.8
SHANK1-202ENST00000359082 COL4A3BPQ9Y5P4 624 aa20.05■□□□□ 0.8
SHANK1-202ENST00000359082 BRD1O95696 1058 aa20.05■□□□□ 0.8
SHANK1-202ENST00000359082 SETSIPP0DME0 302 aa20.05■□□□□ 0.8
SHANK1-202ENST00000359082 EHHADHQ08426 723 aa20.05■□□□□ 0.8
SHANK1-202ENST00000359082 RCN2Q14257 317 aa20.05■□□□□ 0.8
SHANK1-202ENST00000359082 KIF22Q14807 665 aa20.05■□□□□ 0.8
SHANK1-202ENST00000359082 ZNF496Q96IT1 587 aaPredicted RBP20.05■□□□□ 0.8
SHANK1-202ENST00000359082 CSPG5O95196 566 aa20.04■□□□□ 0.8
SHANK1-202ENST00000359082 CLTAP09496 248 aa20.04■□□□□ 0.8
SHANK1-202ENST00000359082 CXorf38Q8TB03 319 aa20.04■□□□□ 0.8
SHANK1-202ENST00000359082 CDKL2Q92772 493 aa20.04■□□□□ 0.8
SHANK1-202ENST00000359082 CNOT6LQ96LI5 555 aaKnown RBP20.04■□□□□ 0.8
SHANK1-202ENST00000359082 FAN1Q9Y2M0 1017 aa20.04■□□□□ 0.8
SHANK1-202ENST00000359082 COL17A1Q9UMD9 1497 aaPredicted RBP20.04■□□□□ 0.8
SHANK1-202ENST00000359082 FRMD3A2A2Y4 597 aa20.04■□□□□ 0.8
SHANK1-202ENST00000359082 DDAH1O94760 285 aa20.04■□□□□ 0.8
SHANK1-202ENST00000359082 ANGPTL3Q9Y5C1 460 aa20.04■□□□□ 0.8
SHANK1-202ENST00000359082 H0YCG3 227 aa20.04■□□□□ 0.8
SHANK1-202ENST00000359082 LMNB1P20700 586 aa20.04■□□□□ 0.8
SHANK1-202ENST00000359082 STAG1Q8WVM7 1258 aa20.04■□□□□ 0.8
SHANK1-202ENST00000359082 NOC2LQ9Y3T9 749 aaKnown RBP20.04■□□□□ 0.8
SHANK1-202ENST00000359082 HSPD1P10809 573 aaKnown RBP20.04■□□□□ 0.8
SHANK1-202ENST00000359082 SLC12A1Q13621 1099 aa20.04■□□□□ 0.8
SHANK1-202ENST00000359082 TNFAIP1Q13829 316 aa20.04■□□□□ 0.8
SHANK1-202ENST00000359082 KCTD16Q68DU8 428 aa20.04■□□□□ 0.8
SHANK1-202ENST00000359082 PCDHA7Q9UN72 937 aa20.04■□□□□ 0.8
SHANK1-202ENST00000359082 RNF8O76064 485 aa20.04■□□□□ 0.8
SHANK1-202ENST00000359082 MFAP3P55082 362 aa20.04■□□□□ 0.8
SHANK1-202ENST00000359082 RYBPQ8N488 228 aaPredicted RBP20.04■□□□□ 0.8
SHANK1-202ENST00000359082 LIG3P49916 1009 aa20.03■□□□□ 0.8
SHANK1-202ENST00000359082 EXOC3L4Q17RC7 722 aa20.03■□□□□ 0.8
SHANK1-202ENST00000359082 BBOF1Q8ND07 529 aa20.03■□□□□ 0.8
SHANK1-202ENST00000359082 NRBP2Q9NSY0 501 aa20.03■□□□□ 0.8
SHANK1-202ENST00000359082 USP21Q9UK80 565 aa20.03■□□□□ 0.8
SHANK1-202ENST00000359082 KIAA1024Q9UPX6 916 aa20.03■□□□□ 0.8
SHANK1-202ENST00000359082 RTEL1Q9NZ71 1219 aa20.03■□□□□ 0.8
SHANK1-202ENST00000359082 ANKRD13CQ8N6S4 541 aa20.03■□□□□ 0.8
SHANK1-202ENST00000359082 ATP7AQ04656 1500 aa20.03■□□□□ 0.8
SHANK1-202ENST00000359082 EFCAB8A8MWE9 144 aa20.03■□□□□ 0.8
SHANK1-202ENST00000359082 INHBAP08476 426 aa20.03■□□□□ 0.8
SHANK1-202ENST00000359082 GOLGA8CPA6NN73 597 aa20.03■□□□□ 0.8
SHANK1-202ENST00000359082 TTC4O95801 387 aa20.03■□□□□ 0.8
SHANK1-202ENST00000359082 ASPHQ12797 758 aa20.03■□□□□ 0.8
SHANK1-202ENST00000359082 PTGDRQ13258 359 aa20.03■□□□□ 0.8
SHANK1-202ENST00000359082 PPP2R5EQ16537 467 aa20.03■□□□□ 0.8
SHANK1-202ENST00000359082 LRRC24Q50LG9 513 aa20.03■□□□□ 0.8
SHANK1-202ENST00000359082 MCTP2Q6DN12 878 aa20.03■□□□□ 0.8
SHANK1-202ENST00000359082 EEF2KMTQ96G04 330 aa20.03■□□□□ 0.8
SHANK1-202ENST00000359082 RPS6KC1Q96S38 1066 aa20.03■□□□□ 0.8
SHANK1-202ENST00000359082 FIS1Q9Y3D6 152 aa20.03■□□□□ 0.8
SHANK1-202ENST00000359082 SART1O43290 800 aaKnown RBP20.02■□□□□ 0.8
SHANK1-202ENST00000359082 PDE6AP16499 860 aa20.02■□□□□ 0.8
SHANK1-202ENST00000359082 CMA1P23946 247 aa20.02■□□□□ 0.8
SHANK1-202ENST00000359082 POLR2BP30876 1174 aaKnown RBP20.02■□□□□ 0.8
SHANK1-202ENST00000359082 COPB1P53618 953 aaKnown RBP20.02■□□□□ 0.8
SHANK1-202ENST00000359082 MIS12Q9H081 205 aa20.02■□□□□ 0.8
SHANK1-202ENST00000359082 AKT3Q9Y243 479 aa20.02■□□□□ 0.8
SHANK1-202ENST00000359082 ARHGEF10O15013 1369 aa20.02■□□□□ 0.8
SHANK1-202ENST00000359082 ENC1O14682 589 aa20.02■□□□□ 0.8
SHANK1-202ENST00000359082 SPATA1Q5VX52 437 aa20.02■□□□□ 0.8
SHANK1-202ENST00000359082 GSPT1P15170 499 aaKnown RBP20.02■□□□□ 0.8
SHANK1-202ENST00000359082 SLFN13Q68D06 897 aa20.02■□□□□ 0.8
SHANK1-202ENST00000359082 BCAS4Q8TDM0 211 aa20.02■□□□□ 0.8
SHANK1-202ENST00000359082 PBRM1Q86U86 1689 aa20.02■□□□□ 0.8
SHANK1-202ENST00000359082 BTBD18B2RXH4 712 aa20.02■□□□□ 0.8
SHANK1-202ENST00000359082 H2AFZP0C0S5 128 aa20.02■□□□□ 0.8
SHANK1-202ENST00000359082 H2AFVQ71UI9 128 aa20.02■□□□□ 0.8
SHANK1-202ENST00000359082 RAB44Q7Z6P3 723 aaPredicted RBP20.02■□□□□ 0.8
SHANK1-202ENST00000359082 PARD3BQ8TEW8 1205 aa20.02■□□□□ 0.8
SHANK1-202ENST00000359082 TM6SF1Q9BZW5 370 aa20.02■□□□□ 0.8
SHANK1-202ENST00000359082 IFT122Q9HBG6 1241 aa20.02■□□□□ 0.8
SHANK1-202ENST00000359082 ATP2B4P23634 1241 aa20.02■□□□□ 0.79
SHANK1-202ENST00000359082 GCKP35557 465 aa20.02■□□□□ 0.79
SHANK1-202ENST00000359082 PDE1BQ01064 536 aa20.02■□□□□ 0.79
SHANK1-202ENST00000359082 CHRNDQ07001 517 aa20.02■□□□□ 0.79
SHANK1-202ENST00000359082 PTPN21Q16825 1174 aa20.02■□□□□ 0.79
SHANK1-202ENST00000359082 TCP1P17987 556 aaKnown RBP20.01■□□□□ 0.79
SHANK1-202ENST00000359082 EEF1GP26641 437 aaKnown RBP20.01■□□□□ 0.79
SHANK1-202ENST00000359082 PDE11AQ9HCR9 933 aa20.01■□□□□ 0.79
SHANK1-202ENST00000359082 ANKRD36BP1Q96IX9 119 aa20.01■□□□□ 0.79
SHANK1-202ENST00000359082 METTL14Q9HCE5 456 aaKnown RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms