RNA–Protein interactions for RNA: ENST00000358808.6

CLIP1-202, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLIP1, Length 5,880 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-202ENST00000358808 GOLGA8NF8WBI6 632 aa11.11□□□□□ -0.63
CLIP1-202ENST00000358808 THAP12O43422 761 aa11.11□□□□□ -0.63
CLIP1-202ENST00000358808 RLBP1P12271 317 aa11.11□□□□□ -0.63
CLIP1-202ENST00000358808 GUCY2FP51841 1108 aa11.11□□□□□ -0.63
CLIP1-202ENST00000358808 TUBB8Q3ZCM7 444 aa11.11□□□□□ -0.63
CLIP1-202ENST00000358808 ANKRD20A4Q4UJ75 823 aa11.11□□□□□ -0.63
CLIP1-202ENST00000358808 ANKRD20A8PQ5CZ79 823 aa11.11□□□□□ -0.63
CLIP1-202ENST00000358808 ANKRD20A2Q5SQ80 823 aa11.11□□□□□ -0.63
CLIP1-202ENST00000358808 ANKRD20A1Q5TYW2 823 aa11.11□□□□□ -0.63
CLIP1-202ENST00000358808 CEP85Q6P2H3 762 aa11.11□□□□□ -0.63
CLIP1-202ENST00000358808 MAP3K4Q9Y6R4 1608 aa11.11□□□□□ -0.63
CLIP1-202ENST00000358808 WDR64B1ANS9 1081 aa11.11□□□□□ -0.63
CLIP1-202ENST00000358808 ANXA13P27216 316 aa11.11□□□□□ -0.63
CLIP1-202ENST00000358808 DIS3L2Q8IYB7 885 aaKnown RBP11.11□□□□□ -0.63
CLIP1-202ENST00000358808 RNF168Q8IYW5 571 aaPredicted RBP11.11□□□□□ -0.63
CLIP1-202ENST00000358808 TRPC5Q9UL62 973 aaPredicted RBP11.11□□□□□ -0.63
CLIP1-202ENST00000358808 THRAP3Q9Y2W1 955 aaKnown RBP11.11□□□□□ -0.63
CLIP1-202ENST00000358808 FRMPD2Q68DX3 1309 aaPredicted RBP11.11□□□□□ -0.63
CLIP1-202ENST00000358808 MYOM2P54296 1465 aa11.11□□□□□ -0.63
CLIP1-202ENST00000358808 CUTAO60888 179 aa11.11□□□□□ -0.63
CLIP1-202ENST00000358808 XRCC5P13010 732 aaKnown RBP11.11□□□□□ -0.63
CLIP1-202ENST00000358808 ATF2P15336 505 aa11.11□□□□□ -0.63
CLIP1-202ENST00000358808 OSBPP22059 807 aa11.11□□□□□ -0.63
CLIP1-202ENST00000358808 ELF1P32519 619 aa11.11□□□□□ -0.63
CLIP1-202ENST00000358808 CTNNA1P35221 906 aaKnown RBP11.11□□□□□ -0.63
CLIP1-202ENST00000358808 SKIV2LQ15477 1246 aaKnown RBP11.11□□□□□ -0.63
CLIP1-202ENST00000358808 TSPYL6Q8N831 410 aa11.11□□□□□ -0.63
CLIP1-202ENST00000358808 ZNF594Q96JF6 807 aaPredicted RBP11.11□□□□□ -0.63
CLIP1-202ENST00000358808 SLITRK6Q9H5Y7 841 aa11.11□□□□□ -0.63
CLIP1-202ENST00000358808 SUDS3Q9H7L9 328 aaPredicted RBP11.11□□□□□ -0.63
CLIP1-202ENST00000358808 MRPL11Q9Y3B7 192 aaKnown RBP11.11□□□□□ -0.63
CLIP1-202ENST00000358808 MAP3K7O43318 606 aa11.11□□□□□ -0.63
CLIP1-202ENST00000358808 N4BP1O75113 896 aaKnown RBP11.11□□□□□ -0.63
CLIP1-202ENST00000358808 TTLL7Q6ZT98 887 aa11.11□□□□□ -0.63
CLIP1-202ENST00000358808 MCF2L2Q86YR7 1114 aa11.11□□□□□ -0.63
CLIP1-202ENST00000358808 MYL10Q9BUA6 226 aa11.11□□□□□ -0.63
CLIP1-202ENST00000358808 POLIQ9UNA4 740 aa11.11□□□□□ -0.63
CLIP1-202ENST00000358808 F8W8V4 182 aa11.1□□□□□ -0.63
CLIP1-202ENST00000358808 RXRBP28702 533 aa11.1□□□□□ -0.63
CLIP1-202ENST00000358808 ARHGDIAP52565 204 aa11.1□□□□□ -0.63
CLIP1-202ENST00000358808 FANCCQ00597 558 aa11.1□□□□□ -0.63
CLIP1-202ENST00000358808 THOC5Q13769 683 aaKnown RBP11.1□□□□□ -0.63
CLIP1-202ENST00000358808 KCTD2Q14681 263 aa11.1□□□□□ -0.63
CLIP1-202ENST00000358808 PTPROQ16827 1216 aa11.1□□□□□ -0.63
CLIP1-202ENST00000358808 WHAMMP3Q1A5X7 153 aa11.1□□□□□ -0.63
CLIP1-202ENST00000358808 DNAJC10Q8IXB1 793 aa11.1□□□□□ -0.63
CLIP1-202ENST00000358808 REXO1Q8N1G1 1221 aaKnown RBP11.1□□□□□ -0.63
CLIP1-202ENST00000358808 CEP19Q96LK0 163 aa11.1□□□□□ -0.63
CLIP1-202ENST00000358808 TEKT3Q9BXF9 490 aa11.1□□□□□ -0.63
CLIP1-202ENST00000358808 ATP8B3O60423 1300 aa11.1□□□□□ -0.63
CLIP1-202ENST00000358808 MROH5Q6ZUA9 1318 aa11.1□□□□□ -0.63
CLIP1-202ENST00000358808 M0R2C6 588 aa11.1□□□□□ -0.63
CLIP1-202ENST00000358808 TIMM10P62072 90 aa11.1□□□□□ -0.63
CLIP1-202ENST00000358808 FAM47AQ5JRC9 791 aa11.1□□□□□ -0.63
CLIP1-202ENST00000358808 FAM186BQ8IYM0 893 aa11.1□□□□□ -0.63
CLIP1-202ENST00000358808 CCDC138Q96M89 665 aa11.1□□□□□ -0.63
CLIP1-202ENST00000358808 SLF1Q9BQI6 1058 aa11.1□□□□□ -0.63
CLIP1-202ENST00000358808 IFIH1Q9BYX4 1025 aaKnown RBP11.1□□□□□ -0.63
CLIP1-202ENST00000358808 IQGAP3Q86VI3 1631 aa11.1□□□□□ -0.63
CLIP1-202ENST00000358808 SYNDIG1LA6NDD5 238 aa11.1□□□□□ -0.63
CLIP1-202ENST00000358808 ESRRBO95718 433 aa11.1□□□□□ -0.63
CLIP1-202ENST00000358808 GTF2IP78347 998 aa11.1□□□□□ -0.63
CLIP1-202ENST00000358808 TMTC1Q8IUR5 882 aa11.1□□□□□ -0.63
CLIP1-202ENST00000358808 FBXL13Q8NEE6 735 aa11.1□□□□□ -0.63
CLIP1-202ENST00000358808 PHACTR3Q96KR7 559 aa11.1□□□□□ -0.63
CLIP1-202ENST00000358808 SLC38A10Q9HBR0 1119 aa11.1□□□□□ -0.63
CLIP1-202ENST00000358808 ABT1Q9ULW3 272 aaKnown RBP11.1□□□□□ -0.63
CLIP1-202ENST00000358808 SUGT1Q9Y2Z0 365 aa11.1□□□□□ -0.63
CLIP1-202ENST00000358808 ACTN1P12814 892 aa11.1□□□□□ -0.63
CLIP1-202ENST00000358808 CCNA1P78396 465 aa11.1□□□□□ -0.63
CLIP1-202ENST00000358808 TNNI3KQ59H18 835 aa11.1□□□□□ -0.63
CLIP1-202ENST00000358808 CDC37L1Q7L3B6 337 aa11.1□□□□□ -0.63
CLIP1-202ENST00000358808 TBC1D22AQ8WUA7 517 aa11.1□□□□□ -0.63
CLIP1-202ENST00000358808 PPWD1Q96BP3 646 aaKnown RBP11.1□□□□□ -0.63
CLIP1-202ENST00000358808 EIF2AQ9BY44 585 aaKnown RBP11.1□□□□□ -0.63
CLIP1-202ENST00000358808 IFT122Q9HBG6 1241 aa11.1□□□□□ -0.63
CLIP1-202ENST00000358808 PPP1R9AQ9ULJ8 1098 aa11.1□□□□□ -0.63
CLIP1-202ENST00000358808 FPGT-TNNI3KV9GXZ4 949 aa11.1□□□□□ -0.63
CLIP1-202ENST00000358808 PRDM15P57071 1507 aaPredicted RBP11.1□□□□□ -0.63
CLIP1-202ENST00000358808 POLR3AO14802 1390 aaPredicted RBP11.09□□□□□ -0.63
CLIP1-202ENST00000358808 SMCO2A6NFE2 343 aa11.09□□□□□ -0.63
CLIP1-202ENST00000358808 KRIT1O00522 736 aa11.09□□□□□ -0.63
CLIP1-202ENST00000358808 ARMCX5Q6P1M9 558 aa11.09□□□□□ -0.63
CLIP1-202ENST00000358808 MAP7D3Q8IWC1 876 aa11.09□□□□□ -0.63
CLIP1-202ENST00000358808 EFCAB13Q8IY85 973 aa11.09□□□□□ -0.63
CLIP1-202ENST00000358808 C17orf53Q8N3J3 647 aaPredicted RBP11.09□□□□□ -0.63
CLIP1-202ENST00000358808 LPIN2Q92539 896 aa11.09□□□□□ -0.63
CLIP1-202ENST00000358808 ZNF653Q96CK0 615 aa11.09□□□□□ -0.63
CLIP1-202ENST00000358808 CARD6Q9BX69 1037 aa11.09□□□□□ -0.63
CLIP1-202ENST00000358808 OGFRQ9NZT2 677 aa11.09□□□□□ -0.63
CLIP1-202ENST00000358808 CROCC2H7BZ55 1655 aa11.09□□□□□ -0.63
CLIP1-202ENST00000358808 TMEM247A6NEH6 219 aa11.09□□□□□ -0.63
CLIP1-202ENST00000358808 KCNK3O14649 394 aa11.09□□□□□ -0.63
CLIP1-202ENST00000358808 RPS6KB1P23443 525 aa11.09□□□□□ -0.63
CLIP1-202ENST00000358808 CCNYQ8ND76 341 aa11.09□□□□□ -0.63
CLIP1-202ENST00000358808 HACD3Q9P035 362 aa11.09□□□□□ -0.63
CLIP1-202ENST00000358808 METP08581 1390 aa11.09□□□□□ -0.63
CLIP1-202ENST00000358808 ZBBXA8MT70 800 aa11.09□□□□□ -0.63
CLIP1-202ENST00000358808 ZNF18P17022 549 aa11.09□□□□□ -0.63
CLIP1-202ENST00000358808 TFAP4Q01664 338 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms