RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 RAB20Q9NX57 234 aa9.54□□□□□ -0.88
COL6A6-201ENST00000358511 PSD3Q9NYI0 1048 aa9.54□□□□□ -0.88
COL6A6-201ENST00000358511 SAMD9Q5K651 1589 aa9.54□□□□□ -0.88
COL6A6-201ENST00000358511 CHL1O00533 1208 aa9.54□□□□□ -0.88
COL6A6-201ENST00000358511 NONOQ15233 471 aaKnown RBP eCLIP9.54□□□□□ -0.88
COL6A6-201ENST00000358511 ZNF449Q6P9G9 518 aa9.54□□□□□ -0.88
COL6A6-201ENST00000358511 TEKT1Q969V4 418 aa9.54□□□□□ -0.88
COL6A6-201ENST00000358511 MYL10Q9BUA6 226 aa9.54□□□□□ -0.88
COL6A6-201ENST00000358511 PACSIN2Q9UNF0 486 aaPredicted RBP9.54□□□□□ -0.88
COL6A6-201ENST00000358511 LONP1P36776 959 aaKnown RBP9.54□□□□□ -0.88
COL6A6-201ENST00000358511 SLC8A3P57103 927 aa9.54□□□□□ -0.88
COL6A6-201ENST00000358511 G2E3Q7L622 706 aa9.54□□□□□ -0.88
COL6A6-201ENST00000358511 OSCARQ8IYS5 282 aa9.54□□□□□ -0.88
COL6A6-201ENST00000358511 FAM212AQ96EL1 285 aa9.54□□□□□ -0.88
COL6A6-201ENST00000358511 PALMDQ9NP74 551 aa9.54□□□□□ -0.88
COL6A6-201ENST00000358511 ZNF518AQ6AHZ1 1483 aa9.54□□□□□ -0.88
COL6A6-201ENST00000358511 INPP1P49441 399 aa9.54□□□□□ -0.88
COL6A6-201ENST00000358511 PLTPP55058 493 aa9.54□□□□□ -0.88
COL6A6-201ENST00000358511 EPN3Q9H201 632 aa9.54□□□□□ -0.88
COL6A6-201ENST00000358511 ARHGAP31Q2M1Z3 1444 aa9.53□□□□□ -0.88
COL6A6-201ENST00000358511 MFAP3LO75121 409 aa9.53□□□□□ -0.88
COL6A6-201ENST00000358511 H2AFZP0C0S5 128 aa9.53□□□□□ -0.88
COL6A6-201ENST00000358511 H2AFVQ71UI9 128 aa9.53□□□□□ -0.88
COL6A6-201ENST00000358511 STAP2Q9UGK3 403 aa9.53□□□□□ -0.88
COL6A6-201ENST00000358511 MEFVO15553 781 aaPredicted RBP9.53□□□□□ -0.88
COL6A6-201ENST00000358511 DR1Q01658 176 aa9.53□□□□□ -0.88
COL6A6-201ENST00000358511 TAF12Q16514 161 aa9.53□□□□□ -0.88
COL6A6-201ENST00000358511 PTPROQ16827 1216 aa9.53□□□□□ -0.88
COL6A6-201ENST00000358511 NLRP14Q86W24 1093 aa9.53□□□□□ -0.88
COL6A6-201ENST00000358511 IQSEC3Q9UPP2 1182 aaPredicted RBP9.53□□□□□ -0.88
COL6A6-201ENST00000358511 ZFXP17010 805 aaPredicted RBP9.53□□□□□ -0.88
COL6A6-201ENST00000358511 KCNJ6P48051 423 aa9.53□□□□□ -0.88
COL6A6-201ENST00000358511 HELBQ8NG08 1087 aaPredicted RBP9.53□□□□□ -0.88
COL6A6-201ENST00000358511 MAGOHBQ96A72 148 aaKnown RBP9.53□□□□□ -0.88
COL6A6-201ENST00000358511 FOXP1Q9H334 677 aaPredicted RBP9.53□□□□□ -0.88
COL6A6-201ENST00000358511 ZCCHC17Q9NP64 241 aaKnown RBP9.53□□□□□ -0.88
COL6A6-201ENST00000358511 NOVA2Q9UNW9 492 aaKnown RBP9.53□□□□□ -0.88
COL6A6-201ENST00000358511 NSFL1CQ9UNZ2 370 aaKnown RBP9.53□□□□□ -0.88
COL6A6-201ENST00000358511 PTPRTO14522 1441 aa9.53□□□□□ -0.88
COL6A6-201ENST00000358511 EXOC1LA0A1B0GW35 172 aa9.53□□□□□ -0.88
COL6A6-201ENST00000358511 GYG2O15488 501 aa9.53□□□□□ -0.88
COL6A6-201ENST00000358511 POLR2FP61218 127 aaKnown RBP9.53□□□□□ -0.88
COL6A6-201ENST00000358511 TMED2Q15363 201 aa9.53□□□□□ -0.88
COL6A6-201ENST00000358511 GRAMD1BQ3KR37 738 aa9.53□□□□□ -0.88
COL6A6-201ENST00000358511 NUGGCQ68CJ6 796 aa9.53□□□□□ -0.88
COL6A6-201ENST00000358511 TTLL7Q6ZT98 887 aa9.53□□□□□ -0.88
COL6A6-201ENST00000358511 DYMQ7RTS9 669 aa9.53□□□□□ -0.88
COL6A6-201ENST00000358511 AP2B1P63010 937 aa9.53□□□□□ -0.88
COL6A6-201ENST00000358511 TRAIPQ9BWF2 469 aa9.53□□□□□ -0.88
COL6A6-201ENST00000358511 IFT122Q9HBG6 1241 aa9.53□□□□□ -0.88
COL6A6-201ENST00000358511 ADCY7P51828 1080 aa9.53□□□□□ -0.88
COL6A6-201ENST00000358511 MYCT1Q8N699 235 aa9.53□□□□□ -0.88
COL6A6-201ENST00000358511 METTL22Q9BUU2 404 aaPredicted RBP9.53□□□□□ -0.88
COL6A6-201ENST00000358511 RCOR1Q9UKL0 485 aa9.53□□□□□ -0.88
COL6A6-201ENST00000358511 EYA2O00167 538 aa9.53□□□□□ -0.88
COL6A6-201ENST00000358511 ECEL1O95672 775 aa9.53□□□□□ -0.88
COL6A6-201ENST00000358511 ESRRAP11474 423 aaPredicted RBP9.53□□□□□ -0.88
COL6A6-201ENST00000358511 PPP2R2AP63151 447 aa9.53□□□□□ -0.88
COL6A6-201ENST00000358511 NR1H3Q13133 447 aa9.53□□□□□ -0.88
COL6A6-201ENST00000358511 IDI1Q13907 227 aa9.53□□□□□ -0.88
COL6A6-201ENST00000358511 PPP4R4Q6NUP7 873 aa9.53□□□□□ -0.88
COL6A6-201ENST00000358511 MAML1Q92585 1016 aa9.53□□□□□ -0.88
COL6A6-201ENST00000358511 ARHGEF10O15013 1369 aa9.53□□□□□ -0.88
COL6A6-201ENST00000358511 POC1B-GALNT4F8VUJ3 575 aa9.52□□□□□ -0.88
COL6A6-201ENST00000358511 H0Y3Z8 333 aa9.52□□□□□ -0.88
COL6A6-201ENST00000358511 RAPGEF3O95398 923 aa9.52□□□□□ -0.88
COL6A6-201ENST00000358511 MAP7D3Q8IWC1 876 aa9.52□□□□□ -0.88
COL6A6-201ENST00000358511 ENOX1Q8TC92 643 aaKnown RBP9.52□□□□□ -0.88
COL6A6-201ENST00000358511 COG1Q8WTW3 980 aa9.52□□□□□ -0.88
COL6A6-201ENST00000358511 PHF8Q9UPP1 1060 aa9.52□□□□□ -0.88
COL6A6-201ENST00000358511 SATB2Q9UPW6 733 aa9.52□□□□□ -0.88
COL6A6-201ENST00000358511 TMEM232C9JQI7 657 aa9.52□□□□□ -0.88
COL6A6-201ENST00000358511 DTNBO60941 627 aa9.52□□□□□ -0.88
COL6A6-201ENST00000358511 CUL3Q13618 768 aa9.52□□□□□ -0.88
COL6A6-201ENST00000358511 PLCB4Q15147 1175 aa9.52□□□□□ -0.88
COL6A6-201ENST00000358511 FBXW10Q5XX13 1052 aa9.52□□□□□ -0.88
COL6A6-201ENST00000358511 ARHGEF35A5YM69 484 aa9.52□□□□□ -0.89
COL6A6-201ENST00000358511 LAD1O00515 517 aa9.52□□□□□ -0.89
COL6A6-201ENST00000358511 MCF2P10911 925 aa9.52□□□□□ -0.89
COL6A6-201ENST00000358511 EEF1B2P24534 225 aaKnown RBP9.52□□□□□ -0.89
COL6A6-201ENST00000358511 KSR1Q8IVT5 923 aa9.52□□□□□ -0.89
COL6A6-201ENST00000358511 HOMEZQ8IX15 550 aa9.52□□□□□ -0.89
COL6A6-201ENST00000358511 SSH3Q8TE77 659 aa9.52□□□□□ -0.89
COL6A6-201ENST00000358511 CLIC6Q96NY7 704 aa9.52□□□□□ -0.89
COL6A6-201ENST00000358511 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.52□□□□□ -0.89
COL6A6-201ENST00000358511 ASPHQ12797 758 aa9.52□□□□□ -0.89
COL6A6-201ENST00000358511 DBNDD2Q9BQY9 259 aa9.52□□□□□ -0.89
COL6A6-201ENST00000358511 MYH3P11055 1940 aa9.52□□□□□ -0.89
COL6A6-201ENST00000358511 ZBED6P86452 979 aa9.52□□□□□ -0.89
COL6A6-201ENST00000358511 ATP6V1G3Q96LB4 118 aa9.52□□□□□ -0.89
COL6A6-201ENST00000358511 METTL14Q9HCE5 456 aaKnown RBP9.52□□□□□ -0.89
COL6A6-201ENST00000358511 ANLNQ9NQW6 1124 aa9.52□□□□□ -0.89
COL6A6-201ENST00000358511 SEMA3EO15041 775 aa9.52□□□□□ -0.89
COL6A6-201ENST00000358511 EP400NLQ6ZTU2 488 aa9.52□□□□□ -0.89
COL6A6-201ENST00000358511 DZIP3Q86Y13 1208 aaKnown RBP9.52□□□□□ -0.89
COL6A6-201ENST00000358511 APLFQ8IW19 511 aaPredicted RBP9.52□□□□□ -0.89
COL6A6-201ENST00000358511 CCDC124Q96CT7 223 aaKnown RBP9.52□□□□□ -0.89
COL6A6-201ENST00000358511 STAMBPL1Q96FJ0 436 aa9.52□□□□□ -0.89
COL6A6-201ENST00000358511 MAN1B1Q9UKM7 699 aa9.52□□□□□ -0.89
COL6A6-201ENST00000358511 NUB1Q9Y5A7 615 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms