RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 GLT8D2Q9H1C3 349 aa17.51■□□□□ 0.39
TPM1-206ENST00000358278 KCNJ14Q9UNX9 436 aa17.51■□□□□ 0.39
TPM1-206ENST00000358278 GCOM1H8Y6P7 765 aaPredicted RBP17.5■□□□□ 0.39
TPM1-206ENST00000358278 POLR2MP0CAP2 368 aa17.5■□□□□ 0.39
TPM1-206ENST00000358278 PTPREP23469 700 aa17.5■□□□□ 0.39
TPM1-206ENST00000358278 CALML3P27482 149 aa17.5■□□□□ 0.39
TPM1-206ENST00000358278 MRPL12P52815 198 aaKnown RBP17.5■□□□□ 0.39
TPM1-206ENST00000358278 RPS6P62753 249 aaKnown RBP17.5■□□□□ 0.39
TPM1-206ENST00000358278 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.5■□□□□ 0.39
TPM1-206ENST00000358278 BICD2Q8TD16 824 aa17.5■□□□□ 0.39
TPM1-206ENST00000358278 SHISA4Q96DD7 197 aa17.5■□□□□ 0.39
TPM1-206ENST00000358278 TRIM47Q96LD4 638 aa17.5■□□□□ 0.39
TPM1-206ENST00000358278 RIC8AQ9NPQ8 531 aa17.5■□□□□ 0.39
TPM1-206ENST00000358278 CYP39A1Q9NYL5 469 aa17.5■□□□□ 0.39
TPM1-206ENST00000358278 HTTP42858 3142 aa17.5■□□□□ 0.39
TPM1-206ENST00000358278 H3BQV1 296 aa17.5■□□□□ 0.39
TPM1-206ENST00000358278 FOXN1O15353 648 aa17.5■□□□□ 0.39
TPM1-206ENST00000358278 PDCP20941 246 aa17.5■□□□□ 0.39
TPM1-206ENST00000358278 ADORA2AP29274 412 aa17.5■□□□□ 0.39
TPM1-206ENST00000358278 CTGFP29279 349 aa17.5■□□□□ 0.39
TPM1-206ENST00000358278 HOXA13P31271 388 aaPredicted RBP17.5■□□□□ 0.39
TPM1-206ENST00000358278 GUCY1B3Q02153 619 aa17.5■□□□□ 0.39
TPM1-206ENST00000358278 BAATQ14032 418 aaPredicted RBP17.5■□□□□ 0.39
TPM1-206ENST00000358278 ARHGEF6Q15052 776 aa17.5■□□□□ 0.39
TPM1-206ENST00000358278 IFFO2Q5TF58 517 aa17.5■□□□□ 0.39
TPM1-206ENST00000358278 LARP1BQ659C4 914 aaKnown RBP17.5■□□□□ 0.39
TPM1-206ENST00000358278 KRT40Q6A162 431 aa17.5■□□□□ 0.39
TPM1-206ENST00000358278 SLC30A10Q6XR72 485 aa17.5■□□□□ 0.39
TPM1-206ENST00000358278 ABRAQ8N0Z2 381 aa17.5■□□□□ 0.39
TPM1-206ENST00000358278 RGS22Q8NE09 1264 aa17.5■□□□□ 0.39
TPM1-206ENST00000358278 PHF20Q9BVI0 1012 aa17.5■□□□□ 0.39
TPM1-206ENST00000358278 BRMS1Q9HCU9 246 aa17.5■□□□□ 0.39
TPM1-206ENST00000358278 SLC15A5A6NIM6 579 aa17.49■□□□□ 0.39
TPM1-206ENST00000358278 HSD17B4P51659 736 aa17.49■□□□□ 0.39
TPM1-206ENST00000358278 GRB14Q14449 540 aa17.49■□□□□ 0.39
TPM1-206ENST00000358278 UBE2SQ16763 222 aa17.49■□□□□ 0.39
TPM1-206ENST00000358278 GALNT17Q6IS24 598 aa17.49■□□□□ 0.39
TPM1-206ENST00000358278 USP17L6PQ6QN14 398 aa17.49■□□□□ 0.39
TPM1-206ENST00000358278 REXO1Q8N1G1 1221 aaKnown RBP17.49■□□□□ 0.39
TPM1-206ENST00000358278 SAMD3Q8N6K7 520 aa17.49■□□□□ 0.39
TPM1-206ENST00000358278 SOCS4Q8WXH5 440 aa17.49■□□□□ 0.39
TPM1-206ENST00000358278 TBC1D5Q92609 795 aa17.49■□□□□ 0.39
TPM1-206ENST00000358278 MAP3K20Q9NYL2 800 aaKnown RBP17.49■□□□□ 0.39
TPM1-206ENST00000358278 PCDHA4Q9UN74 947 aa17.49■□□□□ 0.39
TPM1-206ENST00000358278 MMP1P03956 469 aa17.48■□□□□ 0.39
TPM1-206ENST00000358278 PGK2P07205 417 aa17.48■□□□□ 0.39
TPM1-206ENST00000358278 HSPA8P11142 646 aaKnown RBP17.48■□□□□ 0.39
TPM1-206ENST00000358278 CTCFP49711 727 aaPredicted RBP17.48■□□□□ 0.39
TPM1-206ENST00000358278 SAFBQ15424 915 aaKnown RBP eCLIP17.48■□□□□ 0.39
TPM1-206ENST00000358278 DPP9Q86TI2 863 aa17.48■□□□□ 0.39
TPM1-206ENST00000358278 FBXO18Q8NFZ0 1043 aa17.48■□□□□ 0.39
TPM1-206ENST00000358278 NUDT12Q9BQG2 462 aa17.48■□□□□ 0.39
TPM1-206ENST00000358278 MAF1Q9H063 256 aa17.48■□□□□ 0.39
TPM1-206ENST00000358278 KIAA1217Q5T5P2 1943 aa17.48■□□□□ 0.39
TPM1-206ENST00000358278 MYH15Q9Y2K3 1946 aa17.48■□□□□ 0.39
TPM1-206ENST00000358278 POTEB2H3BUK9 544 aa17.47■□□□□ 0.39
TPM1-206ENST00000358278 PIK3CDO00329 1044 aa17.47■□□□□ 0.39
TPM1-206ENST00000358278 MEIS2O14770 477 aa17.47■□□□□ 0.39
TPM1-206ENST00000358278 GHRHRQ02643 423 aa17.47■□□□□ 0.39
TPM1-206ENST00000358278 FCHSD1Q86WN1 690 aa17.47■□□□□ 0.39
TPM1-206ENST00000358278 TEX2Q8IWB9 1127 aa17.47■□□□□ 0.39
TPM1-206ENST00000358278 BLIDQ8IZY5 108 aa17.47■□□□□ 0.39
TPM1-206ENST00000358278 LRRC37A2A6NM11 1700 aa17.47■□□□□ 0.39
TPM1-206ENST00000358278 SPDYE3A6NKU9 549 aa17.47■□□□□ 0.39
TPM1-206ENST00000358278 GNRH1P01148 92 aa17.47■□□□□ 0.39
TPM1-206ENST00000358278 HOXD10P28358 340 aa17.47■□□□□ 0.39
TPM1-206ENST00000358278 KRT2P35908 639 aa17.47■□□□□ 0.39
TPM1-206ENST00000358278 MORN1Q5T089 497 aa17.47■□□□□ 0.39
TPM1-206ENST00000358278 DAGLBQ8NCG7 672 aa17.47■□□□□ 0.39
TPM1-206ENST00000358278 SYTL5Q8TDW5 730 aaPredicted RBP17.47■□□□□ 0.39
TPM1-206ENST00000358278 SLC5A4Q9NY91 659 aa17.47■□□□□ 0.39
TPM1-206ENST00000358278 BIN2Q9UBW5 565 aaPredicted RBP17.47■□□□□ 0.39
TPM1-206ENST00000358278 VPS37CA5D8V6 355 aaPredicted RBP17.46■□□□□ 0.39
TPM1-206ENST00000358278 LBX1P52954 281 aa17.46■□□□□ 0.39
TPM1-206ENST00000358278 CAP1Q01518 475 aa17.46■□□□□ 0.39
TPM1-206ENST00000358278 MAP2K5Q13163 448 aa17.46■□□□□ 0.39
TPM1-206ENST00000358278 GNL2Q13823 731 aaKnown RBP17.46■□□□□ 0.39
TPM1-206ENST00000358278 RASGRP4Q8TDF6 673 aa17.46■□□□□ 0.39
TPM1-206ENST00000358278 DNAJC25-GNG10A0A024R161 153 aa17.45■□□□□ 0.38
TPM1-206ENST00000358278 SYT1P21579 422 aa17.45■□□□□ 0.38
TPM1-206ENST00000358278 RGS2P41220 211 aa17.45■□□□□ 0.38
TPM1-206ENST00000358278 CNTN2Q02246 1040 aa17.45■□□□□ 0.38
TPM1-206ENST00000358278 PRKCZQ05513 592 aa17.45■□□□□ 0.38
TPM1-206ENST00000358278 AP3B2Q13367 1082 aa17.45■□□□□ 0.38
TPM1-206ENST00000358278 NPY5RQ15761 445 aa17.45■□□□□ 0.38
TPM1-206ENST00000358278 JAKMIP3Q5VZ66 844 aa17.45■□□□□ 0.38
TPM1-206ENST00000358278 DIS3L2Q8IYB7 885 aaKnown RBP17.45■□□□□ 0.38
TPM1-206ENST00000358278 TMEM260Q9NX78 707 aa17.45■□□□□ 0.38
TPM1-206ENST00000358278 COL20A1Q9P218 1284 aa17.45■□□□□ 0.38
TPM1-206ENST00000358278 ADD3Q9UEY8 706 aaKnown RBP17.45■□□□□ 0.38
TPM1-206ENST00000358278 ADAMTS3O15072 1205 aa17.44■□□□□ 0.38
TPM1-206ENST00000358278 COBLO75128 1261 aa17.44■□□□□ 0.38
TPM1-206ENST00000358278 FOSP01100 380 aaPredicted RBP17.44■□□□□ 0.38
TPM1-206ENST00000358278 CLK2P49760 499 aaKnown RBP17.44■□□□□ 0.38
TPM1-206ENST00000358278 MCTP2Q6DN12 878 aa17.44■□□□□ 0.38
TPM1-206ENST00000358278 MCTP1Q6DN14 999 aa17.44■□□□□ 0.38
TPM1-206ENST00000358278 FAM133AQ8N9E0 248 aa17.44■□□□□ 0.38
TPM1-206ENST00000358278 PURBQ96QR8 312 aaKnown RBP17.44■□□□□ 0.38
TPM1-206ENST00000358278 RMDN3Q96TC7 470 aa17.44■□□□□ 0.38
TPM1-206ENST00000358278 APBA2Q99767 749 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms