RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 CAGE1Q8TC20 777 aa22.84■■□□□ 1.25
COL13A1-202ENST00000357811 MMTAG2Q9BU76 263 aaKnown RBP22.84■■□□□ 1.25
COL13A1-202ENST00000357811 C6orf50Q9HD87 102 aa22.84■■□□□ 1.25
COL13A1-202ENST00000357811 L1RE1Q9UN81 338 aa22.84■■□□□ 1.25
COL13A1-202ENST00000357811 CASP8Q14790 479 aa22.84■■□□□ 1.25
COL13A1-202ENST00000357811 SKIDA1Q1XH10 827 aa22.84■■□□□ 1.25
COL13A1-202ENST00000357811 NUDT12Q9BQG2 462 aa22.84■■□□□ 1.25
COL13A1-202ENST00000357811 ZMYND12Q9H0C1 365 aa22.84■■□□□ 1.25
COL13A1-202ENST00000357811 ZNHIT6Q9NWK9 470 aaKnown RBP22.84■■□□□ 1.25
COL13A1-202ENST00000357811 CNTNAP4Q9C0A0 1308 aa22.83■■□□□ 1.25
COL13A1-202ENST00000357811 SLC37A4O43826 429 aa22.83■■□□□ 1.25
COL13A1-202ENST00000357811 ERLIN1O75477 346 aa22.83■■□□□ 1.25
COL13A1-202ENST00000357811 SRGNP10124 158 aa22.83■■□□□ 1.25
COL13A1-202ENST00000357811 MFSD14BQ5SR56 506 aa22.83■■□□□ 1.25
COL13A1-202ENST00000357811 ZNF804AQ7Z570 1209 aa22.83■■□□□ 1.25
COL13A1-202ENST00000357811 CNBD1Q8NA66 436 aa22.83■■□□□ 1.25
COL13A1-202ENST00000357811 MSANTD4Q8NCY6 345 aa22.83■■□□□ 1.25
COL13A1-202ENST00000357811 MMRN2Q9H8L6 949 aa22.83■■□□□ 1.25
COL13A1-202ENST00000357811 IRS2Q9Y4H2 1338 aa22.83■■□□□ 1.25
COL13A1-202ENST00000357811 LRRIQ3A6PVS8 624 aaPredicted RBP22.83■■□□□ 1.25
COL13A1-202ENST00000357811 IPO7O95373 1038 aaKnown RBP22.83■■□□□ 1.25
COL13A1-202ENST00000357811 CCNE1P24864 410 aa22.83■■□□□ 1.25
COL13A1-202ENST00000357811 BARGINQ6ZT62 677 aa22.83■■□□□ 1.25
COL13A1-202ENST00000357811 REXO1Q8N1G1 1221 aaKnown RBP22.83■■□□□ 1.25
COL13A1-202ENST00000357811 SEMA6BQ9H3T3 888 aa22.83■■□□□ 1.25
COL13A1-202ENST00000357811 KANSL2Q9H9L4 492 aa22.83■■□□□ 1.25
COL13A1-202ENST00000357811 SAR1BQ9Y6B6 198 aa22.83■■□□□ 1.25
COL13A1-202ENST00000357811 SSBP05455 408 aaKnown RBP eCLIP22.83■■□□□ 1.24
COL13A1-202ENST00000357811 FKBP15Q5T1M5 1219 aa22.83■■□□□ 1.24
COL13A1-202ENST00000357811 LRWD1Q9UFC0 647 aa22.83■■□□□ 1.24
COL13A1-202ENST00000357811 MATR3P43243 847 aaKnown RBP eCLIP22.82■■□□□ 1.24
COL13A1-202ENST00000357811 GRAPQ13588 217 aa22.82■■□□□ 1.24
COL13A1-202ENST00000357811 UBE2SQ16763 222 aa22.82■■□□□ 1.24
COL13A1-202ENST00000357811 C2CD5Q86YS7 1000 aa22.82■■□□□ 1.24
COL13A1-202ENST00000357811 GRAPLQ8TC17 118 aaPredicted RBP22.82■■□□□ 1.24
COL13A1-202ENST00000357811 HAUS4Q9H6D7 363 aa22.82■■□□□ 1.24
COL13A1-202ENST00000357811 TBC1D7Q9P0N9 293 aa22.82■■□□□ 1.24
COL13A1-202ENST00000357811 RAB21Q9UL25 225 aa22.82■■□□□ 1.24
COL13A1-202ENST00000357811 LAMB2P55268 1798 aa22.82■■□□□ 1.24
COL13A1-202ENST00000357811 TNNI2P48788 182 aa22.82■■□□□ 1.24
COL13A1-202ENST00000357811 RAD51AP2Q09MP3 1159 aa22.82■■□□□ 1.24
COL13A1-202ENST00000357811 CCDC96Q2M329 555 aa22.82■■□□□ 1.24
COL13A1-202ENST00000357811 MIIPQ5JXC2 388 aa22.82■■□□□ 1.24
COL13A1-202ENST00000357811 CD209Q9NNX6 404 aa22.82■■□□□ 1.24
COL13A1-202ENST00000357811 SMARCAL1Q9NZC9 954 aa22.82■■□□□ 1.24
COL13A1-202ENST00000357811 MYMKA6NI61 221 aa22.81■■□□□ 1.24
COL13A1-202ENST00000357811 RIMBP2O15034 1052 aa22.81■■□□□ 1.24
COL13A1-202ENST00000357811 DNA2P51530 1060 aa22.81■■□□□ 1.24
COL13A1-202ENST00000357811 FAM193AP78312 1265 aa22.81■■□□□ 1.24
COL13A1-202ENST00000357811 GSTO1P78417 241 aa22.81■■□□□ 1.24
COL13A1-202ENST00000357811 FAM196AQ6ZSG2 479 aa22.81■■□□□ 1.24
COL13A1-202ENST00000357811 KRT25Q7Z3Z0 450 aa22.81■■□□□ 1.24
COL13A1-202ENST00000357811 ANKS1AQ92625 1134 aa22.81■■□□□ 1.24
COL13A1-202ENST00000357811 CCDC47Q96A33 483 aaKnown RBP22.81■■□□□ 1.24
COL13A1-202ENST00000357811 CDK5RAP3Q96JB5 506 aa22.81■■□□□ 1.24
COL13A1-202ENST00000357811 KIAA1551Q9HCM1 1747 aa22.81■■□□□ 1.24
COL13A1-202ENST00000357811 A0A1W2PQC6 194 aa22.81■■□□□ 1.24
COL13A1-202ENST00000357811 CXCR5P32302 372 aa22.81■■□□□ 1.24
COL13A1-202ENST00000357811 TRAPPC11Q7Z392 1133 aa22.81■■□□□ 1.24
COL13A1-202ENST00000357811 RIN2Q8WYP3 895 aaPredicted RBP22.81■■□□□ 1.24
COL13A1-202ENST00000357811 CALML4Q96GE6 196 aa22.81■■□□□ 1.24
COL13A1-202ENST00000357811 DHTKD1Q96HY7 919 aaPredicted RBP22.81■■□□□ 1.24
COL13A1-202ENST00000357811 PDE2AO00408 941 aaPredicted RBP22.8■■□□□ 1.24
COL13A1-202ENST00000357811 ZNF263O14978 683 aa22.8■■□□□ 1.24
COL13A1-202ENST00000357811 SLC16A2P36021 539 aa22.8■■□□□ 1.24
COL13A1-202ENST00000357811 DAGLBQ8NCG7 672 aa22.8■■□□□ 1.24
COL13A1-202ENST00000357811 RPGRQ92834 1020 aaKnown RBP22.8■■□□□ 1.24
COL13A1-202ENST00000357811 MLXIPQ9HAP2 919 aa22.8■■□□□ 1.24
COL13A1-202ENST00000357811 DLEC1Q9Y238 1755 aa22.8■■□□□ 1.24
COL13A1-202ENST00000357811 C6orf229H3BNL8 230 aa22.8■■□□□ 1.24
COL13A1-202ENST00000357811 GNA11P29992 359 aa22.8■■□□□ 1.24
COL13A1-202ENST00000357811 C2orf54Q08AI8 447 aa22.8■■□□□ 1.24
COL13A1-202ENST00000357811 ENOX2Q16206 610 aaKnown RBP22.8■■□□□ 1.24
COL13A1-202ENST00000357811 CALCRLQ16602 461 aa22.8■■□□□ 1.24
COL13A1-202ENST00000357811 KCNK18Q7Z418 384 aa22.8■■□□□ 1.24
COL13A1-202ENST00000357811 CCDC42Q96M95 316 aa22.8■■□□□ 1.24
COL13A1-202ENST00000357811 TANGO6Q9C0B7 1094 aa22.8■■□□□ 1.24
COL13A1-202ENST00000357811 KRT86O43790 486 aa22.8■■□□□ 1.24
COL13A1-202ENST00000357811 CACNB1Q02641 598 aaPredicted RBP22.8■■□□□ 1.24
COL13A1-202ENST00000357811 TMED8Q6PL24 325 aaPredicted RBP22.8■■□□□ 1.24
COL13A1-202ENST00000357811 PLEKHA4Q9H4M7 779 aa22.8■■□□□ 1.24
COL13A1-202ENST00000357811 MYO1AQ9UBC5 1043 aa22.8■■□□□ 1.24
COL13A1-202ENST00000357811 LDHCP07864 332 aa22.79■■□□□ 1.24
COL13A1-202ENST00000357811 CYLC1P35663 651 aaPredicted RBP22.79■■□□□ 1.24
COL13A1-202ENST00000357811 GPS2Q13227 327 aa22.79■■□□□ 1.24
COL13A1-202ENST00000357811 MXD3Q9BW11 206 aa22.79■■□□□ 1.24
COL13A1-202ENST00000357811 TTYH3Q9C0H2 523 aa22.79■■□□□ 1.24
COL13A1-202ENST00000357811 EHD2Q9NZN4 543 aa22.79■■□□□ 1.24
COL13A1-202ENST00000357811 GRB10Q13322 594 aa22.79■■□□□ 1.24
COL13A1-202ENST00000357811 TRAPPC3LQ5T215 181 aa22.79■■□□□ 1.24
COL13A1-202ENST00000357811 IPO4Q8TEX9 1081 aaKnown RBP22.79■■□□□ 1.24
COL13A1-202ENST00000357811 CALCOCO1Q9P1Z2 691 aa22.79■■□□□ 1.24
COL13A1-202ENST00000357811 KRT83P78385 493 aa22.78■■□□□ 1.24
COL13A1-202ENST00000357811 SV2BQ7L1I2 683 aa22.78■■□□□ 1.24
COL13A1-202ENST00000357811 DEF6Q9H4E7 631 aa22.78■■□□□ 1.24
COL13A1-202ENST00000357811 BLOC1S4Q9NUP1 217 aa22.78■■□□□ 1.24
COL13A1-202ENST00000357811 LEMD3Q9Y2U8 911 aa22.78■■□□□ 1.24
COL13A1-202ENST00000357811 BICDL2A1A5D9 508 aa22.78■■□□□ 1.24
COL13A1-202ENST00000357811 POTEB2H3BUK9 544 aa22.78■■□□□ 1.24
COL13A1-202ENST00000357811 PSMD14O00487 310 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms