RNA–Protein interactions for RNA: ENST00000357613.8

TMEM170A-201, Transcript of transmembrane protein 170A, humanhuman

TSL 1 (best) BASIC

Gene TMEM170A, Length 4,959 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-201ENST00000357613 UTP11Q9Y3A2 253 aaKnown RBP13.48□□□□□ -0.25
TMEM170A-201ENST00000357613 SH2B2O14492 632 aaPredicted RBP13.48□□□□□ -0.25
TMEM170A-201ENST00000357613 HNRNPDLO14979 420 aaKnown RBP13.48□□□□□ -0.25
TMEM170A-201ENST00000357613 CASP14P31944 242 aa13.48□□□□□ -0.25
TMEM170A-201ENST00000357613 POLGP54098 1239 aaPredicted RBP13.48□□□□□ -0.25
TMEM170A-201ENST00000357613 ARFGAP2Q8N6H7 521 aa13.48□□□□□ -0.25
TMEM170A-201ENST00000357613 CCDC17Q96LX7 622 aa13.48□□□□□ -0.25
TMEM170A-201ENST00000357613 STRBPQ96SI9 672 aaKnown RBP13.48□□□□□ -0.25
TMEM170A-201ENST00000357613 TEKT3Q9BXF9 490 aa13.48□□□□□ -0.25
TMEM170A-201ENST00000357613 CHGBP05060 677 aa13.47□□□□□ -0.25
TMEM170A-201ENST00000357613 GPATCH4Q5T3I0 446 aaKnown RBP13.47□□□□□ -0.25
TMEM170A-201ENST00000357613 FMNL3Q8IVF7 1028 aa13.47□□□□□ -0.25
TMEM170A-201ENST00000357613 CDAN1Q8IWY9 1227 aa13.47□□□□□ -0.25
TMEM170A-201ENST00000357613 LINC00301Q8NCQ3 95 aa13.47□□□□□ -0.25
TMEM170A-201ENST00000357613 FMNL1O95466 1100 aaPredicted RBP13.47□□□□□ -0.25
TMEM170A-201ENST00000357613 CALRP27797 417 aaKnown RBP13.47□□□□□ -0.25
TMEM170A-201ENST00000357613 CCDC121Q6ZUS5 278 aa13.47□□□□□ -0.25
TMEM170A-201ENST00000357613 LARP4BQ92615 738 aaKnown RBP13.47□□□□□ -0.25
TMEM170A-201ENST00000357613 NAP1L3Q99457 506 aaPredicted RBP13.47□□□□□ -0.25
TMEM170A-201ENST00000357613 BEGAINQ9BUH8 593 aa13.47□□□□□ -0.25
TMEM170A-201ENST00000357613 STMN4Q9H169 189 aaPredicted RBP13.47□□□□□ -0.25
TMEM170A-201ENST00000357613 KANSL2Q9H9L4 492 aa13.47□□□□□ -0.25
TMEM170A-201ENST00000357613 ENC1O14682 589 aa13.47□□□□□ -0.25
TMEM170A-201ENST00000357613 NBPF11Q86T75 865 aa13.47□□□□□ -0.25
TMEM170A-201ENST00000357613 ANKS4BQ8N8V4 417 aa13.47□□□□□ -0.25
TMEM170A-201ENST00000357613 POMGNT1Q8WZA1 660 aa13.47□□□□□ -0.25
TMEM170A-201ENST00000357613 ZNF215Q9UL58 517 aaPredicted RBP13.47□□□□□ -0.25
TMEM170A-201ENST00000357613 PYCARDQ9ULZ3 195 aa13.47□□□□□ -0.25
TMEM170A-201ENST00000357613 COL4A3BPQ9Y5P4 624 aa13.47□□□□□ -0.25
TMEM170A-201ENST00000357613 CPSF1Q10570 1443 aaKnown RBP13.47□□□□□ -0.25
TMEM170A-201ENST00000357613 SYNJ2BP-COX16A0A087WUM0 186 aa13.47□□□□□ -0.25
TMEM170A-201ENST00000357613 CASP1P29466 404 aa13.47□□□□□ -0.25
TMEM170A-201ENST00000357613 HSPA1LP34931 641 aa13.47□□□□□ -0.25
TMEM170A-201ENST00000357613 GRAPQ13588 217 aa13.47□□□□□ -0.25
TMEM170A-201ENST00000357613 GRAPLQ8TC17 118 aaPredicted RBP13.47□□□□□ -0.25
TMEM170A-201ENST00000357613 TIGD1Q96MW7 591 aa13.47□□□□□ -0.25
TMEM170A-201ENST00000357613 PCIF1Q9H4Z3 704 aa13.47□□□□□ -0.25
TMEM170A-201ENST00000357613 NKIRAS1Q9NYS0 192 aa13.47□□□□□ -0.25
TMEM170A-201ENST00000357613 COX16Q9P0S2 106 aa13.47□□□□□ -0.25
TMEM170A-201ENST00000357613 ZBTB7AO95365 584 aa13.46□□□□□ -0.25
TMEM170A-201ENST00000357613 BMP3P12645 472 aa13.46□□□□□ -0.25
TMEM170A-201ENST00000357613 SPOUT1Q5T280 376 aaKnown RBP13.46□□□□□ -0.25
TMEM170A-201ENST00000357613 SPATA1Q5VX52 437 aa13.46□□□□□ -0.25
TMEM170A-201ENST00000357613 ZNF577Q9BSK1 485 aa13.46□□□□□ -0.25
TMEM170A-201ENST00000357613 PCDHA4Q9UN74 947 aa13.46□□□□□ -0.25
TMEM170A-201ENST00000357613 SAR1BQ9Y6B6 198 aa13.46□□□□□ -0.25
TMEM170A-201ENST00000357613 NCOA3Q9Y6Q9 1424 aa13.46□□□□□ -0.25
TMEM170A-201ENST00000357613 M0QZ92 97 aa13.46□□□□□ -0.25
TMEM170A-201ENST00000357613 LRRN2O75325 713 aa13.46□□□□□ -0.25
TMEM170A-201ENST00000357613 IFNAR1P17181 557 aa13.46□□□□□ -0.25
TMEM170A-201ENST00000357613 NR2F2P24468 414 aa13.46□□□□□ -0.25
TMEM170A-201ENST00000357613 TBC1D9BQ66K14 1250 aa13.46□□□□□ -0.25
TMEM170A-201ENST00000357613 SLFN12Q8IYM2 578 aa13.46□□□□□ -0.25
TMEM170A-201ENST00000357613 GPR161Q8N6U8 529 aaKnown RBP13.46□□□□□ -0.25
TMEM170A-201ENST00000357613 SH3RF3Q8TEJ3 882 aaPredicted RBP13.46□□□□□ -0.25
TMEM170A-201ENST00000357613 CNOT6LQ96LI5 555 aaKnown RBP13.46□□□□□ -0.25
TMEM170A-201ENST00000357613 TUBGCP2Q9BSJ2 902 aa13.46□□□□□ -0.25
TMEM170A-201ENST00000357613 CDK8P49336 464 aa13.46□□□□□ -0.26
TMEM170A-201ENST00000357613 CFAP221Q4G0U5 840 aa13.46□□□□□ -0.26
TMEM170A-201ENST00000357613 TTC14Q96N46 770 aa13.46□□□□□ -0.26
TMEM170A-201ENST00000357613 CCDC94Q9BW85 323 aaPredicted RBP13.46□□□□□ -0.26
TMEM170A-201ENST00000357613 TDRD3Q9H7E2 651 aaKnown RBP13.46□□□□□ -0.26
TMEM170A-201ENST00000357613 BSDC1Q9NW68 430 aaPredicted RBP13.46□□□□□ -0.26
TMEM170A-201ENST00000357613 SEPT9Q9UHD8 586 aaPredicted RBP13.46□□□□□ -0.26
TMEM170A-201ENST00000357613 MINPP1Q9UNW1 487 aa13.46□□□□□ -0.26
TMEM170A-201ENST00000357613 PPP2R2CQ9Y2T4 447 aa13.46□□□□□ -0.26
TMEM170A-201ENST00000357613 EIF2AK2P19525 551 aaKnown RBP13.45□□□□□ -0.26
TMEM170A-201ENST00000357613 TBC1D10CQ8IV04 446 aa13.45□□□□□ -0.26
TMEM170A-201ENST00000357613 SMC6Q96SB8 1091 aa13.45□□□□□ -0.26
TMEM170A-201ENST00000357613 FOXP1Q9H334 677 aaPredicted RBP13.45□□□□□ -0.26
TMEM170A-201ENST00000357613 SAMSN1Q9NSI8 373 aaKnown RBP13.45□□□□□ -0.26
TMEM170A-201ENST00000357613 INO80B-WBP1J3KQ70 363 aa13.45□□□□□ -0.26
TMEM170A-201ENST00000357613 GH2P01242 217 aa13.45□□□□□ -0.26
TMEM170A-201ENST00000357613 MMP1P03956 469 aa13.45□□□□□ -0.26
TMEM170A-201ENST00000357613 LONP1P36776 959 aaKnown RBP13.45□□□□□ -0.26
TMEM170A-201ENST00000357613 DPP9Q86TI2 863 aa13.45□□□□□ -0.26
TMEM170A-201ENST00000357613 CCDC117Q8IWD4 279 aaPredicted RBP13.45□□□□□ -0.26
TMEM170A-201ENST00000357613 LRRC8AQ8IWT6 810 aa13.45□□□□□ -0.26
TMEM170A-201ENST00000357613 INO80BQ9C086 356 aaPredicted RBP13.45□□□□□ -0.26
TMEM170A-201ENST00000357613 NDUFAB1O14561 156 aa13.45□□□□□ -0.26
TMEM170A-201ENST00000357613 ATF7P17544 494 aaPredicted RBP13.45□□□□□ -0.26
TMEM170A-201ENST00000357613 CUL4AQ13619 759 aa13.45□□□□□ -0.26
TMEM170A-201ENST00000357613 KCTD2Q14681 263 aa13.45□□□□□ -0.26
TMEM170A-201ENST00000357613 LONRF2Q1L5Z9 754 aa13.45□□□□□ -0.26
TMEM170A-201ENST00000357613 C10orf67Q8IYJ2 551 aa13.45□□□□□ -0.26
TMEM170A-201ENST00000357613 GPATCH11Q8N954 259 aa13.45□□□□□ -0.26
TMEM170A-201ENST00000357613 ZMYND15Q9H091 742 aa13.45□□□□□ -0.26
TMEM170A-201ENST00000357613 NBPF26B4DH59 902 aa13.45□□□□□ -0.26
TMEM170A-201ENST00000357613 SCARF1Q14162 830 aa13.45□□□□□ -0.26
TMEM170A-201ENST00000357613 NBPF10Q6P3W6 841 aaKnown RBP13.45□□□□□ -0.26
TMEM170A-201ENST00000357613 GBP6Q6ZN66 633 aa13.45□□□□□ -0.26
TMEM170A-201ENST00000357613 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.45□□□□□ -0.26
TMEM170A-201ENST00000357613 NBPF15Q8N660 670 aa13.45□□□□□ -0.26
TMEM170A-201ENST00000357613 DPH5Q9H2P9 285 aa13.45□□□□□ -0.26
TMEM170A-201ENST00000357613 SAMD15Q9P1V8 674 aa13.45□□□□□ -0.26
TMEM170A-201ENST00000357613 RPS6KA4O75676 772 aa13.44□□□□□ -0.26
TMEM170A-201ENST00000357613 OSTNP61366 133 aa13.44□□□□□ -0.26
TMEM170A-201ENST00000357613 ASPRV1Q53RT3 343 aa13.44□□□□□ -0.26
TMEM170A-201ENST00000357613 IFT20Q8IY31 132 aa13.44□□□□□ -0.26
TMEM170A-201ENST00000357613 CPS1P31327 1500 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms