RNA–Protein interactions for RNA: ENST00000357395.7

SYNE2-203, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 21,555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-203ENST00000357395 IRX5P78411 483 aaPredicted RBP5.08□□□□□ -1.6
SYNE2-203ENST00000357395 STK17AQ9UEE5 414 aa5.08□□□□□ -1.6
SYNE2-203ENST00000357395 ZFYVE9O95405 1425 aa5.08□□□□□ -1.6
SYNE2-203ENST00000357395 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.08□□□□□ -1.6
SYNE2-203ENST00000357395 DNAJC3Q13217 504 aa5.08□□□□□ -1.6
SYNE2-203ENST00000357395 DGCR14Q96DF8 476 aaKnown RBP5.08□□□□□ -1.6
SYNE2-203ENST00000357395 SYNGAP1Q96PV0 1343 aa5.07□□□□□ -1.6
SYNE2-203ENST00000357395 CCDC194A0A1B0GVG4 234 aa5.07□□□□□ -1.6
SYNE2-203ENST00000357395 VWA5AO00534 786 aa5.07□□□□□ -1.6
SYNE2-203ENST00000357395 CCT5P48643 541 aa5.07□□□□□ -1.6
SYNE2-203ENST00000357395 PAPOLAP51003 745 aaKnown RBP5.07□□□□□ -1.6
SYNE2-203ENST00000357395 LRRC36Q1X8D7 754 aa5.07□□□□□ -1.6
SYNE2-203ENST00000357395 MLPHQ9BV36 600 aaPredicted RBP5.07□□□□□ -1.6
SYNE2-203ENST00000357395 SPAG6O75602 509 aa5.07□□□□□ -1.6
SYNE2-203ENST00000357395 FCGR1AP12314 374 aa5.07□□□□□ -1.6
SYNE2-203ENST00000357395 PSMD6Q15008 389 aa5.07□□□□□ -1.6
SYNE2-203ENST00000357395 SGSM3Q96HU1 749 aa5.07□□□□□ -1.6
SYNE2-203ENST00000357395 TOM1L1O75674 476 aa5.07□□□□□ -1.6
SYNE2-203ENST00000357395 DAB2P98082 770 aa5.07□□□□□ -1.6
SYNE2-203ENST00000357395 THOC5Q13769 683 aaKnown RBP5.07□□□□□ -1.6
SYNE2-203ENST00000357395 PDLIM2Q96JY6 352 aa5.07□□□□□ -1.6
SYNE2-203ENST00000357395 ERBINQ96RT1 1412 aa5.07□□□□□ -1.6
SYNE2-203ENST00000357395 BTBD7Q9P203 1132 aa5.07□□□□□ -1.6
SYNE2-203ENST00000357395 IDEP14735 1019 aa5.07□□□□□ -1.6
SYNE2-203ENST00000357395 CNGA3Q16281 694 aa5.07□□□□□ -1.6
SYNE2-203ENST00000357395 ARHGEF25Q86VW2 580 aa5.07□□□□□ -1.6
SYNE2-203ENST00000357395 SKA1Q96BD8 255 aa5.07□□□□□ -1.6
SYNE2-203ENST00000357395 CHAMP1Q96JM3 812 aa5.07□□□□□ -1.6
SYNE2-203ENST00000357395 SMG5Q9UPR3 1016 aaKnown RBP5.07□□□□□ -1.6
SYNE2-203ENST00000357395 NR1D1P20393 614 aa5.07□□□□□ -1.6
SYNE2-203ENST00000357395 SPARCL1Q14515 664 aa5.07□□□□□ -1.6
SYNE2-203ENST00000357395 CEP55Q53EZ4 464 aa5.07□□□□□ -1.6
SYNE2-203ENST00000357395 HSPA1LP34931 641 aa5.07□□□□□ -1.6
SYNE2-203ENST00000357395 BPIFB4P59827 614 aa5.07□□□□□ -1.6
SYNE2-203ENST00000357395 INPP5DQ92835 1189 aa5.07□□□□□ -1.6
SYNE2-203ENST00000357395 ADAM21Q9UKJ8 722 aa5.07□□□□□ -1.6
SYNE2-203ENST00000357395 THOC7Q6I9Y2 204 aaKnown RBP5.07□□□□□ -1.6
SYNE2-203ENST00000357395 PSPC1Q8WXF1 523 aaKnown RBP5.07□□□□□ -1.6
SYNE2-203ENST00000357395 ORC3Q9UBD5 711 aaPredicted RBP5.07□□□□□ -1.6
SYNE2-203ENST00000357395 FAM177BA6PVY3 158 aa5.07□□□□□ -1.6
SYNE2-203ENST00000357395 PRDM1O75626 825 aa5.07□□□□□ -1.6
SYNE2-203ENST00000357395 AP1G2O75843 785 aa5.07□□□□□ -1.6
SYNE2-203ENST00000357395 FAM107AO95990 144 aa5.07□□□□□ -1.6
SYNE2-203ENST00000357395 GARSP41250 739 aaKnown RBP5.07□□□□□ -1.6
SYNE2-203ENST00000357395 EXOSC9Q06265 439 aaKnown RBP5.07□□□□□ -1.6
SYNE2-203ENST00000357395 PPP4R3CPQ6ZMV5 832 aa5.07□□□□□ -1.6
SYNE2-203ENST00000357395 PAPOLBQ9NRJ5 636 aaKnown RBP5.07□□□□□ -1.6
SYNE2-203ENST00000357395 SMIM31A0A1B0GVY4 71 aa5.07□□□□□ -1.6
SYNE2-203ENST00000357395 ATP2C2O75185 946 aa5.07□□□□□ -1.6
SYNE2-203ENST00000357395 ATICP31939 592 aa5.07□□□□□ -1.6
SYNE2-203ENST00000357395 CEP85Q6P2H3 762 aa5.07□□□□□ -1.6
SYNE2-203ENST00000357395 SLITRK6Q9H5Y7 841 aa5.07□□□□□ -1.6
SYNE2-203ENST00000357395 DNM2P50570 870 aa5.07□□□□□ -1.6
SYNE2-203ENST00000357395 ERLEC1Q96DZ1 483 aa5.07□□□□□ -1.6
SYNE2-203ENST00000357395 CARD10Q9BWT7 1032 aa5.07□□□□□ -1.6
SYNE2-203ENST00000357395 FRMD8Q9BZ67 464 aaPredicted RBP5.07□□□□□ -1.6
SYNE2-203ENST00000357395 FAM169AQ9Y6X4 670 aa5.07□□□□□ -1.6
SYNE2-203ENST00000357395 SAGE2PA6NJ88 616 aa5.07□□□□□ -1.6
SYNE2-203ENST00000357395 PARNO95453 639 aaKnown RBP5.07□□□□□ -1.6
SYNE2-203ENST00000357395 MRPS15P82914 257 aaKnown RBP5.07□□□□□ -1.6
SYNE2-203ENST00000357395 PAK1Q13153 545 aa5.07□□□□□ -1.6
SYNE2-203ENST00000357395 TDRD7Q8NHU6 1098 aaKnown RBP5.07□□□□□ -1.6
SYNE2-203ENST00000357395 H0Y3Z8 333 aa5.07□□□□□ -1.6
SYNE2-203ENST00000357395 DKC1O60832 514 aaKnown RBP eCLIP5.07□□□□□ -1.6
SYNE2-203ENST00000357395 ORC2Q13416 577 aaPredicted RBP5.07□□□□□ -1.6
SYNE2-203ENST00000357395 PPP2R3CQ969Q6 453 aa5.07□□□□□ -1.6
SYNE2-203ENST00000357395 LRCH1Q9Y2L9 728 aa5.07□□□□□ -1.6
SYNE2-203ENST00000357395 GSTA5Q7RTV2 222 aa5.07□□□□□ -1.6
SYNE2-203ENST00000357395 ZNF229Q9UJW7 825 aa5.07□□□□□ -1.6
SYNE2-203ENST00000357395 METTL14Q9HCE5 456 aaKnown RBP5.07□□□□□ -1.6
SYNE2-203ENST00000357395 MAGEE1Q9HCI5 957 aa5.07□□□□□ -1.6
SYNE2-203ENST00000357395 KCND1Q9NSA2 647 aa5.07□□□□□ -1.6
SYNE2-203ENST00000357395 INTS9Q9NV88 658 aaKnown RBP5.07□□□□□ -1.6
SYNE2-203ENST00000357395 ACTN1P12814 892 aa5.07□□□□□ -1.6
SYNE2-203ENST00000357395 ATP8B2P98198 1209 aa5.07□□□□□ -1.6
SYNE2-203ENST00000357395 ANO1Q5XXA6 986 aa5.07□□□□□ -1.6
SYNE2-203ENST00000357395 PDZD4Q76G19 769 aaPredicted RBP5.07□□□□□ -1.6
SYNE2-203ENST00000357395 GIPC2Q8TF65 315 aa5.07□□□□□ -1.6
SYNE2-203ENST00000357395 SNTNA6NMZ2 147 aa5.07□□□□□ -1.6
SYNE2-203ENST00000357395 RSBN1LQ6PCB5 846 aaPredicted RBP5.07□□□□□ -1.6
SYNE2-203ENST00000357395 ROPN1BQ9BZX4 212 aaPredicted RBP5.07□□□□□ -1.6
SYNE2-203ENST00000357395 ROPN1Q9HAT0 212 aaPredicted RBP5.07□□□□□ -1.6
SYNE2-203ENST00000357395 PIK3R4Q99570 1358 aa5.07□□□□□ -1.6
SYNE2-203ENST00000357395 KATNA1O75449 491 aa5.07□□□□□ -1.6
SYNE2-203ENST00000357395 DZIP3Q86Y13 1208 aaKnown RBP5.07□□□□□ -1.6
SYNE2-203ENST00000357395 CCDC127Q96BQ5 260 aa5.07□□□□□ -1.6
SYNE2-203ENST00000357395 GMNCA6NCL1 334 aa5.06□□□□□ -1.6
SYNE2-203ENST00000357395 BYSLQ13895 437 aaKnown RBP5.06□□□□□ -1.6
SYNE2-203ENST00000357395 CSGALNACT2Q8N6G5 542 aa5.06□□□□□ -1.6
SYNE2-203ENST00000357395 PARD3Q8TEW0 1356 aa5.06□□□□□ -1.6
SYNE2-203ENST00000357395 GJB2P29033 226 aa5.06□□□□□ -1.6
SYNE2-203ENST00000357395 MINK1Q8N4C8 1332 aaPredicted RBP5.06□□□□□ -1.6
SYNE2-203ENST00000357395 HP1BP3Q5SSJ5 553 aaPredicted RBP5.06□□□□□ -1.6
SYNE2-203ENST00000357395 TRIM68Q6AZZ1 485 aa5.06□□□□□ -1.6
SYNE2-203ENST00000357395 PDCD6IPQ8WUM4 868 aaKnown RBP5.06□□□□□ -1.6
SYNE2-203ENST00000357395 PKD2L2Q9NZM6 624 aa5.06□□□□□ -1.6
SYNE2-203ENST00000357395 STAT2P52630 851 aa5.06□□□□□ -1.6
SYNE2-203ENST00000357395 UBXN1Q04323 297 aa5.06□□□□□ -1.6
SYNE2-203ENST00000357395 SPTY2D1Q68D10 685 aaPredicted RBP5.06□□□□□ -1.6
SYNE2-203ENST00000357395 SLC4A2P04920 1241 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms