RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 NPY5RQ15761 445 aa9.15□□□□□ -0.95
CDC42SE1-201ENST00000357235 AMOTL1Q8IY63 956 aa9.15□□□□□ -0.95
CDC42SE1-201ENST00000357235 EHBP1Q8NDI1 1231 aa9.15□□□□□ -0.95
CDC42SE1-201ENST00000357235 CCDC26Q8TAB7 109 aa9.15□□□□□ -0.95
CDC42SE1-201ENST00000357235 SLC4A9Q96Q91 983 aa9.15□□□□□ -0.95
CDC42SE1-201ENST00000357235 MMRN2Q9H8L6 949 aa9.15□□□□□ -0.95
CDC42SE1-201ENST00000357235 MLXIPQ9HAP2 919 aa9.15□□□□□ -0.95
CDC42SE1-201ENST00000357235 EXOC1Q9NV70 894 aa9.15□□□□□ -0.95
CDC42SE1-201ENST00000357235 PNPLA7Q6ZV29 1317 aa9.15□□□□□ -0.95
CDC42SE1-201ENST00000357235 TJP1Q07157 1748 aa9.14□□□□□ -0.95
CDC42SE1-201ENST00000357235 AKR1B10O60218 316 aa9.14□□□□□ -0.95
CDC42SE1-201ENST00000357235 MOCS3O95396 460 aa9.14□□□□□ -0.95
CDC42SE1-201ENST00000357235 CYP19A1P11511 503 aaPredicted RBP9.14□□□□□ -0.95
CDC42SE1-201ENST00000357235 HSPA1LP34931 641 aa9.14□□□□□ -0.95
CDC42SE1-201ENST00000357235 ATP1A2P50993 1020 aa9.14□□□□□ -0.95
CDC42SE1-201ENST00000357235 RWDD2BP57060 319 aa9.14□□□□□ -0.95
CDC42SE1-201ENST00000357235 RBBP5Q15291 538 aaKnown RBP9.14□□□□□ -0.95
CDC42SE1-201ENST00000357235 CCDC152Q4G0S7 254 aa9.14□□□□□ -0.95
CDC42SE1-201ENST00000357235 BICDL1Q6ZP65 573 aa9.14□□□□□ -0.95
CDC42SE1-201ENST00000357235 CEP57Q86XR8 500 aa9.14□□□□□ -0.95
CDC42SE1-201ENST00000357235 ADSSL1Q8N142 457 aa9.14□□□□□ -0.95
CDC42SE1-201ENST00000357235 PAIP2Q9BPZ3 127 aaKnown RBP9.14□□□□□ -0.95
CDC42SE1-201ENST00000357235 LRRC1Q9BTT6 524 aa9.14□□□□□ -0.95
CDC42SE1-201ENST00000357235 IFIH1Q9BYX4 1025 aaKnown RBP9.14□□□□□ -0.95
CDC42SE1-201ENST00000357235 CPVLQ9H3G5 476 aa9.14□□□□□ -0.95
CDC42SE1-201ENST00000357235 NIP7Q9Y221 180 aaKnown RBP eCLIP9.14□□□□□ -0.95
CDC42SE1-201ENST00000357235 FRMD3A2A2Y4 597 aa9.14□□□□□ -0.95
CDC42SE1-201ENST00000357235 NKRFO15226 690 aaKnown RBP eCLIP9.14□□□□□ -0.95
CDC42SE1-201ENST00000357235 RTN2O75298 545 aa9.14□□□□□ -0.95
CDC42SE1-201ENST00000357235 CALM1P0DP23 149 aa9.14□□□□□ -0.95
CDC42SE1-201ENST00000357235 CALM2P0DP24 149 aa9.14□□□□□ -0.95
CDC42SE1-201ENST00000357235 CALM3P0DP25 149 aa9.14□□□□□ -0.95
CDC42SE1-201ENST00000357235 FCER1AP12319 257 aa9.14□□□□□ -0.95
CDC42SE1-201ENST00000357235 DNM2P50570 870 aa9.14□□□□□ -0.95
CDC42SE1-201ENST00000357235 IRAK1P51617 712 aa9.14□□□□□ -0.95
CDC42SE1-201ENST00000357235 NAA25Q14CX7 972 aa9.14□□□□□ -0.95
CDC42SE1-201ENST00000357235 PPP2R5BQ15173 497 aa9.14□□□□□ -0.95
CDC42SE1-201ENST00000357235 CEP85LQ5SZL2 805 aa9.14□□□□□ -0.95
CDC42SE1-201ENST00000357235 BLIDQ8IZY5 108 aa9.14□□□□□ -0.95
CDC42SE1-201ENST00000357235 CNOT6LQ96LI5 555 aaKnown RBP9.14□□□□□ -0.95
CDC42SE1-201ENST00000357235 TANGO6Q9C0B7 1094 aa9.14□□□□□ -0.95
CDC42SE1-201ENST00000357235 TMEM60Q9H2L4 133 aa9.14□□□□□ -0.95
CDC42SE1-201ENST00000357235 DMGDHQ9UI17 866 aaKnown RBP9.14□□□□□ -0.95
CDC42SE1-201ENST00000357235 CAPN11Q9UMQ6 739 aa9.14□□□□□ -0.95
CDC42SE1-201ENST00000357235 FAM205AQ6ZU69 1335 aa9.14□□□□□ -0.95
CDC42SE1-201ENST00000357235 CNTNAP5Q8WYK1 1306 aa9.14□□□□□ -0.95
CDC42SE1-201ENST00000357235 NUTM2BA6NNL0 878 aaPredicted RBP9.13□□□□□ -0.95
CDC42SE1-201ENST00000357235 NUTM2EB1AL46 878 aaPredicted RBP9.13□□□□□ -0.95
CDC42SE1-201ENST00000357235 NCK2O43639 380 aa9.13□□□□□ -0.95
CDC42SE1-201ENST00000357235 BUB1O43683 1085 aa9.13□□□□□ -0.95
CDC42SE1-201ENST00000357235 SHOX2O60902 331 aaPredicted RBP9.13□□□□□ -0.95
CDC42SE1-201ENST00000357235 GNGT1P63211 74 aa9.13□□□□□ -0.95
CDC42SE1-201ENST00000357235 NKX1-1Q15270 411 aaPredicted RBP9.13□□□□□ -0.95
CDC42SE1-201ENST00000357235 KCTD19Q17RG1 926 aaPredicted RBP9.13□□□□□ -0.95
CDC42SE1-201ENST00000357235 LETM2Q2VYF4 491 aa9.13□□□□□ -0.95
CDC42SE1-201ENST00000357235 WLSQ5T9L3 541 aa9.13□□□□□ -0.95
CDC42SE1-201ENST00000357235 NFRKBQ6P4R8 1299 aa9.13□□□□□ -0.95
CDC42SE1-201ENST00000357235 CCNI2Q6ZMN8 369 aaPredicted RBP9.13□□□□□ -0.95
CDC42SE1-201ENST00000357235 STAG2Q8N3U4 1231 aa9.13□□□□□ -0.95
CDC42SE1-201ENST00000357235 IFT81Q8WYA0 676 aa9.13□□□□□ -0.95
CDC42SE1-201ENST00000357235 DNAJC7Q99615 494 aa9.13□□□□□ -0.95
CDC42SE1-201ENST00000357235 CENPHQ9H3R5 247 aa9.13□□□□□ -0.95
CDC42SE1-201ENST00000357235 KLC4Q9NSK0 619 aa9.13□□□□□ -0.95
CDC42SE1-201ENST00000357235 STX8Q9UNK0 236 aa9.13□□□□□ -0.95
CDC42SE1-201ENST00000357235 CAPN6Q9Y6Q1 641 aa9.13□□□□□ -0.95
CDC42SE1-201ENST00000357235 AKAP11Q9UKA4 1901 aa9.13□□□□□ -0.95
CDC42SE1-201ENST00000357235 KCPQ6ZWJ8 1503 aa9.13□□□□□ -0.95
CDC42SE1-201ENST00000357235 USO1O60763 962 aaKnown RBP9.13□□□□□ -0.95
CDC42SE1-201ENST00000357235 PRPF6O94906 941 aaKnown RBP9.13□□□□□ -0.95
CDC42SE1-201ENST00000357235 FSBPO95073 299 aa9.13□□□□□ -0.95
CDC42SE1-201ENST00000357235 GOLGA8HP0CJ92 632 aa9.13□□□□□ -0.95
CDC42SE1-201ENST00000357235 EZRP15311 586 aaKnown RBP9.13□□□□□ -0.95
CDC42SE1-201ENST00000357235 FNTAP49354 379 aa9.13□□□□□ -0.95
CDC42SE1-201ENST00000357235 CDR1P51861 262 aa9.13□□□□□ -0.95
CDC42SE1-201ENST00000357235 TRAF1Q13077 416 aa9.13□□□□□ -0.95
CDC42SE1-201ENST00000357235 CAVIN4Q5BKX8 364 aa9.13□□□□□ -0.95
CDC42SE1-201ENST00000357235 IQCEQ6IPM2 695 aa9.13□□□□□ -0.95
CDC42SE1-201ENST00000357235 B4GALNT4Q76KP1 1039 aa9.13□□□□□ -0.95
CDC42SE1-201ENST00000357235 TNFRSF25Q93038 417 aa9.13□□□□□ -0.95
CDC42SE1-201ENST00000357235 CAPS2Q9BXY5 557 aa9.13□□□□□ -0.95
CDC42SE1-201ENST00000357235 SLC39A2Q9NP94 309 aa9.13□□□□□ -0.95
CDC42SE1-201ENST00000357235 ESYT3A0FGR9 886 aa9.13□□□□□ -0.95
CDC42SE1-201ENST00000357235 TACC1O75410 805 aa9.13□□□□□ -0.95
CDC42SE1-201ENST00000357235 FECHP22830 423 aa9.13□□□□□ -0.95
CDC42SE1-201ENST00000357235 EEF1GP26641 437 aaKnown RBP9.13□□□□□ -0.95
CDC42SE1-201ENST00000357235 LONP1P36776 959 aaKnown RBP9.13□□□□□ -0.95
CDC42SE1-201ENST00000357235 RBM5P52756 815 aaKnown RBP eCLIP9.13□□□□□ -0.95
CDC42SE1-201ENST00000357235 ICA1Q05084 483 aa9.13□□□□□ -0.95
CDC42SE1-201ENST00000357235 STK4Q13043 487 aa9.13□□□□□ -0.95
CDC42SE1-201ENST00000357235 TDRD12Q587J7 1177 aaKnown RBP9.13□□□□□ -0.95
CDC42SE1-201ENST00000357235 PAPD7Q5XG87 772 aaKnown RBP9.13□□□□□ -0.95
CDC42SE1-201ENST00000357235 ANKRD40Q6AI12 368 aa9.13□□□□□ -0.95
CDC42SE1-201ENST00000357235 ZNF513Q8N8E2 541 aaPredicted RBP9.13□□□□□ -0.95
CDC42SE1-201ENST00000357235 PYM1Q9BRP8 204 aaKnown RBP9.13□□□□□ -0.95
CDC42SE1-201ENST00000357235 VAT1LQ9HCJ6 419 aa9.13□□□□□ -0.95
CDC42SE1-201ENST00000357235 MCM9Q9NXL9 1143 aa9.13□□□□□ -0.95
CDC42SE1-201ENST00000357235 TFCP2L1Q9NZI6 479 aa9.13□□□□□ -0.95
CDC42SE1-201ENST00000357235 CAMTA1Q9Y6Y1 1673 aa9.12□□□□□ -0.95
CDC42SE1-201ENST00000357235 AGPSO00116 658 aa9.12□□□□□ -0.95
CDC42SE1-201ENST00000357235 AARSP49588 968 aaKnown RBP eCLIP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms