RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 IQCB1Q15051 598 aa6.04□□□□□ -1.44
PTPRD-202ENST00000356435 CCDC93Q567U6 631 aa6.04□□□□□ -1.44
PTPRD-202ENST00000356435 DALRD3Q5D0E6 543 aaKnown RBP6.04□□□□□ -1.44
PTPRD-202ENST00000356435 FAM47AQ5JRC9 791 aa6.04□□□□□ -1.44
PTPRD-202ENST00000356435 FAM196AQ6ZSG2 479 aa6.04□□□□□ -1.44
PTPRD-202ENST00000356435 ITM2BQ9Y287 266 aa6.04□□□□□ -1.44
PTPRD-202ENST00000356435 CLGNO14967 610 aa6.04□□□□□ -1.44
PTPRD-202ENST00000356435 RASSF2P50749 326 aa6.04□□□□□ -1.44
PTPRD-202ENST00000356435 NDUFAF2Q8N183 169 aa6.04□□□□□ -1.44
PTPRD-202ENST00000356435 KBTBD3Q8NAB2 608 aa6.04□□□□□ -1.44
PTPRD-202ENST00000356435 SLC7A3Q8WY07 619 aa6.04□□□□□ -1.44
PTPRD-202ENST00000356435 MYL10Q9BUA6 226 aa6.04□□□□□ -1.44
PTPRD-202ENST00000356435 STAP2Q9UGK3 403 aa6.04□□□□□ -1.44
PTPRD-202ENST00000356435 ADGRB2O60241 1585 aa6.04□□□□□ -1.44
PTPRD-202ENST00000356435 SEMA3EO15041 775 aa6.04□□□□□ -1.44
PTPRD-202ENST00000356435 DLATP10515 647 aaKnown RBP6.04□□□□□ -1.44
PTPRD-202ENST00000356435 STX2P32856 288 aa6.04□□□□□ -1.44
PTPRD-202ENST00000356435 BLIDQ8IZY5 108 aa6.04□□□□□ -1.44
PTPRD-202ENST00000356435 DSCC1Q9BVC3 393 aa6.04□□□□□ -1.44
PTPRD-202ENST00000356435 Q9H521 79 aa6.04□□□□□ -1.44
PTPRD-202ENST00000356435 TYW1Q9NV66 732 aaKnown RBP6.04□□□□□ -1.44
PTPRD-202ENST00000356435 IMPACTQ9P2X3 320 aa6.04□□□□□ -1.44
PTPRD-202ENST00000356435 HNRNPDLO14979 420 aaKnown RBP6.04□□□□□ -1.44
PTPRD-202ENST00000356435 HSPA8P11142 646 aaKnown RBP6.04□□□□□ -1.44
PTPRD-202ENST00000356435 SIX6OS1Q8N1H7 587 aa6.04□□□□□ -1.44
PTPRD-202ENST00000356435 DISC1Q9NRI5 854 aa6.04□□□□□ -1.44
PTPRD-202ENST00000356435 ORC6Q9Y5N6 252 aa6.04□□□□□ -1.44
PTPRD-202ENST00000356435 ATF2P15336 505 aa6.04□□□□□ -1.44
PTPRD-202ENST00000356435 RFC1P35251 1148 aaPredicted RBP6.04□□□□□ -1.44
PTPRD-202ENST00000356435 MFAP3P55082 362 aa6.04□□□□□ -1.44
PTPRD-202ENST00000356435 ARHGAP4P98171 946 aa6.04□□□□□ -1.44
PTPRD-202ENST00000356435 CCDC51Q96ER9 411 aa6.04□□□□□ -1.44
PTPRD-202ENST00000356435 PANK4Q9NVE7 773 aa6.04□□□□□ -1.44
PTPRD-202ENST00000356435 RNF40O75150 1001 aa6.04□□□□□ -1.44
PTPRD-202ENST00000356435 PPFIA2O75334 1257 aa6.04□□□□□ -1.44
PTPRD-202ENST00000356435 PPARGP37231 505 aaPredicted RBP6.04□□□□□ -1.44
PTPRD-202ENST00000356435 ZNF75DP51815 510 aa6.04□□□□□ -1.44
PTPRD-202ENST00000356435 MYL7Q01449 175 aa6.04□□□□□ -1.44
PTPRD-202ENST00000356435 Q3C1V9 767 aa6.04□□□□□ -1.44
PTPRD-202ENST00000356435 RFX6Q8HWS3 928 aa6.04□□□□□ -1.44
PTPRD-202ENST00000356435 FAM178BQ8IXR5 827 aa6.04□□□□□ -1.44
PTPRD-202ENST00000356435 CCDC13Q8IYE1 715 aa6.04□□□□□ -1.44
PTPRD-202ENST00000356435 YY1AP1Q9H869 796 aa6.04□□□□□ -1.44
PTPRD-202ENST00000356435 MAPK8IP1Q9UQF2 711 aa6.04□□□□□ -1.44
PTPRD-202ENST00000356435 IFNB1P01574 187 aa6.04□□□□□ -1.44
PTPRD-202ENST00000356435 CASP2P42575 452 aa6.04□□□□□ -1.44
PTPRD-202ENST00000356435 MAGEA1P43355 309 aa6.04□□□□□ -1.44
PTPRD-202ENST00000356435 STX1BP61266 288 aa6.04□□□□□ -1.44
PTPRD-202ENST00000356435 FANCCQ00597 558 aa6.04□□□□□ -1.44
PTPRD-202ENST00000356435 SLFN13Q68D06 897 aa6.04□□□□□ -1.44
PTPRD-202ENST00000356435 TYW1BQ6NUM6 668 aa6.04□□□□□ -1.44
PTPRD-202ENST00000356435 KIAA0825Q8IV33 1275 aa6.04□□□□□ -1.44
PTPRD-202ENST00000356435 LRGUKQ96M69 825 aa6.04□□□□□ -1.44
PTPRD-202ENST00000356435 ZFYVE16Q7Z3T8 1539 aa6.04□□□□□ -1.44
PTPRD-202ENST00000356435 MLH3Q9UHC1 1453 aa6.04□□□□□ -1.44
PTPRD-202ENST00000356435 AATKQ6ZMQ8 1374 aa6.04□□□□□ -1.44
PTPRD-202ENST00000356435 OR52Z1P0C646 297 aa6.04□□□□□ -1.44
PTPRD-202ENST00000356435 ARHGAP25P42331 645 aa6.04□□□□□ -1.44
PTPRD-202ENST00000356435 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.04□□□□□ -1.44
PTPRD-202ENST00000356435 RNF219Q5W0B1 726 aaPredicted RBP6.04□□□□□ -1.44
PTPRD-202ENST00000356435 RRAGAQ7L523 313 aa6.04□□□□□ -1.44
PTPRD-202ENST00000356435 NEK8Q86SG6 692 aa6.04□□□□□ -1.44
PTPRD-202ENST00000356435 DNAJC10Q8IXB1 793 aa6.04□□□□□ -1.44
PTPRD-202ENST00000356435 FAM71BQ8TC56 605 aa6.04□□□□□ -1.44
PTPRD-202ENST00000356435 MICAL1Q8TDZ2 1067 aa6.04□□□□□ -1.44
PTPRD-202ENST00000356435 DDX27Q96GQ7 796 aaKnown RBP6.04□□□□□ -1.44
PTPRD-202ENST00000356435 CDHR1Q96JP9 859 aa6.04□□□□□ -1.44
PTPRD-202ENST00000356435 METTL14Q9HCE5 456 aaKnown RBP6.04□□□□□ -1.44
PTPRD-202ENST00000356435 TTC4O95801 387 aa6.03□□□□□ -1.44
PTPRD-202ENST00000356435 ARPP19P56211 112 aa6.03□□□□□ -1.44
PTPRD-202ENST00000356435 FAM81BQ96LP2 452 aa6.03□□□□□ -1.44
PTPRD-202ENST00000356435 CDC42BPAQ5VT25 1732 aa6.03□□□□□ -1.44
PTPRD-202ENST00000356435 MED23Q9ULK4 1368 aa6.03□□□□□ -1.44
PTPRD-202ENST00000356435 ELF1P32519 619 aa6.03□□□□□ -1.44
PTPRD-202ENST00000356435 ARMCX5Q6P1M9 558 aa6.03□□□□□ -1.44
PTPRD-202ENST00000356435 CCDC24Q8N4L8 307 aa6.03□□□□□ -1.44
PTPRD-202ENST00000356435 RPGRIP1Q96KN7 1286 aa6.03□□□□□ -1.44
PTPRD-202ENST00000356435 BLZF1Q9H2G9 400 aa6.03□□□□□ -1.44
PTPRD-202ENST00000356435 FAM207AQ9NSI2 230 aaPredicted RBP6.03□□□□□ -1.44
PTPRD-202ENST00000356435 ARMCX3Q9UH62 379 aaPredicted RBP6.03□□□□□ -1.44
PTPRD-202ENST00000356435 SLC13A4Q9UKG4 626 aa6.03□□□□□ -1.44
PTPRD-202ENST00000356435 PCDHA1Q9Y5I3 950 aa6.03□□□□□ -1.44
PTPRD-202ENST00000356435 ARHGAP42A6NI28 874 aa6.03□□□□□ -1.44
PTPRD-202ENST00000356435 KCNJ18B7U540 433 aa6.03□□□□□ -1.44
PTPRD-202ENST00000356435 DPYSL4O14531 572 aa6.03□□□□□ -1.44
PTPRD-202ENST00000356435 TTI1O43156 1089 aa6.03□□□□□ -1.44
PTPRD-202ENST00000356435 MED7O43513 233 aa6.03□□□□□ -1.44
PTPRD-202ENST00000356435 RNF8O76064 485 aa6.03□□□□□ -1.44
PTPRD-202ENST00000356435 GAP43P17677 238 aa6.03□□□□□ -1.44
PTPRD-202ENST00000356435 BFSP1Q12934 665 aa6.03□□□□□ -1.44
PTPRD-202ENST00000356435 KCNJ12Q14500 433 aa6.03□□□□□ -1.44
PTPRD-202ENST00000356435 KRT33BQ14525 404 aa6.03□□□□□ -1.44
PTPRD-202ENST00000356435 TMTC4Q5T4D3 741 aa6.03□□□□□ -1.44
PTPRD-202ENST00000356435 PNMA8AQ86V59 439 aaPredicted RBP6.03□□□□□ -1.44
PTPRD-202ENST00000356435 NCOA5Q9HCD5 579 aaKnown RBP6.03□□□□□ -1.44
PTPRD-202ENST00000356435 CPSF3Q9UKF6 684 aaKnown RBP6.03□□□□□ -1.44
PTPRD-202ENST00000356435 THRAP3Q9Y2W1 955 aaKnown RBP6.03□□□□□ -1.44
PTPRD-202ENST00000356435 STK25O00506 426 aa6.03□□□□□ -1.44
PTPRD-202ENST00000356435 NVLO15381 856 aaKnown RBP6.03□□□□□ -1.44
PTPRD-202ENST00000356435 RGS16O15492 202 aaPredicted RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms