RNA–Protein interactions for RNA: ENST00000356025.7

SIRPA-201, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-201ENST00000356025 VEZTQ9HBM0 779 aa13.54□□□□□ -0.24
SIRPA-201ENST00000356025 BARHL2Q9NY43 387 aa13.54□□□□□ -0.24
SIRPA-201ENST00000356025 PCDHA12Q9UN75 941 aa13.54□□□□□ -0.24
SIRPA-201ENST00000356025 NPHP3-ACAD11A0A0J9YXS1 232 aa13.54□□□□□ -0.24
SIRPA-201ENST00000356025 SFI1A8K8P3 1242 aa13.54□□□□□ -0.24
SIRPA-201ENST00000356025 STAT3P40763 770 aa13.54□□□□□ -0.24
SIRPA-201ENST00000356025 USP8P40818 1118 aa13.54□□□□□ -0.24
SIRPA-201ENST00000356025 TRAPPC10P48553 1259 aa13.54□□□□□ -0.24
SIRPA-201ENST00000356025 CNNM4Q6P4Q7 775 aa13.54□□□□□ -0.24
SIRPA-201ENST00000356025 TMC4Q7Z404 712 aa13.54□□□□□ -0.24
SIRPA-201ENST00000356025 PANX2Q96RD6 677 aa13.54□□□□□ -0.24
SIRPA-201ENST00000356025 TCEAL9Q9UHQ7 104 aa13.54□□□□□ -0.24
SIRPA-201ENST00000356025 LEMD3Q9Y2U8 911 aa13.54□□□□□ -0.24
SIRPA-201ENST00000356025 MRFAP1Q9Y605 127 aa13.54□□□□□ -0.24
SIRPA-201ENST00000356025 TUBB4AP04350 444 aa13.53□□□□□ -0.24
SIRPA-201ENST00000356025 HOXA13P31271 388 aaPredicted RBP13.53□□□□□ -0.24
SIRPA-201ENST00000356025 KRT83P78385 493 aa13.53□□□□□ -0.24
SIRPA-201ENST00000356025 SLC7A5Q01650 507 aa13.53□□□□□ -0.24
SIRPA-201ENST00000356025 PRPF4BQ13523 1007 aaKnown RBP13.53□□□□□ -0.24
SIRPA-201ENST00000356025 GRM4Q14833 912 aa13.53□□□□□ -0.24
SIRPA-201ENST00000356025 NOA1Q8NC60 698 aaKnown RBP13.53□□□□□ -0.24
SIRPA-201ENST00000356025 IFIH1Q9BYX4 1025 aaKnown RBP13.53□□□□□ -0.24
SIRPA-201ENST00000356025 THRAP3Q9Y2W1 955 aaKnown RBP13.53□□□□□ -0.24
SIRPA-201ENST00000356025 E9PMD0 336 aa13.53□□□□□ -0.24
SIRPA-201ENST00000356025 MAGEA1P43355 309 aa13.53□□□□□ -0.24
SIRPA-201ENST00000356025 PABPC4Q13310 644 aaKnown RBP eCLIP13.53□□□□□ -0.24
SIRPA-201ENST00000356025 RBM26Q5T8P6 1007 aaKnown RBP13.53□□□□□ -0.24
SIRPA-201ENST00000356025 TTC19Q6DKK2 380 aaPredicted RBP13.53□□□□□ -0.24
SIRPA-201ENST00000356025 CC2D1AQ6P1N0 951 aaPredicted RBP13.53□□□□□ -0.24
SIRPA-201ENST00000356025 L2HGDHQ9H9P8 463 aa13.53□□□□□ -0.24
SIRPA-201ENST00000356025 DDX25Q9UHL0 483 aaKnown RBP13.53□□□□□ -0.24
SIRPA-201ENST00000356025 BCS1LQ9Y276 419 aa13.53□□□□□ -0.24
SIRPA-201ENST00000356025 PCDHA1Q9Y5I3 950 aa13.53□□□□□ -0.24
SIRPA-201ENST00000356025 SAR1BQ9Y6B6 198 aa13.53□□□□□ -0.24
SIRPA-201ENST00000356025 STXBP3O00186 592 aa13.53□□□□□ -0.24
SIRPA-201ENST00000356025 RASSF7Q02833 373 aa13.53□□□□□ -0.24
SIRPA-201ENST00000356025 C2orf54Q08AI8 447 aa13.53□□□□□ -0.24
SIRPA-201ENST00000356025 DNAAF5Q86Y56 855 aa13.53□□□□□ -0.24
SIRPA-201ENST00000356025 LARP4BQ92615 738 aaKnown RBP13.53□□□□□ -0.24
SIRPA-201ENST00000356025 MLXIPQ9HAP2 919 aa13.53□□□□□ -0.24
SIRPA-201ENST00000356025 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.53□□□□□ -0.24
SIRPA-201ENST00000356025 CFBP00751 764 aa13.52□□□□□ -0.24
SIRPA-201ENST00000356025 DNM2P50570 870 aa13.52□□□□□ -0.24
SIRPA-201ENST00000356025 SF3A3Q12874 501 aaKnown RBP eCLIP13.52□□□□□ -0.24
SIRPA-201ENST00000356025 SEPT12Q8IYM1 358 aa13.52□□□□□ -0.24
SIRPA-201ENST00000356025 FAM107BQ9H098 131 aa13.52□□□□□ -0.24
SIRPA-201ENST00000356025 ACBD3Q9H3P7 528 aa13.52□□□□□ -0.24
SIRPA-201ENST00000356025 NHEJ1Q9H9Q4 299 aaPredicted RBP13.52□□□□□ -0.24
SIRPA-201ENST00000356025 FANCGO15287 622 aa13.52□□□□□ -0.25
SIRPA-201ENST00000356025 MOCS3O95396 460 aa13.52□□□□□ -0.25
SIRPA-201ENST00000356025 MRPL12P52815 198 aaKnown RBP13.52□□□□□ -0.25
SIRPA-201ENST00000356025 HLTFQ14527 1009 aaKnown RBP eCLIP13.52□□□□□ -0.25
SIRPA-201ENST00000356025 PDXDC2PQ6P474 469 aa13.52□□□□□ -0.25
SIRPA-201ENST00000356025 CCDC174Q6PII3 467 aa13.52□□□□□ -0.25
SIRPA-201ENST00000356025 NAA15Q9BXJ9 866 aaKnown RBP13.52□□□□□ -0.25
SIRPA-201ENST00000356025 SERPINB13Q9UIV8 391 aa13.52□□□□□ -0.25
SIRPA-201ENST00000356025 ATP1A1P05023 1023 aaKnown RBP13.52□□□□□ -0.25
SIRPA-201ENST00000356025 PAFAH1B1P43034 410 aa13.52□□□□□ -0.25
SIRPA-201ENST00000356025 POLR2FP61218 127 aaKnown RBP13.52□□□□□ -0.25
SIRPA-201ENST00000356025 MAP3K9P80192 1104 aa13.52□□□□□ -0.25
SIRPA-201ENST00000356025 GPBP1Q86WP2 473 aa13.52□□□□□ -0.25
SIRPA-201ENST00000356025 RSPH14Q9UHP6 348 aa13.52□□□□□ -0.25
SIRPA-201ENST00000356025 FLT1P17948 1338 aa13.52□□□□□ -0.25
SIRPA-201ENST00000356025 NCK2O43639 380 aa13.51□□□□□ -0.25
SIRPA-201ENST00000356025 TACC1O75410 805 aa13.51□□□□□ -0.25
SIRPA-201ENST00000356025 PCP11498 1178 aaKnown RBP13.51□□□□□ -0.25
SIRPA-201ENST00000356025 APBA1Q02410 837 aa13.51□□□□□ -0.25
SIRPA-201ENST00000356025 GLIS3Q8NEA6 775 aa13.51□□□□□ -0.25
SIRPA-201ENST00000356025 RABGGTAQ92696 567 aa13.51□□□□□ -0.25
SIRPA-201ENST00000356025 SECISBP2LQ93073 1101 aaKnown RBP13.51□□□□□ -0.25
SIRPA-201ENST00000356025 POLLQ9UGP5 575 aa13.51□□□□□ -0.25
SIRPA-201ENST00000356025 SAMM50Q9Y512 469 aa13.51□□□□□ -0.25
SIRPA-201ENST00000356025 CLRN2A0PK11 232 aa13.51□□□□□ -0.25
SIRPA-201ENST00000356025 SPDYE3A6NKU9 549 aa13.51□□□□□ -0.25
SIRPA-201ENST00000356025 N4BP1O75113 896 aaKnown RBP13.51□□□□□ -0.25
SIRPA-201ENST00000356025 DDX12PQ92771 950 aa13.51□□□□□ -0.25
SIRPA-201ENST00000356025 EHD2Q9NZN4 543 aa13.51□□□□□ -0.25
SIRPA-201ENST00000356025 PCDHB13Q9Y5F0 798 aa13.51□□□□□ -0.25
SIRPA-201ENST00000356025 PCDHAC2Q9Y5I4 1007 aa13.51□□□□□ -0.25
SIRPA-201ENST00000356025 SLC37A4O43826 429 aa13.51□□□□□ -0.25
SIRPA-201ENST00000356025 ATP2B4P23634 1241 aa13.51□□□□□ -0.25
SIRPA-201ENST00000356025 EIF4A3P38919 411 aaKnown RBP13.51□□□□□ -0.25
SIRPA-201ENST00000356025 PLA2G4AP47712 749 aa13.51□□□□□ -0.25
SIRPA-201ENST00000356025 VSNL1P62760 191 aa13.51□□□□□ -0.25
SIRPA-201ENST00000356025 SHROOM1Q2M3G4 852 aaPredicted RBP13.51□□□□□ -0.25
SIRPA-201ENST00000356025 TMEM139Q8IV31 216 aa13.51□□□□□ -0.25
SIRPA-201ENST00000356025 ADSSL1Q8N142 457 aa13.51□□□□□ -0.25
SIRPA-201ENST00000356025 PROCA1Q8NCQ7 364 aaPredicted RBP13.51□□□□□ -0.25
SIRPA-201ENST00000356025 NUDT12Q9BQG2 462 aa13.51□□□□□ -0.25
SIRPA-201ENST00000356025 TRIM9Q9C026 710 aa13.51□□□□□ -0.25
SIRPA-201ENST00000356025 KCNQ5Q9NR82 932 aa13.51□□□□□ -0.25
SIRPA-201ENST00000356025 FAN1Q9Y2M0 1017 aa13.51□□□□□ -0.25
SIRPA-201ENST00000356025 CTDP1Q9Y5B0 961 aaPredicted RBP13.51□□□□□ -0.25
SIRPA-201ENST00000356025 SP4Q02446 784 aa13.5□□□□□ -0.25
SIRPA-201ENST00000356025 LLGL1Q15334 1064 aa13.5□□□□□ -0.25
SIRPA-201ENST00000356025 ARL6IP4Q66PJ3 421 aaKnown RBP13.5□□□□□ -0.25
SIRPA-201ENST00000356025 HDXQ7Z353 690 aa13.5□□□□□ -0.25
SIRPA-201ENST00000356025 TUBGCP6Q96RT7 1819 aa13.5□□□□□ -0.25
SIRPA-201ENST00000356025 CCNE1P24864 410 aa13.5□□□□□ -0.25
SIRPA-201ENST00000356025 NPY5RQ15761 445 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms