RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 FAM47CQ5HY64 1035 aa16.21■□□□□ 0.19
LMX1B-201ENST00000355497 NIM1KQ8IY84 436 aa16.21■□□□□ 0.19
LMX1B-201ENST00000355497 PPWD1Q96BP3 646 aaKnown RBP16.21■□□□□ 0.19
LMX1B-201ENST00000355497 RTEL1Q9NZ71 1219 aa16.21■□□□□ 0.19
LMX1B-201ENST00000355497 FAM8A1Q9UBU6 413 aa16.21■□□□□ 0.19
LMX1B-201ENST00000355497 LONP1P36776 959 aaKnown RBP16.21■□□□□ 0.18
LMX1B-201ENST00000355497 COPB1P53618 953 aaKnown RBP16.21■□□□□ 0.18
LMX1B-201ENST00000355497 BPIFB4P59827 614 aa16.21■□□□□ 0.18
LMX1B-201ENST00000355497 ESRRGP62508 458 aa16.21■□□□□ 0.18
LMX1B-201ENST00000355497 SCYL3Q8IZE3 742 aa16.21■□□□□ 0.18
LMX1B-201ENST00000355497 USP28Q96RU2 1077 aa16.21■□□□□ 0.18
LMX1B-201ENST00000355497 EIF2AQ9BY44 585 aaKnown RBP16.21■□□□□ 0.18
LMX1B-201ENST00000355497 PTK2Q05397 1052 aa16.2■□□□□ 0.18
LMX1B-201ENST00000355497 ZNF827Q17R98 1081 aa16.2■□□□□ 0.18
LMX1B-201ENST00000355497 CCDC124Q96CT7 223 aaKnown RBP16.2■□□□□ 0.18
LMX1B-201ENST00000355497 TRIM11Q96F44 468 aa16.2■□□□□ 0.18
LMX1B-201ENST00000355497 ALAS1P13196 640 aa16.2■□□□□ 0.18
LMX1B-201ENST00000355497 DDAH1O94760 285 aa16.2■□□□□ 0.18
LMX1B-201ENST00000355497 IFNAR2P48551 515 aa16.2■□□□□ 0.18
LMX1B-201ENST00000355497 IFT88Q13099 833 aa16.2■□□□□ 0.18
LMX1B-201ENST00000355497 IQCB1Q15051 598 aa16.2■□□□□ 0.18
LMX1B-201ENST00000355497 SCG2P13521 617 aa16.2■□□□□ 0.18
LMX1B-201ENST00000355497 PPP1R13BQ96KQ4 1090 aa16.2■□□□□ 0.18
LMX1B-201ENST00000355497 MAGEF1Q9HAY2 307 aa16.2■□□□□ 0.18
LMX1B-201ENST00000355497 TLR3O15455 904 aaKnown RBP16.2■□□□□ 0.18
LMX1B-201ENST00000355497 POLGP54098 1239 aaPredicted RBP16.2■□□□□ 0.18
LMX1B-201ENST00000355497 MESDQ14696 234 aa16.2■□□□□ 0.18
LMX1B-201ENST00000355497 KRT26Q7Z3Y9 468 aa16.2■□□□□ 0.18
LMX1B-201ENST00000355497 BBS5Q8N3I7 341 aa16.2■□□□□ 0.18
LMX1B-201ENST00000355497 RABGGTAQ92696 567 aa16.2■□□□□ 0.18
LMX1B-201ENST00000355497 SYMPKQ92797 1274 aaKnown RBP16.2■□□□□ 0.18
LMX1B-201ENST00000355497 ATP6V1E2Q96A05 226 aa16.2■□□□□ 0.18
LMX1B-201ENST00000355497 CCDC127Q96BQ5 260 aa16.2■□□□□ 0.18
LMX1B-201ENST00000355497 CNOT6LQ96LI5 555 aaKnown RBP16.2■□□□□ 0.18
LMX1B-201ENST00000355497 C19orf44Q9H6X5 657 aa16.2■□□□□ 0.18
LMX1B-201ENST00000355497 CDC25BP30305 580 aa16.19■□□□□ 0.18
LMX1B-201ENST00000355497 FAM26FQ5R3K3 315 aa16.19■□□□□ 0.18
LMX1B-201ENST00000355497 FANCBQ8NB91 859 aa16.19■□□□□ 0.18
LMX1B-201ENST00000355497 PAGR1Q9BTK6 254 aa16.19■□□□□ 0.18
LMX1B-201ENST00000355497 DISC1Q9NRI5 854 aa16.19■□□□□ 0.18
LMX1B-201ENST00000355497 GRIN2AQ12879 1464 aa16.19■□□□□ 0.18
LMX1B-201ENST00000355497 EPHB4P54760 987 aa16.19■□□□□ 0.18
LMX1B-201ENST00000355497 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.19■□□□□ 0.18
LMX1B-201ENST00000355497 FBXO41Q8TF61 875 aa16.19■□□□□ 0.18
LMX1B-201ENST00000355497 EFHD1Q9BUP0 239 aa16.19■□□□□ 0.18
LMX1B-201ENST00000355497 PCDHB4Q9Y5E5 795 aa16.19■□□□□ 0.18
LMX1B-201ENST00000355497 BICRAQ9NZM4 1560 aa16.19■□□□□ 0.18
LMX1B-201ENST00000355497 CPP00450 1065 aa16.19■□□□□ 0.18
LMX1B-201ENST00000355497 FBXO11Q86XK2 927 aa16.19■□□□□ 0.18
LMX1B-201ENST00000355497 PLA2G4DQ86XP0 818 aa16.19■□□□□ 0.18
LMX1B-201ENST00000355497 IFNL3Q8IZI9 196 aa16.19■□□□□ 0.18
LMX1B-201ENST00000355497 CCDC138Q96M89 665 aa16.19■□□□□ 0.18
LMX1B-201ENST00000355497 SPATS2LQ9NUQ6 558 aaKnown RBP16.19■□□□□ 0.18
LMX1B-201ENST00000355497 FAM160B1Q5W0V3 765 aa16.19■□□□□ 0.18
LMX1B-201ENST00000355497 NRBP2Q9NSY0 501 aa16.19■□□□□ 0.18
LMX1B-201ENST00000355497 A1BGP04217 495 aa16.18■□□□□ 0.18
LMX1B-201ENST00000355497 RPSAP08865 295 aaKnown RBP16.18■□□□□ 0.18
LMX1B-201ENST00000355497 HSPA8P11142 646 aaKnown RBP16.18■□□□□ 0.18
LMX1B-201ENST00000355497 TMED2Q15363 201 aa16.18■□□□□ 0.18
LMX1B-201ENST00000355497 NOP9Q86U38 636 aaKnown RBP16.18■□□□□ 0.18
LMX1B-201ENST00000355497 MAGOHBQ96A72 148 aaKnown RBP16.18■□□□□ 0.18
LMX1B-201ENST00000355497 CDC23Q9UJX2 597 aa16.18■□□□□ 0.18
LMX1B-201ENST00000355497 THRAP3Q9Y2W1 955 aaKnown RBP16.18■□□□□ 0.18
LMX1B-201ENST00000355497 USP17L12C9JPN9 530 aa16.18■□□□□ 0.18
LMX1B-201ENST00000355497 USP17L21D6R901 530 aa16.18■□□□□ 0.18
LMX1B-201ENST00000355497 NVLO15381 856 aaKnown RBP16.18■□□□□ 0.18
LMX1B-201ENST00000355497 ALDH1B1P30837 517 aa16.18■□□□□ 0.18
LMX1B-201ENST00000355497 MSH2P43246 934 aa16.18■□□□□ 0.18
LMX1B-201ENST00000355497 ANKRD35Q8N283 1001 aa16.18■□□□□ 0.18
LMX1B-201ENST00000355497 GPKOWQ92917 476 aaPredicted RBP eCLIP16.18■□□□□ 0.18
LMX1B-201ENST00000355497 MYO1FO00160 1098 aa16.18■□□□□ 0.18
LMX1B-201ENST00000355497 TTI1O43156 1089 aa16.18■□□□□ 0.18
LMX1B-201ENST00000355497 ATP6V1E1P36543 226 aa16.18■□□□□ 0.18
LMX1B-201ENST00000355497 ARHGEF18Q6ZSZ5 1173 aa16.18■□□□□ 0.18
LMX1B-201ENST00000355497 BANK1Q8NDB2 785 aa16.18■□□□□ 0.18
LMX1B-201ENST00000355497 SLC17A8Q8NDX2 589 aa16.18■□□□□ 0.18
LMX1B-201ENST00000355497 SUGCTQ9HAC7 445 aa16.18■□□□□ 0.18
LMX1B-201ENST00000355497 PCDHA7Q9UN72 937 aa16.18■□□□□ 0.18
LMX1B-201ENST00000355497 CSADQ9Y600 493 aa16.18■□□□□ 0.18
LMX1B-201ENST00000355497 KIF24Q5T7B8 1368 aa16.18■□□□□ 0.18
LMX1B-201ENST00000355497 MED23Q9ULK4 1368 aa16.18■□□□□ 0.18
LMX1B-201ENST00000355497 TUBB6Q9BUF5 446 aa16.18■□□□□ 0.18
LMX1B-201ENST00000355497 CCPG1Q9ULG6 757 aa16.18■□□□□ 0.18
LMX1B-201ENST00000355497 LRRIQ4A6NIV6 560 aa16.18■□□□□ 0.18
LMX1B-201ENST00000355497 ATP8B1O43520 1251 aa16.18■□□□□ 0.18
LMX1B-201ENST00000355497 NDUFA8P51970 172 aa16.18■□□□□ 0.18
LMX1B-201ENST00000355497 CLIC6Q96NY7 704 aa16.18■□□□□ 0.18
LMX1B-201ENST00000355497 NT5C1BQ96P26 610 aa16.18■□□□□ 0.18
LMX1B-201ENST00000355497 ZMYM4Q5VZL5 1548 aa16.17■□□□□ 0.18
LMX1B-201ENST00000355497 PTPREP23469 700 aa16.17■□□□□ 0.18
LMX1B-201ENST00000355497 CASP14P31944 242 aa16.17■□□□□ 0.18
LMX1B-201ENST00000355497 TFDP1Q14186 410 aa16.17■□□□□ 0.18
LMX1B-201ENST00000355497 HP1BP3Q5SSJ5 553 aaPredicted RBP16.17■□□□□ 0.18
LMX1B-201ENST00000355497 EFCAB13Q8IY85 973 aa16.17■□□□□ 0.18
LMX1B-201ENST00000355497 HINFPQ9BQA5 517 aa16.17■□□□□ 0.18
LMX1B-201ENST00000355497 ACTN1P12814 892 aa16.17■□□□□ 0.18
LMX1B-201ENST00000355497 KPNA2P52292 529 aaKnown RBP16.17■□□□□ 0.18
LMX1B-201ENST00000355497 TMOD1P28289 359 aa16.17■□□□□ 0.18
LMX1B-201ENST00000355497 MYLK4Q86YV6 388 aaPredicted RBP16.17■□□□□ 0.18
LMX1B-201ENST00000355497 PNMA1Q8ND90 353 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms