RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 JADE1Q6IE81 842 aa13.84□□□□□ -0.19
SYNCRIP-201ENST00000355238 TTLL7Q6ZT98 887 aa13.84□□□□□ -0.19
SYNCRIP-201ENST00000355238 ARHGEF25Q86VW2 580 aa13.84□□□□□ -0.19
SYNCRIP-201ENST00000355238 ELAC2Q9BQ52 826 aaKnown RBP13.84□□□□□ -0.19
SYNCRIP-201ENST00000355238 USP44Q9H0E7 712 aa13.84□□□□□ -0.19
SYNCRIP-201ENST00000355238 PKD2L1Q9P0L9 805 aa13.84□□□□□ -0.19
SYNCRIP-201ENST00000355238 FANCAO15360 1455 aa13.83□□□□□ -0.19
SYNCRIP-201ENST00000355238 CCDC188H7C350 402 aa13.83□□□□□ -0.19
SYNCRIP-201ENST00000355238 SEMA3EO15041 775 aa13.83□□□□□ -0.19
SYNCRIP-201ENST00000355238 SLFN14P0C7P3 912 aa13.83□□□□□ -0.19
SYNCRIP-201ENST00000355238 SIRT1Q96EB6 747 aa13.83□□□□□ -0.19
SYNCRIP-201ENST00000355238 HAUS2Q9NVX0 235 aa13.83□□□□□ -0.19
SYNCRIP-201ENST00000355238 PCDHA13Q9Y5I0 950 aa13.83□□□□□ -0.19
SYNCRIP-201ENST00000355238 GMNCA6NCL1 334 aa13.83□□□□□ -0.2
SYNCRIP-201ENST00000355238 CYP2J2P51589 502 aa13.83□□□□□ -0.2
SYNCRIP-201ENST00000355238 PPWD1Q96BP3 646 aaKnown RBP13.83□□□□□ -0.2
SYNCRIP-201ENST00000355238 ANAPC5Q9UJX4 755 aa13.83□□□□□ -0.2
SYNCRIP-201ENST00000355238 TRPC6Q9Y210 931 aa13.83□□□□□ -0.2
SYNCRIP-201ENST00000355238 ANO9A1A5B4 782 aa13.83□□□□□ -0.2
SYNCRIP-201ENST00000355238 PDE8AO60658 829 aa13.83□□□□□ -0.2
SYNCRIP-201ENST00000355238 GPC4O75487 556 aa13.83□□□□□ -0.2
SYNCRIP-201ENST00000355238 MMEP08473 750 aa13.83□□□□□ -0.2
SYNCRIP-201ENST00000355238 SCG2P13521 617 aa13.83□□□□□ -0.2
SYNCRIP-201ENST00000355238 CXCR5P32302 372 aa13.83□□□□□ -0.2
SYNCRIP-201ENST00000355238 YWHAGP61981 247 aaKnown RBP eCLIP13.83□□□□□ -0.2
SYNCRIP-201ENST00000355238 TTLL12Q14166 644 aaPredicted RBP13.83□□□□□ -0.2
SYNCRIP-201ENST00000355238 KRT81Q14533 505 aa13.83□□□□□ -0.2
SYNCRIP-201ENST00000355238 NUGGCQ68CJ6 796 aa13.83□□□□□ -0.2
SYNCRIP-201ENST00000355238 ZNF790Q6PG37 636 aa13.83□□□□□ -0.2
SYNCRIP-201ENST00000355238 NEK8Q86SG6 692 aa13.83□□□□□ -0.2
SYNCRIP-201ENST00000355238 DACT3Q96B18 629 aaPredicted RBP13.83□□□□□ -0.2
SYNCRIP-201ENST00000355238 ZSCAN10Q96SZ4 725 aaPredicted RBP13.83□□□□□ -0.2
SYNCRIP-201ENST00000355238 BATF3Q9NR55 127 aa13.83□□□□□ -0.2
SYNCRIP-201ENST00000355238 NFU1Q9UMS0 254 aa13.83□□□□□ -0.2
SYNCRIP-201ENST00000355238 BIVM-ERCC5R4GMW8 1640 aa13.83□□□□□ -0.2
SYNCRIP-201ENST00000355238 EDC4Q6P2E9 1401 aaKnown RBP13.83□□□□□ -0.2
SYNCRIP-201ENST00000355238 SPAG7O75391 227 aa13.83□□□□□ -0.2
SYNCRIP-201ENST00000355238 STAM2O75886 525 aa13.83□□□□□ -0.2
SYNCRIP-201ENST00000355238 TRIML2Q8N7C3 387 aa13.83□□□□□ -0.2
SYNCRIP-201ENST00000355238 DTNBP1Q96EV8 351 aa13.83□□□□□ -0.2
SYNCRIP-201ENST00000355238 KLC4Q9NSK0 619 aa13.83□□□□□ -0.2
SYNCRIP-201ENST00000355238 MAP3K19Q56UN5 1328 aa13.83□□□□□ -0.2
SYNCRIP-201ENST00000355238 LOC102724159A0A0B4J2E5 919 aa13.83□□□□□ -0.2
SYNCRIP-201ENST00000355238 TAF5LO75529 589 aa13.83□□□□□ -0.2
SYNCRIP-201ENST00000355238 MSH2P43246 934 aa13.83□□□□□ -0.2
SYNCRIP-201ENST00000355238 RESTQ13127 1097 aa13.83□□□□□ -0.2
SYNCRIP-201ENST00000355238 PWP2Q15269 919 aaKnown RBP13.83□□□□□ -0.2
SYNCRIP-201ENST00000355238 RBM26Q5T8P6 1007 aaKnown RBP13.83□□□□□ -0.2
SYNCRIP-201ENST00000355238 TPTE2Q6XPS3 522 aa13.83□□□□□ -0.2
SYNCRIP-201ENST00000355238 CFAP43Q8NDM7 1665 aa13.82□□□□□ -0.2
SYNCRIP-201ENST00000355238 EEF1DP29692 281 aaKnown RBP13.82□□□□□ -0.2
SYNCRIP-201ENST00000355238 SLC7A5Q01650 507 aa13.82□□□□□ -0.2
SYNCRIP-201ENST00000355238 BSPRYQ5W0U4 402 aa13.82□□□□□ -0.2
SYNCRIP-201ENST00000355238 CLEC17AQ6ZS10 378 aa13.82□□□□□ -0.2
SYNCRIP-201ENST00000355238 LRRC59Q96AG4 307 aaKnown RBP13.82□□□□□ -0.2
SYNCRIP-201ENST00000355238 SCYL1Q96KG9 808 aa13.82□□□□□ -0.2
SYNCRIP-201ENST00000355238 CCDC138Q96M89 665 aa13.82□□□□□ -0.2
SYNCRIP-201ENST00000355238 OLFM3Q96PB7 478 aa13.82□□□□□ -0.2
SYNCRIP-201ENST00000355238 BPIFA3Q9BQP9 254 aa13.82□□□□□ -0.2
SYNCRIP-201ENST00000355238 DDAH1O94760 285 aa13.82□□□□□ -0.2
SYNCRIP-201ENST00000355238 PPP2R5CQ13362 524 aa13.82□□□□□ -0.2
SYNCRIP-201ENST00000355238 ZNF449Q6P9G9 518 aa13.82□□□□□ -0.2
SYNCRIP-201ENST00000355238 PIP4K2CQ8TBX8 421 aa13.82□□□□□ -0.2
SYNCRIP-201ENST00000355238 TRIM11Q96F44 468 aa13.82□□□□□ -0.2
SYNCRIP-201ENST00000355238 RASSF10A6NK89 507 aa13.82□□□□□ -0.2
SYNCRIP-201ENST00000355238 HIBADHP31937 336 aaKnown RBP13.82□□□□□ -0.2
SYNCRIP-201ENST00000355238 SGO2Q562F6 1265 aa13.82□□□□□ -0.2
SYNCRIP-201ENST00000355238 RSBN1LQ6PCB5 846 aaPredicted RBP13.82□□□□□ -0.2
SYNCRIP-201ENST00000355238 NSMCE1Q8WV22 266 aa13.82□□□□□ -0.2
SYNCRIP-201ENST00000355238 EAF2Q96CJ1 260 aaPredicted RBP13.82□□□□□ -0.2
SYNCRIP-201ENST00000355238 FAM89AQ96GI7 184 aa13.82□□□□□ -0.2
SYNCRIP-201ENST00000355238 ZNF594Q96JF6 807 aaPredicted RBP13.82□□□□□ -0.2
SYNCRIP-201ENST00000355238 PHF23Q9BUL5 403 aaPredicted RBP13.82□□□□□ -0.2
SYNCRIP-201ENST00000355238 C1orf112Q9NSG2 853 aa13.82□□□□□ -0.2
SYNCRIP-201ENST00000355238 SAMSN1Q9NSI8 373 aaKnown RBP13.82□□□□□ -0.2
SYNCRIP-201ENST00000355238 MROH5Q6ZUA9 1318 aa13.82□□□□□ -0.2
SYNCRIP-201ENST00000355238 WDR46O15213 610 aaKnown RBP13.82□□□□□ -0.2
SYNCRIP-201ENST00000355238 SERPING1P05155 500 aa13.82□□□□□ -0.2
SYNCRIP-201ENST00000355238 GRAMD4Q6IC98 578 aa13.82□□□□□ -0.2
SYNCRIP-201ENST00000355238 RDH13Q8NBN7 331 aa13.82□□□□□ -0.2
SYNCRIP-201ENST00000355238 TMEM60Q9H2L4 133 aa13.82□□□□□ -0.2
SYNCRIP-201ENST00000355238 ARPP21Q9UBL0 812 aaPredicted RBP13.82□□□□□ -0.2
SYNCRIP-201ENST00000355238 COL4A3BPQ9Y5P4 624 aa13.82□□□□□ -0.2
SYNCRIP-201ENST00000355238 ABCC12Q96J65 1359 aa13.82□□□□□ -0.2
SYNCRIP-201ENST00000355238 TNNI1P19237 187 aa13.82□□□□□ -0.2
SYNCRIP-201ENST00000355238 MESDQ14696 234 aa13.82□□□□□ -0.2
SYNCRIP-201ENST00000355238 SLFN12Q8IYM2 578 aa13.82□□□□□ -0.2
SYNCRIP-201ENST00000355238 AK8Q96MA6 479 aa13.82□□□□□ -0.2
SYNCRIP-201ENST00000355238 CXorf56Q9H5V9 222 aa13.82□□□□□ -0.2
SYNCRIP-201ENST00000355238 SUFUQ9UMX1 484 aa13.82□□□□□ -0.2
SYNCRIP-201ENST00000355238 SHANK2Q9UPX8 1470 aa13.81□□□□□ -0.2
SYNCRIP-201ENST00000355238 FTCDO95954 541 aa13.81□□□□□ -0.2
SYNCRIP-201ENST00000355238 DR1Q01658 176 aa13.81□□□□□ -0.2
SYNCRIP-201ENST00000355238 ACTN3Q08043 901 aaPredicted RBP13.81□□□□□ -0.2
SYNCRIP-201ENST00000355238 CHRNA2Q15822 529 aa13.81□□□□□ -0.2
SYNCRIP-201ENST00000355238 MAEAQ7L5Y9 396 aa13.81□□□□□ -0.2
SYNCRIP-201ENST00000355238 CEP70Q8NHQ1 597 aa13.81□□□□□ -0.2
SYNCRIP-201ENST00000355238 IP6K1Q92551 441 aa13.81□□□□□ -0.2
SYNCRIP-201ENST00000355238 EDC3Q96F86 508 aaKnown RBP13.81□□□□□ -0.2
SYNCRIP-201ENST00000355238 MIS12Q9H081 205 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms