RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 PLEKP08567 350 aaPredicted RBP14.62□□□□□ -0.07
IFT88-202ENST00000351808 PARP1P09874 1014 aaKnown RBP14.62□□□□□ -0.07
IFT88-202ENST00000351808 CTNNA1P35221 906 aaKnown RBP14.62□□□□□ -0.07
IFT88-202ENST00000351808 PAK1Q13153 545 aa14.62□□□□□ -0.07
IFT88-202ENST00000351808 SPA17Q15506 151 aa14.62□□□□□ -0.07
IFT88-202ENST00000351808 SH3RF1Q7Z6J0 888 aa14.62□□□□□ -0.07
IFT88-202ENST00000351808 TXNDC2Q86VQ3 553 aa14.62□□□□□ -0.07
IFT88-202ENST00000351808 NLRP3Q96P20 1036 aa14.62□□□□□ -0.07
IFT88-202ENST00000351808 C3P01024 1663 aa14.62□□□□□ -0.07
IFT88-202ENST00000351808 LRRC37A3O60309 1634 aa14.61□□□□□ -0.07
IFT88-202ENST00000351808 RANBP6O60518 1105 aaKnown RBP14.61□□□□□ -0.07
IFT88-202ENST00000351808 USO1O60763 962 aaKnown RBP14.61□□□□□ -0.07
IFT88-202ENST00000351808 FGAP02671 866 aa14.61□□□□□ -0.07
IFT88-202ENST00000351808 KLK7P49862 253 aa14.61□□□□□ -0.07
IFT88-202ENST00000351808 RNASE9P60153 205 aaKnown RBP14.61□□□□□ -0.07
IFT88-202ENST00000351808 UAP1Q16222 522 aaPredicted RBP14.61□□□□□ -0.07
IFT88-202ENST00000351808 LRRC23Q53EV4 343 aaPredicted RBP14.61□□□□□ -0.07
IFT88-202ENST00000351808 ANO7Q6IWH7 933 aa14.61□□□□□ -0.07
IFT88-202ENST00000351808 DIS3L2Q8IYB7 885 aaKnown RBP14.61□□□□□ -0.07
IFT88-202ENST00000351808 CCDC170Q8IYT3 715 aa14.61□□□□□ -0.07
IFT88-202ENST00000351808 ANKRD13CQ8N6S4 541 aa14.61□□□□□ -0.07
IFT88-202ENST00000351808 ZFAND2BQ8WV99 257 aa14.61□□□□□ -0.07
IFT88-202ENST00000351808 LTV1Q96GA3 475 aaPredicted RBP14.61□□□□□ -0.07
IFT88-202ENST00000351808 NEUROD6Q96NK8 337 aa14.61□□□□□ -0.07
IFT88-202ENST00000351808 SH2D4AQ9H788 454 aa14.61□□□□□ -0.07
IFT88-202ENST00000351808 RWDD2AQ9UIY3 292 aa14.61□□□□□ -0.07
IFT88-202ENST00000351808 GGT7Q9UJ14 662 aa14.61□□□□□ -0.07
IFT88-202ENST00000351808 NUTM2BA6NNL0 878 aaPredicted RBP14.61□□□□□ -0.07
IFT88-202ENST00000351808 NUTM2EB1AL46 878 aaPredicted RBP14.61□□□□□ -0.07
IFT88-202ENST00000351808 CTNND1O60716 968 aaKnown RBP14.61□□□□□ -0.07
IFT88-202ENST00000351808 ATP2A2P16615 1042 aaKnown RBP14.61□□□□□ -0.07
IFT88-202ENST00000351808 TRIM21P19474 475 aaKnown RBP14.61□□□□□ -0.07
IFT88-202ENST00000351808 LRIG3Q6UXM1 1119 aa14.61□□□□□ -0.07
IFT88-202ENST00000351808 IRF2BP1Q8IU81 584 aa14.61□□□□□ -0.07
IFT88-202ENST00000351808 USHBP1Q8N6Y0 703 aa14.61□□□□□ -0.07
IFT88-202ENST00000351808 NKX2-3Q8TAU0 364 aa14.61□□□□□ -0.07
IFT88-202ENST00000351808 OSBP2Q969R2 916 aa14.61□□□□□ -0.07
IFT88-202ENST00000351808 MYL10Q9BUA6 226 aa14.61□□□□□ -0.07
IFT88-202ENST00000351808 TLR10Q9BXR5 811 aa14.61□□□□□ -0.07
IFT88-202ENST00000351808 LGR6Q9HBX8 967 aa14.61□□□□□ -0.07
IFT88-202ENST00000351808 STRN4Q9NRL3 753 aa14.61□□□□□ -0.07
IFT88-202ENST00000351808 STK38LQ9Y2H1 464 aa14.61□□□□□ -0.07
IFT88-202ENST00000351808 PRR36Q9H6K5 1346 aa14.61□□□□□ -0.07
IFT88-202ENST00000351808 LGR5O75473 907 aa14.6□□□□□ -0.07
IFT88-202ENST00000351808 PDHA1P08559 390 aa14.6□□□□□ -0.07
IFT88-202ENST00000351808 NR5A1Q13285 461 aa14.6□□□□□ -0.07
IFT88-202ENST00000351808 BIRC3Q13489 604 aa14.6□□□□□ -0.07
IFT88-202ENST00000351808 CUL3Q13618 768 aa14.6□□□□□ -0.07
IFT88-202ENST00000351808 CFAP221Q4G0U5 840 aa14.6□□□□□ -0.07
IFT88-202ENST00000351808 RUFY4Q6ZNE9 571 aa14.6□□□□□ -0.07
IFT88-202ENST00000351808 GPIHBP1Q8IV16 184 aa14.6□□□□□ -0.07
IFT88-202ENST00000351808 KIF2BQ8N4N8 673 aa14.6□□□□□ -0.07
IFT88-202ENST00000351808 CNBD1Q8NA66 436 aa14.6□□□□□ -0.07
IFT88-202ENST00000351808 CCDC42Q96M95 316 aa14.6□□□□□ -0.07
IFT88-202ENST00000351808 SLC26A6Q9BXS9 759 aa14.6□□□□□ -0.07
IFT88-202ENST00000351808 IFIH1Q9BYX4 1025 aaKnown RBP14.6□□□□□ -0.07
IFT88-202ENST00000351808 TRIM4Q9C037 500 aa14.6□□□□□ -0.07
IFT88-202ENST00000351808 MON2Q7Z3U7 1717 aa14.6□□□□□ -0.07
IFT88-202ENST00000351808 LGALS16A8MUM7 142 aa14.6□□□□□ -0.07
IFT88-202ENST00000351808 IGF2BP3O00425 579 aaKnown RBP eCLIP14.6□□□□□ -0.07
IFT88-202ENST00000351808 MTA1Q13330 715 aa14.6□□□□□ -0.07
IFT88-202ENST00000351808 KCTD19Q17RG1 926 aaPredicted RBP14.6□□□□□ -0.07
IFT88-202ENST00000351808 TRPM8Q7Z2W7 1104 aa14.6□□□□□ -0.07
IFT88-202ENST00000351808 XPO6Q96QU8 1125 aaKnown RBP14.6□□□□□ -0.07
IFT88-202ENST00000351808 SYT15Q9BQS2 421 aa14.6□□□□□ -0.07
IFT88-202ENST00000351808 ABCF3Q9NUQ8 709 aa14.6□□□□□ -0.07
IFT88-202ENST00000351808 TRIM49BA6NDI0 452 aa14.59□□□□□ -0.07
IFT88-202ENST00000351808 FOXP2O15409 715 aa14.59□□□□□ -0.07
IFT88-202ENST00000351808 RNF113AO15541 343 aaKnown RBP14.59□□□□□ -0.07
IFT88-202ENST00000351808 MAGEA8P43361 318 aa14.59□□□□□ -0.07
IFT88-202ENST00000351808 SCNN1BP51168 640 aa14.59□□□□□ -0.07
IFT88-202ENST00000351808 PTPN12Q05209 780 aaKnown RBP14.59□□□□□ -0.07
IFT88-202ENST00000351808 TEX9Q8N6V9 391 aa14.59□□□□□ -0.07
IFT88-202ENST00000351808 ZNF507Q8TCN5 953 aa14.59□□□□□ -0.07
IFT88-202ENST00000351808 ELAC2Q9BQ52 826 aaKnown RBP14.59□□□□□ -0.07
IFT88-202ENST00000351808 WDR35Q9P2L0 1181 aa14.59□□□□□ -0.07
IFT88-202ENST00000351808 PCDHA13Q9Y5I0 950 aa14.59□□□□□ -0.07
IFT88-202ENST00000351808 UTYO14607 1347 aa14.59□□□□□ -0.07
IFT88-202ENST00000351808 ZSCAN9O15535 394 aaPredicted RBP14.59□□□□□ -0.07
IFT88-202ENST00000351808 KRT16P08779 473 aa14.59□□□□□ -0.07
IFT88-202ENST00000351808 HOXB7P09629 217 aa14.59□□□□□ -0.07
IFT88-202ENST00000351808 IMPDH2P12268 514 aa14.59□□□□□ -0.07
IFT88-202ENST00000351808 GUCY1A2P33402 732 aa14.59□□□□□ -0.07
IFT88-202ENST00000351808 POLE2P56282 527 aa14.59□□□□□ -0.07
IFT88-202ENST00000351808 NCALDP61601 193 aa14.59□□□□□ -0.07
IFT88-202ENST00000351808 NTRK3Q16288 839 aa14.59□□□□□ -0.07
IFT88-202ENST00000351808 RILPL1Q5EBL4 403 aa14.59□□□□□ -0.07
IFT88-202ENST00000351808 COPRSQ9NQ92 184 aa14.59□□□□□ -0.07
IFT88-202ENST00000351808 PCMTD2Q9NV79 361 aa14.59□□□□□ -0.07
IFT88-202ENST00000351808 SWAP70Q9UH65 585 aa14.59□□□□□ -0.07
IFT88-202ENST00000351808 SALL4Q9UJQ4 1053 aa14.59□□□□□ -0.07
IFT88-202ENST00000351808 A0A1W2PQC6 194 aa14.59□□□□□ -0.07
IFT88-202ENST00000351808 UBOX5O94941 541 aa14.59□□□□□ -0.07
IFT88-202ENST00000351808 PIP4K2AP48426 406 aaPredicted RBP14.59□□□□□ -0.07
IFT88-202ENST00000351808 ADAM9Q13443 819 aa14.59□□□□□ -0.07
IFT88-202ENST00000351808 SAFBQ15424 915 aaKnown RBP eCLIP14.59□□□□□ -0.07
IFT88-202ENST00000351808 ERMARDQ5T6L9 678 aa14.59□□□□□ -0.07
IFT88-202ENST00000351808 SYMPKQ92797 1274 aaKnown RBP14.59□□□□□ -0.07
IFT88-202ENST00000351808 ADAM22Q9P0K1 906 aa14.59□□□□□ -0.07
IFT88-202ENST00000351808 ANGEL1Q9UNK9 670 aaKnown RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms