RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 CCDC74BQ96LY2 380 aa9.25□□□□□ -0.93
UBE2D3-204ENST00000349311 EFR3BQ9Y2G0 817 aa9.25□□□□□ -0.93
UBE2D3-204ENST00000349311 CDC42BPGQ6DT37 1551 aa9.24□□□□□ -0.93
UBE2D3-204ENST00000349311 MAP2P11137 1827 aaKnown RBP9.24□□□□□ -0.93
UBE2D3-204ENST00000349311 SHPRHQ149N8 1683 aa9.24□□□□□ -0.93
UBE2D3-204ENST00000349311 CD163L1Q9NR16 1453 aa9.24□□□□□ -0.93
UBE2D3-204ENST00000349311 RBAK-RBAKDNI3L0D1 243 aa9.24□□□□□ -0.93
UBE2D3-204ENST00000349311 BAG4O95429 457 aaKnown RBP9.24□□□□□ -0.93
UBE2D3-204ENST00000349311 NME1P15531 152 aaKnown RBP9.24□□□□□ -0.93
UBE2D3-204ENST00000349311 ZNF746Q6NUN9 644 aaPredicted RBP9.24□□□□□ -0.93
UBE2D3-204ENST00000349311 NFXL1Q6ZNB6 911 aa9.24□□□□□ -0.93
UBE2D3-204ENST00000349311 CDH24Q86UP0 819 aa9.24□□□□□ -0.93
UBE2D3-204ENST00000349311 ANKLE2Q86XL3 938 aa9.24□□□□□ -0.93
UBE2D3-204ENST00000349311 SLC43A3Q8NBI5 491 aa9.24□□□□□ -0.93
UBE2D3-204ENST00000349311 XAGE3Q8WTP9 111 aa9.24□□□□□ -0.93
UBE2D3-204ENST00000349311 PRDM5Q9NQX1 630 aaPredicted RBP9.24□□□□□ -0.93
UBE2D3-204ENST00000349311 KLHL3Q9UH77 587 aa9.24□□□□□ -0.93
UBE2D3-204ENST00000349311 INPP5FQ9Y2H2 1132 aa9.24□□□□□ -0.93
UBE2D3-204ENST00000349311 NALCNQ8IZF0 1738 aa9.24□□□□□ -0.93
UBE2D3-204ENST00000349311 NRKQ7Z2Y5 1582 aa9.24□□□□□ -0.93
UBE2D3-204ENST00000349311 USP54Q70EL1 1684 aa9.23□□□□□ -0.93
UBE2D3-204ENST00000349311 UBOX5O94941 541 aa9.23□□□□□ -0.93
UBE2D3-204ENST00000349311 CEACAM5P06731 702 aa9.23□□□□□ -0.93
UBE2D3-204ENST00000349311 CDK11BP21127 795 aaKnown RBP9.23□□□□□ -0.93
UBE2D3-204ENST00000349311 CCNFP41002 786 aa9.23□□□□□ -0.93
UBE2D3-204ENST00000349311 HDAC1Q13547 482 aaPredicted RBP9.23□□□□□ -0.93
UBE2D3-204ENST00000349311 NKPD1Q17RQ9 610 aa9.23□□□□□ -0.93
UBE2D3-204ENST00000349311 ZSCAN23Q3MJ62 389 aa9.23□□□□□ -0.93
UBE2D3-204ENST00000349311 ARSHQ5FYA8 562 aa9.23□□□□□ -0.93
UBE2D3-204ENST00000349311 NLRC3Q7RTR2 1065 aa9.23□□□□□ -0.93
UBE2D3-204ENST00000349311 WFDC3Q8IUB2 231 aa9.23□□□□□ -0.93
UBE2D3-204ENST00000349311 BAHD1Q8TBE0 780 aaPredicted RBP9.23□□□□□ -0.93
UBE2D3-204ENST00000349311 GMLQ99445 158 aa9.23□□□□□ -0.93
UBE2D3-204ENST00000349311 STK26Q9P289 416 aa9.23□□□□□ -0.93
UBE2D3-204ENST00000349311 PPT2Q9UMR5 302 aa9.23□□□□□ -0.93
UBE2D3-204ENST00000349311 APAF1O14727 1248 aa9.22□□□□□ -0.93
UBE2D3-204ENST00000349311 PTMAP06454 111 aaKnown RBP9.22□□□□□ -0.93
UBE2D3-204ENST00000349311 SSTR4P31391 388 aa9.22□□□□□ -0.93
UBE2D3-204ENST00000349311 GIPRP48546 466 aa9.22□□□□□ -0.93
UBE2D3-204ENST00000349311 RARSP54136 660 aaKnown RBP9.22□□□□□ -0.93
UBE2D3-204ENST00000349311 GABPB1Q06547 395 aaPredicted RBP9.22□□□□□ -0.93
UBE2D3-204ENST00000349311 SFRP5Q5T4F7 317 aa9.22□□□□□ -0.93
UBE2D3-204ENST00000349311 SPACA3Q8IXA5 215 aa9.22□□□□□ -0.93
UBE2D3-204ENST00000349311 PLD6Q8N2A8 252 aaKnown RBP9.22□□□□□ -0.93
UBE2D3-204ENST00000349311 FAM181AQ8N9Y4 354 aa9.22□□□□□ -0.93
UBE2D3-204ENST00000349311 NETO1Q8TDF5 533 aa9.22□□□□□ -0.93
UBE2D3-204ENST00000349311 SHDQ96IW2 340 aa9.22□□□□□ -0.93
UBE2D3-204ENST00000349311 Q96M66 194 aa9.22□□□□□ -0.93
UBE2D3-204ENST00000349311 LRRC4CQ9HCJ2 640 aa9.22□□□□□ -0.93
UBE2D3-204ENST00000349311 SNX11Q9Y5W9 270 aa9.22□□□□□ -0.93
UBE2D3-204ENST00000349311 STRCQ7RTU9 1775 aa9.22□□□□□ -0.93
UBE2D3-204ENST00000349311 NPHP4O75161 1426 aaPredicted RBP9.22□□□□□ -0.93
UBE2D3-204ENST00000349311 PRR33A8MZF0 331 aa9.21□□□□□ -0.94
UBE2D3-204ENST00000349311 ADAMTS4O75173 837 aa9.21□□□□□ -0.94
UBE2D3-204ENST00000349311 CT47B1P0C2W7 299 aaPredicted RBP9.21□□□□□ -0.94
UBE2D3-204ENST00000349311 ACRP10323 421 aa9.21□□□□□ -0.94
UBE2D3-204ENST00000349311 ETV3P41162 512 aa9.21□□□□□ -0.94
UBE2D3-204ENST00000349311 KIR3DL1P43629 444 aa9.21□□□□□ -0.94
UBE2D3-204ENST00000349311 MVPQ14764 893 aaKnown RBP9.21□□□□□ -0.94
UBE2D3-204ENST00000349311 DNTTIP2Q5QJE6 756 aaKnown RBP9.21□□□□□ -0.94
UBE2D3-204ENST00000349311 LRSAM1Q6UWE0 723 aa9.21□□□□□ -0.94
UBE2D3-204ENST00000349311 FBXL18Q96ME1 805 aa9.21□□□□□ -0.94
UBE2D3-204ENST00000349311 KIF2CQ99661 725 aa9.21□□□□□ -0.94
UBE2D3-204ENST00000349311 FEZ1Q99689 392 aa9.21□□□□□ -0.94
UBE2D3-204ENST00000349311 TMEM51Q9NW97 253 aa9.21□□□□□ -0.94
UBE2D3-204ENST00000349311 CAPN6Q9Y6Q1 641 aa9.21□□□□□ -0.94
UBE2D3-204ENST00000349311 CPSF1Q10570 1443 aaKnown RBP9.21□□□□□ -0.94
UBE2D3-204ENST00000349311 NSD3Q9BZ95 1437 aa9.21□□□□□ -0.94
UBE2D3-204ENST00000349311 CCDC66A2RUB6 948 aa9.2□□□□□ -0.94
UBE2D3-204ENST00000349311 MBD3O95983 291 aa9.2□□□□□ -0.94
UBE2D3-204ENST00000349311 CBX1P83916 185 aa9.2□□□□□ -0.94
UBE2D3-204ENST00000349311 IFI16Q16666 785 aaKnown RBP9.2□□□□□ -0.94
UBE2D3-204ENST00000349311 CAVIN1Q6NZI2 390 aaKnown RBP9.2□□□□□ -0.94
UBE2D3-204ENST00000349311 LSRQ86X29 649 aaPredicted RBP9.2□□□□□ -0.94
UBE2D3-204ENST00000349311 WDR63Q8IWG1 891 aa9.2□□□□□ -0.94
UBE2D3-204ENST00000349311 CCDC146Q8IYE0 955 aa9.2□□□□□ -0.94
UBE2D3-204ENST00000349311 RNF141Q8WVD5 230 aa9.2□□□□□ -0.94
UBE2D3-204ENST00000349311 TM9SF2Q99805 663 aa9.2□□□□□ -0.94
UBE2D3-204ENST00000349311 CDK19Q9BWU1 502 aa9.2□□□□□ -0.94
UBE2D3-204ENST00000349311 CWC22Q9HCG8 908 aaKnown RBP9.2□□□□□ -0.94
UBE2D3-204ENST00000349311 DIAPH3Q9NSV4 1193 aa9.2□□□□□ -0.94
UBE2D3-204ENST00000349311 BSDC1Q9NW68 430 aaPredicted RBP9.2□□□□□ -0.94
UBE2D3-204ENST00000349311 TERF2IPQ9NYB0 399 aa9.2□□□□□ -0.94
UBE2D3-204ENST00000349311 KIF3AQ9Y496 699 aa9.2□□□□□ -0.94
UBE2D3-204ENST00000349311 ST14Q9Y5Y6 855 aa9.2□□□□□ -0.94
UBE2D3-204ENST00000349311 A0A1W2PP64 1363 aa9.2□□□□□ -0.94
UBE2D3-204ENST00000349311 ANKARQ7Z5J8 1434 aa9.2□□□□□ -0.94
UBE2D3-204ENST00000349311 IQSEC2Q5JU85 1478 aa9.2□□□□□ -0.94
UBE2D3-204ENST00000349311 RAG1P15918 1043 aa9.19□□□□□ -0.94
UBE2D3-204ENST00000349311 CYP7A1P22680 504 aa9.19□□□□□ -0.94
UBE2D3-204ENST00000349311 FAM193AP78312 1265 aa9.19□□□□□ -0.94
UBE2D3-204ENST00000349311 CHAF1AQ13111 956 aaPredicted RBP9.19□□□□□ -0.94
UBE2D3-204ENST00000349311 ZKSCAN2Q63HK3 967 aa9.19□□□□□ -0.94
UBE2D3-204ENST00000349311 WAPLQ7Z5K2 1190 aa9.19□□□□□ -0.94
UBE2D3-204ENST00000349311 PDCL2Q8N4E4 241 aa9.19□□□□□ -0.94
UBE2D3-204ENST00000349311 PIBF1Q8WXW3 757 aa9.19□□□□□ -0.94
UBE2D3-204ENST00000349311 SYAP1Q96A49 352 aaPredicted RBP9.19□□□□□ -0.94
UBE2D3-204ENST00000349311 SLC9A7Q96T83 725 aa9.19□□□□□ -0.94
UBE2D3-204ENST00000349311 SRRTQ9BXP5 876 aaKnown RBP9.19□□□□□ -0.94
UBE2D3-204ENST00000349311 SLC12A5Q9H2X9 1139 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms