RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 LDHDQ86WU2 507 aa21.17■□□□□ 0.98
PTN-201ENST00000348225 OPLAHO14841 1288 aa21.16■□□□□ 0.98
PTN-201ENST00000348225 USP11P51784 963 aa21.16■□□□□ 0.98
PTN-201ENST00000348225 ZRSR1Q15695 479 aaKnown RBP21.16■□□□□ 0.98
PTN-201ENST00000348225 IL17AQ16552 155 aa21.16■□□□□ 0.98
PTN-201ENST00000348225 CALCRLQ16602 461 aa21.16■□□□□ 0.98
PTN-201ENST00000348225 LONRF3Q496Y0 759 aa21.16■□□□□ 0.98
PTN-201ENST00000348225 DLK2Q6UY11 383 aa21.16■□□□□ 0.98
PTN-201ENST00000348225 EPSTI1Q96J88 318 aa21.16■□□□□ 0.98
PTN-201ENST00000348225 AK8Q96MA6 479 aa21.16■□□□□ 0.98
PTN-201ENST00000348225 SLC38A10Q9HBR0 1119 aa21.16■□□□□ 0.98
PTN-201ENST00000348225 KIAA1468Q9P260 1216 aa21.16■□□□□ 0.98
PTN-201ENST00000348225 USP25Q9UHP3 1055 aa21.16■□□□□ 0.98
PTN-201ENST00000348225 CCPG1Q9ULG6 757 aa21.16■□□□□ 0.98
PTN-201ENST00000348225 PARP14Q460N5 1801 aa21.16■□□□□ 0.98
PTN-201ENST00000348225 GCOM1H8Y6P7 765 aaPredicted RBP21.15■□□□□ 0.98
PTN-201ENST00000348225 ZBED4O75132 1171 aa21.15■□□□□ 0.98
PTN-201ENST00000348225 TDP2O95551 362 aa21.15■□□□□ 0.98
PTN-201ENST00000348225 CAVIN2O95810 425 aa21.15■□□□□ 0.98
PTN-201ENST00000348225 POLR2MP0CAP2 368 aa21.15■□□□□ 0.98
PTN-201ENST00000348225 STX1AQ16623 288 aa21.15■□□□□ 0.98
PTN-201ENST00000348225 MOXD1Q6UVY6 613 aa21.15■□□□□ 0.98
PTN-201ENST00000348225 USP49Q70CQ1 688 aa21.15■□□□□ 0.98
PTN-201ENST00000348225 POTEDQ86YR6 584 aa21.15■□□□□ 0.98
PTN-201ENST00000348225 POTECB2RU33 542 aa21.15■□□□□ 0.98
PTN-201ENST00000348225 TAL1P17542 331 aaPredicted RBP21.15■□□□□ 0.98
PTN-201ENST00000348225 TTLL12Q14166 644 aaPredicted RBP21.15■□□□□ 0.98
PTN-201ENST00000348225 SH3D19Q5HYK7 790 aa21.15■□□□□ 0.98
PTN-201ENST00000348225 ANKRD13AQ8IZ07 590 aa21.15■□□□□ 0.98
PTN-201ENST00000348225 RNF214Q8ND24 703 aa21.15■□□□□ 0.98
PTN-201ENST00000348225 ANP32BQ92688 251 aaKnown RBP21.15■□□□□ 0.98
PTN-201ENST00000348225 EHMT1Q9H9B1 1298 aa21.15■□□□□ 0.98
PTN-201ENST00000348225 DDX25Q9UHL0 483 aaKnown RBP21.15■□□□□ 0.98
PTN-201ENST00000348225 TMEM266Q2M3C6 531 aa21.14■□□□□ 0.97
PTN-201ENST00000348225 PDILTQ8N807 584 aa21.14■□□□□ 0.97
PTN-201ENST00000348225 ZNF536O15090 1300 aa21.13■□□□□ 0.97
PTN-201ENST00000348225 CFBP00751 764 aa21.13■□□□□ 0.97
PTN-201ENST00000348225 SREBF1P36956 1147 aa21.13■□□□□ 0.97
PTN-201ENST00000348225 ARHGAP4P98171 946 aa21.13■□□□□ 0.97
PTN-201ENST00000348225 ARMC9Q7Z3E5 817 aa21.13■□□□□ 0.97
PTN-201ENST00000348225 CEP57L1Q8IYX8 460 aa21.13■□□□□ 0.97
PTN-201ENST00000348225 DHX58Q96C10 678 aa21.13■□□□□ 0.97
PTN-201ENST00000348225 MTMR9Q96QG7 549 aa21.13■□□□□ 0.97
PTN-201ENST00000348225 PANK2Q9BZ23 570 aa21.13■□□□□ 0.97
PTN-201ENST00000348225 RAB34Q9BZG1 259 aa21.13■□□□□ 0.97
PTN-201ENST00000348225 ANO10Q9NW15 660 aa21.13■□□□□ 0.97
PTN-201ENST00000348225 SERTAD1Q9UHV2 236 aa21.13■□□□□ 0.97
PTN-201ENST00000348225 CLEC11AQ9Y240 323 aa21.13■□□□□ 0.97
PTN-201ENST00000348225 CYP3A7-CYP3A51PA0A087WV96 503 aa21.12■□□□□ 0.97
PTN-201ENST00000348225 ACTN4O43707 911 aaKnown RBP21.12■□□□□ 0.97
PTN-201ENST00000348225 SLC37A4O43826 429 aa21.12■□□□□ 0.97
PTN-201ENST00000348225 EDIL3O43854 480 aa21.12■□□□□ 0.97
PTN-201ENST00000348225 CYP3A7P24462 503 aa21.12■□□□□ 0.97
PTN-201ENST00000348225 HOXA13P31271 388 aaPredicted RBP21.12■□□□□ 0.97
PTN-201ENST00000348225 PPATQ06203 517 aa21.12■□□□□ 0.97
PTN-201ENST00000348225 UVSSAQ2YD98 709 aa21.12■□□□□ 0.97
PTN-201ENST00000348225 ANO6Q4KMQ2 910 aa21.12■□□□□ 0.97
PTN-201ENST00000348225 MCF2L2Q86YR7 1114 aa21.12■□□□□ 0.97
PTN-201ENST00000348225 IQUBQ8NA54 791 aa21.12■□□□□ 0.97
PTN-201ENST00000348225 FAM200AQ8TCP9 573 aa21.12■□□□□ 0.97
PTN-201ENST00000348225 AGBL1Q96MI9 1066 aa21.12■□□□□ 0.97
PTN-201ENST00000348225 SMCHD1A6NHR9 2005 aa21.12■□□□□ 0.97
PTN-201ENST00000348225 RBBP6Q7Z6E9 1792 aaKnown RBP21.12■□□□□ 0.97
PTN-201ENST00000348225 SLFN14P0C7P3 912 aa21.11■□□□□ 0.97
PTN-201ENST00000348225 UBA7P41226 1012 aa21.11■□□□□ 0.97
PTN-201ENST00000348225 ERO1BQ86YB8 467 aa21.11■□□□□ 0.97
PTN-201ENST00000348225 CRYGNQ8WXF5 182 aa21.11■□□□□ 0.97
PTN-201ENST00000348225 MYPNQ86TC9 1320 aa21.11■□□□□ 0.97
PTN-201ENST00000348225 PTPRFP10586 1907 aa21.11■□□□□ 0.97
PTN-201ENST00000348225 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.11■□□□□ 0.97
PTN-201ENST00000348225 VWA5AO00534 786 aa21.11■□□□□ 0.97
PTN-201ENST00000348225 MARCH6O60337 910 aa21.11■□□□□ 0.97
PTN-201ENST00000348225 DSG3P32926 999 aa21.11■□□□□ 0.97
PTN-201ENST00000348225 FXR2P51116 673 aaKnown RBP eCLIP21.11■□□□□ 0.97
PTN-201ENST00000348225 OAZ1P54368 228 aa21.11■□□□□ 0.97
PTN-201ENST00000348225 COG2Q14746 738 aa21.11■□□□□ 0.97
PTN-201ENST00000348225 POSTNQ15063 836 aa21.11■□□□□ 0.97
PTN-201ENST00000348225 CATSPERGQ6ZRH7 1159 aa21.11■□□□□ 0.97
PTN-201ENST00000348225 CPXCR1Q8N123 301 aa21.11■□□□□ 0.97
PTN-201ENST00000348225 SAMD3Q8N6K7 520 aa21.11■□□□□ 0.97
PTN-201ENST00000348225 MBOAT7Q96N66 472 aa21.11■□□□□ 0.97
PTN-201ENST00000348225 P2RX7Q99572 595 aaKnown RBP21.11■□□□□ 0.97
PTN-201ENST00000348225 CCSER1Q9C0I3 900 aa21.11■□□□□ 0.97
PTN-201ENST00000348225 ELP3Q9H9T3 547 aa21.11■□□□□ 0.97
PTN-201ENST00000348225 RAVER2Q9HCJ3 691 aaKnown RBP21.11■□□□□ 0.97
PTN-201ENST00000348225 CCDC39Q9UFE4 941 aa21.11■□□□□ 0.97
PTN-201ENST00000348225 RLFQ13129 1914 aa21.1■□□□□ 0.97
PTN-201ENST00000348225 A0A087X0B3 334 aa21.1■□□□□ 0.97
PTN-201ENST00000348225 TXKP42681 527 aa21.1■□□□□ 0.97
PTN-201ENST00000348225 PNOCQ13519 176 aa21.1■□□□□ 0.97
PTN-201ENST00000348225 FCHSD1Q86WN1 690 aa21.1■□□□□ 0.97
PTN-201ENST00000348225 RASSF8Q8NHQ8 419 aa21.1■□□□□ 0.97
PTN-201ENST00000348225 ERCC4Q92889 916 aaPredicted RBP21.1■□□□□ 0.97
PTN-201ENST00000348225 ATG4CQ96DT6 458 aa21.1■□□□□ 0.97
PTN-201ENST00000348225 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.1■□□□□ 0.97
PTN-201ENST00000348225 TUBE1Q9UJT0 475 aa21.1■□□□□ 0.97
PTN-201ENST00000348225 SPDYE5A6NIY4 337 aa21.09■□□□□ 0.97
PTN-201ENST00000348225 CYP3A4P08684 503 aa21.09■□□□□ 0.97
PTN-201ENST00000348225 ALAS1P13196 640 aa21.09■□□□□ 0.97
PTN-201ENST00000348225 TECP42680 631 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms