RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 TLR10Q9BXR5 811 aa16.99■□□□□ 0.31
LMNA-201ENST00000347559 TTYH3Q9C0H2 523 aa16.99■□□□□ 0.31
LMNA-201ENST00000347559 ATP6V0A4Q9HBG4 840 aa16.99■□□□□ 0.31
LMNA-201ENST00000347559 ARHGAP20Q9P2F6 1191 aa16.99■□□□□ 0.31
LMNA-201ENST00000347559 ECM29Q5VYK3 1845 aa16.99■□□□□ 0.31
LMNA-201ENST00000347559 NKRFO15226 690 aaKnown RBP eCLIP16.99■□□□□ 0.313e-7■□□□□ 10.1
LMNA-201ENST00000347559 TATP17735 454 aaPredicted RBP16.99■□□□□ 0.31
LMNA-201ENST00000347559 ESCO1Q5FWF5 840 aa16.99■□□□□ 0.31
LMNA-201ENST00000347559 PPP4R3AQ6IN85 833 aa16.99■□□□□ 0.31
LMNA-201ENST00000347559 PNMA8AQ86V59 439 aaPredicted RBP16.99■□□□□ 0.31
LMNA-201ENST00000347559 TCP11Q8WWU5 503 aa16.99■□□□□ 0.31
LMNA-201ENST00000347559 SPDL1Q96EA4 605 aa16.99■□□□□ 0.31
LMNA-201ENST00000347559 KRT23Q9C075 422 aa16.99■□□□□ 0.31
LMNA-201ENST00000347559 GLE1Q53GS7 698 aaKnown RBP16.98■□□□□ 0.31
LMNA-201ENST00000347559 STAMBPL1Q96FJ0 436 aa16.98■□□□□ 0.31
LMNA-201ENST00000347559 MMRN2Q9H8L6 949 aa16.98■□□□□ 0.31
LMNA-201ENST00000347559 PACSIN2Q9UNF0 486 aaPredicted RBP16.98■□□□□ 0.31
LMNA-201ENST00000347559 RTN2O75298 545 aa16.98■□□□□ 0.31
LMNA-201ENST00000347559 FTCDO95954 541 aa16.98■□□□□ 0.31
LMNA-201ENST00000347559 CLTAP09496 248 aa16.98■□□□□ 0.31
LMNA-201ENST00000347559 ANKLE2Q86XL3 938 aa16.98■□□□□ 0.31
LMNA-201ENST00000347559 CNOT6LQ96LI5 555 aaKnown RBP16.98■□□□□ 0.31
LMNA-201ENST00000347559 CNNM2Q9H8M5 875 aa16.98■□□□□ 0.31
LMNA-201ENST00000347559 GDF3Q9NR23 364 aa16.98■□□□□ 0.31
LMNA-201ENST00000347559 NBPF26B4DH59 902 aa16.97■□□□□ 0.31
LMNA-201ENST00000347559 BMP15O95972 392 aa16.97■□□□□ 0.31
LMNA-201ENST00000347559 PRLRP16471 622 aa16.97■□□□□ 0.31
LMNA-201ENST00000347559 NBPF10Q6P3W6 841 aaKnown RBP16.97■□□□□ 0.31
LMNA-201ENST00000347559 ZNF572Q7Z3I7 529 aaPredicted RBP16.97■□□□□ 0.31
LMNA-201ENST00000347559 NBPF15Q8N660 670 aa16.97■□□□□ 0.31
LMNA-201ENST00000347559 NSMCE1Q8WV22 266 aa16.97■□□□□ 0.31
LMNA-201ENST00000347559 MTMR8Q96EF0 704 aa16.97■□□□□ 0.31
LMNA-201ENST00000347559 THAP9Q9H5L6 903 aa16.97■□□□□ 0.31
LMNA-201ENST00000347559 NOD2Q9HC29 1040 aa16.97■□□□□ 0.31
LMNA-201ENST00000347559 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.97■□□□□ 0.31
LMNA-201ENST00000347559 BAZ2BQ9UIF8 2168 aaKnown RBP16.97■□□□□ 0.31
LMNA-201ENST00000347559 IL17AQ16552 155 aa16.97■□□□□ 0.31
LMNA-201ENST00000347559 TLDC1Q6P9B6 456 aa16.97■□□□□ 0.31
LMNA-201ENST00000347559 KIF9Q9HAQ2 790 aa16.97■□□□□ 0.31
LMNA-201ENST00000347559 TMBIM4Q9HC24 238 aa16.97■□□□□ 0.31
LMNA-201ENST00000347559 GGA2Q9UJY4 613 aa16.97■□□□□ 0.31
LMNA-201ENST00000347559 PP2D1A8MPX8 630 aa16.96■□□□□ 0.31
LMNA-201ENST00000347559 ATP2C1P98194 919 aaPredicted RBP16.96■□□□□ 0.31
LMNA-201ENST00000347559 FAM89AQ96GI7 184 aa16.96■□□□□ 0.31
LMNA-201ENST00000347559 EPHB6O15197 1021 aa16.96■□□□□ 0.31
LMNA-201ENST00000347559 PLEKHA8P1O95397 391 aa16.96■□□□□ 0.31
LMNA-201ENST00000347559 CSB-PGBD3P0DP91 1061 aa16.96■□□□□ 0.31
LMNA-201ENST00000347559 TNFRSF8P28908 595 aa16.96■□□□□ 0.31
LMNA-201ENST00000347559 CTNNA1P35221 906 aaKnown RBP16.96■□□□□ 0.31
LMNA-201ENST00000347559 IRX1P78414 480 aaPredicted RBP16.96■□□□□ 0.31
LMNA-201ENST00000347559 GFPT1Q06210 699 aaPredicted RBP16.96■□□□□ 0.31
LMNA-201ENST00000347559 RRAGAQ7L523 313 aa16.96■□□□□ 0.31
LMNA-201ENST00000347559 MAGEB6Q8N7X4 407 aa16.96■□□□□ 0.31
LMNA-201ENST00000347559 PHF20Q9BVI0 1012 aa16.96■□□□□ 0.31
LMNA-201ENST00000347559 L3MBTL1Q9Y468 752 aa16.96■□□□□ 0.31
LMNA-201ENST00000347559 MINDY4BA8MYZ0 360 aa16.96■□□□□ 0.31
LMNA-201ENST00000347559 TRAPPC3O43617 180 aa16.96■□□□□ 0.31
LMNA-201ENST00000347559 CEBPAP49715 358 aaPredicted RBP16.96■□□□□ 0.31
LMNA-201ENST00000347559 FAM69CQ0P6D2 419 aa16.96■□□□□ 0.31
LMNA-201ENST00000347559 UBE3CQ15386 1083 aa16.96■□□□□ 0.31
LMNA-201ENST00000347559 PKN1Q16512 942 aa16.96■□□□□ 0.31
LMNA-201ENST00000347559 TDRD12Q587J7 1177 aaKnown RBP16.96■□□□□ 0.31
LMNA-201ENST00000347559 GKAP1Q5VSY0 366 aaPredicted RBP16.96■□□□□ 0.31
LMNA-201ENST00000347559 DDX42Q86XP3 938 aaKnown RBP eCLIP16.96■□□□□ 0.31
LMNA-201ENST00000347559 UBLCP1Q8WVY7 318 aaPredicted RBP16.96■□□□□ 0.31
LMNA-201ENST00000347559 NOVA2Q9UNW9 492 aaKnown RBP16.96■□□□□ 0.31
LMNA-201ENST00000347559 BCL9LQ86UU0 1499 aa16.95■□□□□ 0.3
LMNA-201ENST00000347559 ATP6V1G2O95670 118 aa16.95■□□□□ 0.3
LMNA-201ENST00000347559 IFIT5Q13325 482 aaKnown RBP16.95■□□□□ 0.3
LMNA-201ENST00000347559 CDC37Q16543 378 aaPredicted RBP16.95■□□□□ 0.3
LMNA-201ENST00000347559 PTPROQ16827 1216 aa16.95■□□□□ 0.3
LMNA-201ENST00000347559 KLHDC7AQ5VTJ3 777 aa16.95■□□□□ 0.3
LMNA-201ENST00000347559 LDHAL6AQ6ZMR3 332 aa16.95■□□□□ 0.3
LMNA-201ENST00000347559 CD302Q8IX05 232 aa16.95■□□□□ 0.3
LMNA-201ENST00000347559 RETREG2Q8NC44 543 aa16.95■□□□□ 0.3
LMNA-201ENST00000347559 RAPGEF5Q92565 580 aa16.95■□□□□ 0.3
LMNA-201ENST00000347559 NOX5Q96PH1 765 aa16.95■□□□□ 0.3
LMNA-201ENST00000347559 C5P01031 1676 aa16.95■□□□□ 0.3
LMNA-201ENST00000347559 EME2A4GXA9 379 aaPredicted RBP16.95■□□□□ 0.3
LMNA-201ENST00000347559 PHKA1P46020 1223 aa16.95■□□□□ 0.3
LMNA-201ENST00000347559 RNF26Q9BY78 433 aaPredicted RBP16.95■□□□□ 0.3
LMNA-201ENST00000347559 RAD51CO43502 376 aa16.94■□□□□ 0.3
LMNA-201ENST00000347559 PHKG2P15735 406 aa16.94■□□□□ 0.3
LMNA-201ENST00000347559 HSD17B3P37058 310 aa16.94■□□□□ 0.3
LMNA-201ENST00000347559 SLC1A4P43007 532 aa16.94■□□□□ 0.3
LMNA-201ENST00000347559 ZC3H6P61129 1189 aaKnown RBP16.94■□□□□ 0.3
LMNA-201ENST00000347559 ELF3P78545 371 aaPredicted RBP16.94■□□□□ 0.3
LMNA-201ENST00000347559 ZKSCAN8Q15776 578 aaPredicted RBP16.94■□□□□ 0.3
LMNA-201ENST00000347559 ENOX2Q16206 610 aaKnown RBP16.94■□□□□ 0.3
LMNA-201ENST00000347559 TTI2Q6NXR4 508 aa16.94■□□□□ 0.3
LMNA-201ENST00000347559 WHAMMQ8TF30 809 aa16.94■□□□□ 0.3
LMNA-201ENST00000347559 CNNM1Q9NRU3 951 aa16.94■□□□□ 0.3
LMNA-201ENST00000347559 CNOT8Q9UFF9 292 aaKnown RBP16.94■□□□□ 0.3
LMNA-201ENST00000347559 MARF1Q9Y4F3 1742 aaKnown RBP16.94■□□□□ 0.3
LMNA-201ENST00000347559 ENO4A6NNW6 628 aa16.94■□□□□ 0.3
LMNA-201ENST00000347559 IFFO1Q0D2I5 559 aa16.94■□□□□ 0.3
LMNA-201ENST00000347559 CCDC178Q5BJE1 867 aa16.94■□□□□ 0.3
LMNA-201ENST00000347559 ARMC2Q8NEN0 867 aa16.94■□□□□ 0.3
LMNA-201ENST00000347559 DUSP9Q99956 384 aaKnown RBP16.94■□□□□ 0.3
LMNA-201ENST00000347559 DCDC2CA8MYV0 355 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms