RNA–Protein interactions for RNA: ENST00000347401.7

COL6A3-202, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 8,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-202ENST00000347401 SERPINB4P48594 390 aa14.44□□□□□ -0.1
COL6A3-202ENST00000347401 TPTE2Q6XPS3 522 aa14.44□□□□□ -0.1
COL6A3-202ENST00000347401 hCG_1984214I3L0E3 225 aa14.44□□□□□ -0.1
COL6A3-202ENST00000347401 ARHGEF10O15013 1369 aa14.44□□□□□ -0.1
COL6A3-202ENST00000347401 ALCAMQ13740 583 aa14.44□□□□□ -0.1
COL6A3-202ENST00000347401 PIK3AP1Q6ZUJ8 805 aa14.44□□□□□ -0.1
COL6A3-202ENST00000347401 BPIFA3Q9BQP9 254 aa14.44□□□□□ -0.1
COL6A3-202ENST00000347401 MCF2LO15068 1137 aa14.44□□□□□ -0.1
COL6A3-202ENST00000347401 SERPINI2O75830 405 aa14.44□□□□□ -0.1
COL6A3-202ENST00000347401 DMP1Q13316 513 aaPredicted RBP14.44□□□□□ -0.1
COL6A3-202ENST00000347401 SPARCL1Q14515 664 aa14.44□□□□□ -0.1
COL6A3-202ENST00000347401 RPS6KC1Q96S38 1066 aa14.44□□□□□ -0.1
COL6A3-202ENST00000347401 WDR7Q9Y4E6 1490 aa14.44□□□□□ -0.1
COL6A3-202ENST00000347401 TARSL2A2RTX5 802 aaKnown RBP14.44□□□□□ -0.1
COL6A3-202ENST00000347401 CRLF3Q8IUI8 442 aa14.44□□□□□ -0.1
COL6A3-202ENST00000347401 TBC1D22AQ8WUA7 517 aa14.44□□□□□ -0.1
COL6A3-202ENST00000347401 MTBPQ96DY7 904 aa14.44□□□□□ -0.1
COL6A3-202ENST00000347401 PPCSQ9HAB8 311 aa14.44□□□□□ -0.1
COL6A3-202ENST00000347401 ARPP21Q9UBL0 812 aaPredicted RBP14.44□□□□□ -0.1
COL6A3-202ENST00000347401 YTHDC2Q9H6S0 1430 aaKnown RBP14.44□□□□□ -0.1
COL6A3-202ENST00000347401 NEK8Q86SG6 692 aa14.44□□□□□ -0.1
COL6A3-202ENST00000347401 RMDN2Q96LZ7 410 aa14.44□□□□□ -0.1
COL6A3-202ENST00000347401 ZNF233A6NK53 670 aa14.44□□□□□ -0.1
COL6A3-202ENST00000347401 MSH2P43246 934 aa14.44□□□□□ -0.1
COL6A3-202ENST00000347401 RNASE9P60153 205 aaKnown RBP14.44□□□□□ -0.1
COL6A3-202ENST00000347401 CDR2Q01850 454 aa14.44□□□□□ -0.1
COL6A3-202ENST00000347401 SENP1Q9P0U3 644 aa14.44□□□□□ -0.1
COL6A3-202ENST00000347401 DENND4BO75064 1496 aaPredicted RBP14.43□□□□□ -0.1
COL6A3-202ENST00000347401 GNGT2O14610 69 aa14.43□□□□□ -0.1
COL6A3-202ENST00000347401 GPAA1O43292 621 aa14.43□□□□□ -0.1
COL6A3-202ENST00000347401 EFCAB14O75071 495 aa14.43□□□□□ -0.1
COL6A3-202ENST00000347401 EEF1B2P24534 225 aaKnown RBP14.43□□□□□ -0.1
COL6A3-202ENST00000347401 BFSP1Q12934 665 aa14.43□□□□□ -0.1
COL6A3-202ENST00000347401 PFKFB2O60825 505 aa14.43□□□□□ -0.1
COL6A3-202ENST00000347401 PNMA6AP0CW24 399 aaPredicted RBP14.43□□□□□ -0.1
COL6A3-202ENST00000347401 ANO5Q75V66 913 aa14.43□□□□□ -0.1
COL6A3-202ENST00000347401 COPS6Q7L5N1 327 aa14.43□□□□□ -0.1
COL6A3-202ENST00000347401 ATP8A2Q9NTI2 1148 aa14.43□□□□□ -0.1
COL6A3-202ENST00000347401 IFNA8P32881 189 aa14.43□□□□□ -0.1
COL6A3-202ENST00000347401 RARS2Q5T160 578 aaKnown RBP14.43□□□□□ -0.1
COL6A3-202ENST00000347401 ANKRD27Q96NW4 1050 aa14.43□□□□□ -0.1
COL6A3-202ENST00000347401 BICC1Q9H694 974 aaKnown RBP14.43□□□□□ -0.1
COL6A3-202ENST00000347401 ATP5J2-PTCD1G3V325 749 aa14.43□□□□□ -0.1
COL6A3-202ENST00000347401 IFNB1P01574 187 aa14.43□□□□□ -0.1
COL6A3-202ENST00000347401 DHX38Q92620 1227 aaKnown RBP14.43□□□□□ -0.1
COL6A3-202ENST00000347401 PHKBQ93100 1093 aa14.43□□□□□ -0.1
COL6A3-202ENST00000347401 DCAF5Q96JK2 942 aa14.43□□□□□ -0.1
COL6A3-202ENST00000347401 GAP43P17677 238 aa14.43□□□□□ -0.1
COL6A3-202ENST00000347401 MDM2Q00987 491 aaPredicted RBP14.43□□□□□ -0.1
COL6A3-202ENST00000347401 CASP8Q14790 479 aa14.43□□□□□ -0.1
COL6A3-202ENST00000347401 SESTD1Q86VW0 696 aa14.43□□□□□ -0.1
COL6A3-202ENST00000347401 TRIML2Q8N7C3 387 aa14.43□□□□□ -0.1
COL6A3-202ENST00000347401 MYO1FO00160 1098 aa14.43□□□□□ -0.1
COL6A3-202ENST00000347401 PFKFB1P16118 471 aa14.43□□□□□ -0.1
COL6A3-202ENST00000347401 ANAPC5Q9UJX4 755 aa14.43□□□□□ -0.1
COL6A3-202ENST00000347401 GPTP24298 496 aa14.42□□□□□ -0.1
COL6A3-202ENST00000347401 TNNI3KQ59H18 835 aa14.42□□□□□ -0.1
COL6A3-202ENST00000347401 ATP6V0A1Q93050 837 aa14.42□□□□□ -0.1
COL6A3-202ENST00000347401 FPGT-TNNI3KV9GXZ4 949 aa14.42□□□□□ -0.1
COL6A3-202ENST00000347401 ECEL1O95672 775 aa14.42□□□□□ -0.1
COL6A3-202ENST00000347401 RWDD2BP57060 319 aa14.42□□□□□ -0.1
COL6A3-202ENST00000347401 PSMD2Q13200 908 aa14.42□□□□□ -0.1
COL6A3-202ENST00000347401 SNX1Q13596 522 aa14.42□□□□□ -0.1
COL6A3-202ENST00000347401 ZC3H18Q86VM9 953 aaKnown RBP14.42□□□□□ -0.1
COL6A3-202ENST00000347401 DDAH1O94760 285 aa14.42□□□□□ -0.1
COL6A3-202ENST00000347401 ESRRAP11474 423 aaPredicted RBP14.42□□□□□ -0.1
COL6A3-202ENST00000347401 PPARGP37231 505 aaPredicted RBP14.42□□□□□ -0.1
COL6A3-202ENST00000347401 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.42□□□□□ -0.1
COL6A3-202ENST00000347401 KIF20BQ96Q89 1820 aa14.42□□□□□ -0.1
COL6A3-202ENST00000347401 MYO1CO00159 1063 aa14.42□□□□□ -0.1
COL6A3-202ENST00000347401 ECE1P42892 770 aa14.42□□□□□ -0.1
COL6A3-202ENST00000347401 KRR1Q13601 381 aaKnown RBP14.42□□□□□ -0.1
COL6A3-202ENST00000347401 ICA1LQ8NDH6 482 aa14.42□□□□□ -0.1
COL6A3-202ENST00000347401 TTC37Q6PGP7 1564 aa14.42□□□□□ -0.1
COL6A3-202ENST00000347401 CWF19L2Q2TBE0 894 aaKnown RBP14.42□□□□□ -0.1
COL6A3-202ENST00000347401 KRT40Q6A162 431 aa14.42□□□□□ -0.1
COL6A3-202ENST00000347401 CHEK2O96017 543 aa14.42□□□□□ -0.1
COL6A3-202ENST00000347401 IRX5P78411 483 aaPredicted RBP14.42□□□□□ -0.1
COL6A3-202ENST00000347401 CABP7Q86V35 215 aa14.42□□□□□ -0.1
COL6A3-202ENST00000347401 MAML3Q96JK9 1138 aa14.42□□□□□ -0.1
COL6A3-202ENST00000347401 SEPT3Q9UH03 358 aa14.42□□□□□ -0.1
COL6A3-202ENST00000347401 KMT5BQ4FZB7 885 aa14.42□□□□□ -0.1
COL6A3-202ENST00000347401 MOV10L1Q9BXT6 1211 aaKnown RBP14.42□□□□□ -0.1
COL6A3-202ENST00000347401 ZMYND12Q9H0C1 365 aa14.42□□□□□ -0.1
COL6A3-202ENST00000347401 RWDD2AQ9UIY3 292 aa14.42□□□□□ -0.1
COL6A3-202ENST00000347401 KRT10P13645 584 aa14.41□□□□□ -0.1
COL6A3-202ENST00000347401 EXOC3L4Q17RC7 722 aa14.41□□□□□ -0.1
COL6A3-202ENST00000347401 RPN1P04843 607 aaKnown RBP14.41□□□□□ -0.1
COL6A3-202ENST00000347401 ATP5JP18859 108 aa14.41□□□□□ -0.1
COL6A3-202ENST00000347401 KCNJ6P48051 423 aa14.41□□□□□ -0.1
COL6A3-202ENST00000347401 PTK2Q05397 1052 aa14.41□□□□□ -0.1
COL6A3-202ENST00000347401 ZSWIM6Q9HCJ5 1215 aa14.41□□□□□ -0.1
COL6A3-202ENST00000347401 PCDH11XQ9BZA7 1347 aa14.41□□□□□ -0.1
COL6A3-202ENST00000347401 PCDH11YQ9BZA8 1340 aa14.41□□□□□ -0.1
COL6A3-202ENST00000347401 RPSAP08865 295 aaKnown RBP14.41□□□□□ -0.1
COL6A3-202ENST00000347401 POLE2P56282 527 aa14.41□□□□□ -0.1
COL6A3-202ENST00000347401 ZC3H12CQ9C0D7 883 aaKnown RBP14.41□□□□□ -0.1
COL6A3-202ENST00000347401 EYA2O00167 538 aa14.41□□□□□ -0.1
COL6A3-202ENST00000347401 MMEP08473 750 aa14.41□□□□□ -0.1
COL6A3-202ENST00000347401 BBS5Q8N3I7 341 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms