RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 CALCRLQ16602 461 aa24.32■■□□□ 1.48
TSPAN3-202ENST00000346495 LDHDQ86WU2 507 aa24.32■■□□□ 1.48
TSPAN3-202ENST00000346495 FAM200AQ8TCP9 573 aa24.32■■□□□ 1.48
TSPAN3-202ENST00000346495 AK8Q96MA6 479 aa24.32■■□□□ 1.48
TSPAN3-202ENST00000346495 WDR90Q96KV7 1748 aa24.32■■□□□ 1.48
TSPAN3-202ENST00000346495 PARP14Q460N5 1801 aa24.32■■□□□ 1.48
TSPAN3-202ENST00000346495 OTOFQ9HC10 1997 aa24.32■■□□□ 1.48
TSPAN3-202ENST00000346495 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.32■■□□□ 1.48
TSPAN3-202ENST00000346495 ACTN4O43707 911 aaKnown RBP24.32■■□□□ 1.48
TSPAN3-202ENST00000346495 FLOT1O75955 427 aa24.32■■□□□ 1.48
TSPAN3-202ENST00000346495 TAL1P17542 331 aaPredicted RBP24.32■■□□□ 1.48
TSPAN3-202ENST00000346495 IREB2P48200 963 aaKnown RBP24.32■■□□□ 1.48
TSPAN3-202ENST00000346495 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.32■■□□□ 1.48
TSPAN3-202ENST00000346495 POTEDQ86YR6 584 aa24.32■■□□□ 1.48
TSPAN3-202ENST00000346495 ERCC4Q92889 916 aaPredicted RBP24.32■■□□□ 1.48
TSPAN3-202ENST00000346495 DHX58Q96C10 678 aa24.32■■□□□ 1.48
TSPAN3-202ENST00000346495 PNMA2Q9UL42 364 aa24.32■■□□□ 1.48
TSPAN3-202ENST00000346495 PPP1R9AQ9ULJ8 1098 aa24.32■■□□□ 1.48
TSPAN3-202ENST00000346495 AFG3L2Q9Y4W6 797 aa24.32■■□□□ 1.48
TSPAN3-202ENST00000346495 CSADQ9Y600 493 aa24.32■■□□□ 1.48
TSPAN3-202ENST00000346495 SMCHD1A6NHR9 2005 aa24.31■■□□□ 1.48
TSPAN3-202ENST00000346495 VGLL4Q14135 290 aa24.31■■□□□ 1.48
TSPAN3-202ENST00000346495 MOXD1Q6UVY6 613 aa24.31■■□□□ 1.48
TSPAN3-202ENST00000346495 DLK2Q6UY11 383 aa24.31■■□□□ 1.48
TSPAN3-202ENST00000346495 CDCA5Q96FF9 252 aa24.31■■□□□ 1.48
TSPAN3-202ENST00000346495 MTMR9Q96QG7 549 aa24.31■■□□□ 1.48
TSPAN3-202ENST00000346495 TMOD4Q9NZQ9 345 aa24.31■■□□□ 1.48
TSPAN3-202ENST00000346495 DDX25Q9UHL0 483 aaKnown RBP24.31■■□□□ 1.48
TSPAN3-202ENST00000346495 TUBE1Q9UJT0 475 aa24.31■■□□□ 1.48
TSPAN3-202ENST00000346495 SNCAIPQ9Y6H5 919 aa24.31■■□□□ 1.48
TSPAN3-202ENST00000346495 A0A087X0B3 334 aa24.3■■□□□ 1.48
TSPAN3-202ENST00000346495 SLFN14P0C7P3 912 aa24.3■■□□□ 1.48
TSPAN3-202ENST00000346495 PNMA8AQ86V59 439 aaPredicted RBP24.3■■□□□ 1.48
TSPAN3-202ENST00000346495 CEP57L1Q8IYX8 460 aa24.3■■□□□ 1.48
TSPAN3-202ENST00000346495 SLC38A10Q9HBR0 1119 aa24.3■■□□□ 1.48
TSPAN3-202ENST00000346495 CCPG1Q9ULG6 757 aa24.3■■□□□ 1.48
TSPAN3-202ENST00000346495 GCOM1H8Y6P7 765 aaPredicted RBP24.29■■□□□ 1.48
TSPAN3-202ENST00000346495 SLC37A4O43826 429 aa24.29■■□□□ 1.48
TSPAN3-202ENST00000346495 POLR2MP0CAP2 368 aa24.29■■□□□ 1.48
TSPAN3-202ENST00000346495 HMGCS2P54868 508 aa24.29■■□□□ 1.48
TSPAN3-202ENST00000346495 MDM2Q00987 491 aaPredicted RBP24.29■■□□□ 1.48
TSPAN3-202ENST00000346495 POSTNQ15063 836 aa24.29■■□□□ 1.48
TSPAN3-202ENST00000346495 IQUBQ8NA54 791 aa24.29■■□□□ 1.48
TSPAN3-202ENST00000346495 RBM46Q8TBY0 533 aaKnown RBP24.29■■□□□ 1.48
TSPAN3-202ENST00000346495 CCSER1Q9C0I3 900 aa24.29■■□□□ 1.48
TSPAN3-202ENST00000346495 DNAJC25Q9H1X3 360 aa24.29■■□□□ 1.48
TSPAN3-202ENST00000346495 CTDP1Q9Y5B0 961 aaPredicted RBP24.29■■□□□ 1.48
TSPAN3-202ENST00000346495 ZNF536O15090 1300 aa24.29■■□□□ 1.48
TSPAN3-202ENST00000346495 CYP3A7-CYP3A51PA0A087WV96 503 aa24.28■■□□□ 1.48
TSPAN3-202ENST00000346495 ZBED4O75132 1171 aa24.28■■□□□ 1.48
TSPAN3-202ENST00000346495 CYP3A7P24462 503 aa24.28■■□□□ 1.48
TSPAN3-202ENST00000346495 SREBF1P36956 1147 aa24.28■■□□□ 1.48
TSPAN3-202ENST00000346495 ARHGAP4P98171 946 aa24.28■■□□□ 1.48
TSPAN3-202ENST00000346495 PNOCQ13519 176 aa24.28■■□□□ 1.48
TSPAN3-202ENST00000346495 TMEM266Q2M3C6 531 aa24.28■■□□□ 1.48
TSPAN3-202ENST00000346495 EAPPQ56P03 285 aaPredicted RBP24.28■■□□□ 1.48
TSPAN3-202ENST00000346495 CRYGNQ8WXF5 182 aa24.28■■□□□ 1.48
TSPAN3-202ENST00000346495 P2RX7Q99572 595 aaKnown RBP24.28■■□□□ 1.48
TSPAN3-202ENST00000346495 CFBP00751 764 aa24.28■■□□□ 1.48
TSPAN3-202ENST00000346495 HOXA13P31271 388 aaPredicted RBP24.28■■□□□ 1.48
TSPAN3-202ENST00000346495 UBA7P41226 1012 aa24.28■■□□□ 1.48
TSPAN3-202ENST00000346495 FXR2P51116 673 aaKnown RBP eCLIP24.28■■□□□ 1.48
TSPAN3-202ENST00000346495 NLRP12P59046 1061 aa24.28■■□□□ 1.48
TSPAN3-202ENST00000346495 SH3D19Q5HYK7 790 aa24.28■■□□□ 1.48
TSPAN3-202ENST00000346495 AGBL1Q96MI9 1066 aa24.28■■□□□ 1.48
TSPAN3-202ENST00000346495 MBOAT7Q96N66 472 aa24.28■■□□□ 1.48
TSPAN3-202ENST00000346495 POTECB2RU33 542 aa24.27■■□□□ 1.48
TSPAN3-202ENST00000346495 TXKP42681 527 aa24.27■■□□□ 1.48
TSPAN3-202ENST00000346495 ZNF165P49910 485 aa24.27■■□□□ 1.48
TSPAN3-202ENST00000346495 E2F4Q16254 413 aa24.27■■□□□ 1.48
TSPAN3-202ENST00000346495 RAB34Q9BZG1 259 aa24.27■■□□□ 1.48
TSPAN3-202ENST00000346495 EHMT1Q9H9B1 1298 aa24.27■■□□□ 1.48
TSPAN3-202ENST00000346495 CBX8Q9HC52 389 aa24.27■■□□□ 1.48
TSPAN3-202ENST00000346495 CCDC39Q9UFE4 941 aa24.27■■□□□ 1.48
TSPAN3-202ENST00000346495 TECP42680 631 aa24.26■■□□□ 1.47
TSPAN3-202ENST00000346495 SH3RF1Q7Z6J0 888 aa24.26■■□□□ 1.47
TSPAN3-202ENST00000346495 IGSF22Q8N9C0 903 aa24.26■■□□□ 1.47
TSPAN3-202ENST00000346495 NAT10Q9H0A0 1025 aaKnown RBP24.26■■□□□ 1.47
TSPAN3-202ENST00000346495 RLFQ13129 1914 aa24.25■■□□□ 1.47
TSPAN3-202ENST00000346495 FOXN1O15353 648 aa24.25■■□□□ 1.47
TSPAN3-202ENST00000346495 FCHSD1Q86WN1 690 aa24.25■■□□□ 1.47
TSPAN3-202ENST00000346495 ANKRD13AQ8IZ07 590 aa24.25■■□□□ 1.47
TSPAN3-202ENST00000346495 RAVER2Q9HCJ3 691 aaKnown RBP24.25■■□□□ 1.47
TSPAN3-202ENST00000346495 PCDHA5Q9Y5H7 936 aa24.25■■□□□ 1.47
TSPAN3-202ENST00000346495 RBBP6Q7Z6E9 1792 aaKnown RBP24.25■■□□□ 1.47
TSPAN3-202ENST00000346495 PTPRFP10586 1907 aa24.25■■□□□ 1.47
TSPAN3-202ENST00000346495 VWA5AO00534 786 aa24.24■■□□□ 1.47
TSPAN3-202ENST00000346495 MARCH6O60337 910 aa24.24■■□□□ 1.47
TSPAN3-202ENST00000346495 CYP3A4P08684 503 aa24.24■■□□□ 1.47
TSPAN3-202ENST00000346495 CDC25AP30304 524 aa24.24■■□□□ 1.47
TSPAN3-202ENST00000346495 CIITAP33076 1130 aa24.24■■□□□ 1.47
TSPAN3-202ENST00000346495 PDIA5Q14554 519 aa24.24■■□□□ 1.47
TSPAN3-202ENST00000346495 C11orf57Q6ZUT1 292 aaPredicted RBP24.24■■□□□ 1.47
TSPAN3-202ENST00000346495 CABP7Q86V35 215 aa24.24■■□□□ 1.47
TSPAN3-202ENST00000346495 MCF2L2Q86YR7 1114 aa24.24■■□□□ 1.47
TSPAN3-202ENST00000346495 CPXCR1Q8N123 301 aa24.24■■□□□ 1.47
TSPAN3-202ENST00000346495 SAMD3Q8N6K7 520 aa24.24■■□□□ 1.47
TSPAN3-202ENST00000346495 TBC1D5Q92609 795 aa24.24■■□□□ 1.47
TSPAN3-202ENST00000346495 PAGE5Q96GU1 130 aa24.24■■□□□ 1.47
TSPAN3-202ENST00000346495 DISC1Q9NRI5 854 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms