RNA–Protein interactions for RNA: ENST00000346330.6

UBE2A-201, Transcript of ubiquitin conjugating enzyme E2 A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2A, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2A-201ENST00000346330 RASIP1Q5U651 963 aa12.92□□□□□ -0.34
UBE2A-201ENST00000346330 ZNF365Q70YC5 407 aa12.92□□□□□ -0.34
UBE2A-201ENST00000346330 MORC4Q8TE76 937 aa12.92□□□□□ -0.34
UBE2A-201ENST00000346330 RILPL2Q969X0 211 aa12.92□□□□□ -0.34
UBE2A-201ENST00000346330 IL25Q9H293 177 aa12.92□□□□□ -0.34
UBE2A-201ENST00000346330 CCDC171Q6TFL3 1326 aa12.91□□□□□ -0.34
UBE2A-201ENST00000346330 TRIM6-TRIM34B2RNG4 842 aa12.91□□□□□ -0.34
UBE2A-201ENST00000346330 FOSL2P15408 326 aa12.91□□□□□ -0.34
UBE2A-201ENST00000346330 SDSP20132 328 aa12.91□□□□□ -0.34
UBE2A-201ENST00000346330 ALDH5A1P51649 535 aaPredicted RBP12.91□□□□□ -0.34
UBE2A-201ENST00000346330 CCL23P55773 120 aa12.91□□□□□ -0.34
UBE2A-201ENST00000346330 ZNF543Q08ER8 600 aa12.91□□□□□ -0.34
UBE2A-201ENST00000346330 ITGA7Q13683 1181 aa12.91□□□□□ -0.34
UBE2A-201ENST00000346330 KIAA1211Q6ZU35 1233 aa12.91□□□□□ -0.34
UBE2A-201ENST00000346330 PLEKHM2Q8IWE5 1019 aa12.91□□□□□ -0.34
UBE2A-201ENST00000346330 SMC5Q8IY18 1101 aa12.91□□□□□ -0.34
UBE2A-201ENST00000346330 YTHDC1Q96MU7 727 aaKnown RBP12.91□□□□□ -0.34
UBE2A-201ENST00000346330 PBX4Q9BYU1 374 aa12.91□□□□□ -0.34
UBE2A-201ENST00000346330 WNT8AQ9H1J5 351 aa12.91□□□□□ -0.34
UBE2A-201ENST00000346330 TCP11L1Q9NUJ3 509 aa12.91□□□□□ -0.34
UBE2A-201ENST00000346330 MROH7Q68CQ1 1323 aa12.9□□□□□ -0.34
UBE2A-201ENST00000346330 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.9□□□□□ -0.34
UBE2A-201ENST00000346330 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.9□□□□□ -0.34
UBE2A-201ENST00000346330 PTPDC1A2A3K4 754 aa12.9□□□□□ -0.34
UBE2A-201ENST00000346330 SNHG28P0DPA3 235 aa12.9□□□□□ -0.34
UBE2A-201ENST00000346330 CALML3P27482 149 aa12.9□□□□□ -0.34
UBE2A-201ENST00000346330 PPP4R3BQ5MIZ7 849 aa12.9□□□□□ -0.34
UBE2A-201ENST00000346330 AKNAD1Q5T1N1 836 aa12.9□□□□□ -0.34
UBE2A-201ENST00000346330 TBC1D5Q92609 795 aa12.9□□□□□ -0.34
UBE2A-201ENST00000346330 COPS5Q92905 334 aa12.9□□□□□ -0.34
UBE2A-201ENST00000346330 TIFAQ96CG3 184 aa12.9□□□□□ -0.34
UBE2A-201ENST00000346330 UBA5Q9GZZ9 404 aa12.9□□□□□ -0.34
UBE2A-201ENST00000346330 AP5M1Q9H0R1 490 aa12.9□□□□□ -0.34
UBE2A-201ENST00000346330 HIPK3Q9H422 1215 aa12.9□□□□□ -0.34
UBE2A-201ENST00000346330 PRDM6Q9NQX0 595 aa12.9□□□□□ -0.34
UBE2A-201ENST00000346330 ZBTB47Q9UFB7 747 aaPredicted RBP12.9□□□□□ -0.34
UBE2A-201ENST00000346330 ZMYM6O95789 1325 aa12.89□□□□□ -0.35
UBE2A-201ENST00000346330 PPIGQ13427 754 aaKnown RBP eCLIP12.89□□□□□ -0.351e-6■■■■□ 24.6
UBE2A-201ENST00000346330 IQSEC1Q6DN90 963 aa12.89□□□□□ -0.35
UBE2A-201ENST00000346330 EXOC6Q8TAG9 804 aa12.89□□□□□ -0.35
UBE2A-201ENST00000346330 SCLYQ96I15 445 aa12.89□□□□□ -0.35
UBE2A-201ENST00000346330 NOC4LQ9BVI4 516 aaKnown RBP12.89□□□□□ -0.35
UBE2A-201ENST00000346330 WDR11Q9BZH6 1224 aa12.89□□□□□ -0.35
UBE2A-201ENST00000346330 ZNF576Q9H609 170 aa12.89□□□□□ -0.35
UBE2A-201ENST00000346330 VTA1Q9NP79 307 aa12.89□□□□□ -0.35
UBE2A-201ENST00000346330 TRMT13Q9NUP7 481 aaKnown RBP12.89□□□□□ -0.35
UBE2A-201ENST00000346330 TLR3O15455 904 aaKnown RBP12.88□□□□□ -0.35
UBE2A-201ENST00000346330 ARIH2O95376 493 aa12.88□□□□□ -0.35
UBE2A-201ENST00000346330 CYP2C9P11712 490 aa12.88□□□□□ -0.35
UBE2A-201ENST00000346330 EDNRBP24530 442 aa12.88□□□□□ -0.35
UBE2A-201ENST00000346330 RPS6P62753 249 aaKnown RBP12.88□□□□□ -0.35
UBE2A-201ENST00000346330 NUCB1Q02818 461 aa12.88□□□□□ -0.35
UBE2A-201ENST00000346330 USH1GQ495M9 461 aa12.88□□□□□ -0.35
UBE2A-201ENST00000346330 DUSP28Q4G0W2 176 aa12.88□□□□□ -0.35
UBE2A-201ENST00000346330 CWC27Q6UX04 472 aaKnown RBP12.88□□□□□ -0.35
UBE2A-201ENST00000346330 MFSD6Q6ZSS7 791 aa12.88□□□□□ -0.35
UBE2A-201ENST00000346330 OTOP2Q7RTS6 562 aa12.88□□□□□ -0.35
UBE2A-201ENST00000346330 CHD1LQ86WJ1 897 aa12.88□□□□□ -0.35
UBE2A-201ENST00000346330 TMEM199Q8N511 208 aa12.88□□□□□ -0.35
UBE2A-201ENST00000346330 IL23AQ9NPF7 189 aa12.88□□□□□ -0.35
UBE2A-201ENST00000346330 COL20A1Q9P218 1284 aa12.88□□□□□ -0.35
UBE2A-201ENST00000346330 YBX2Q9Y2T7 364 aaKnown RBP12.88□□□□□ -0.35
UBE2A-201ENST00000346330 TMEM265A0A087WTH1 108 aa12.87□□□□□ -0.35
UBE2A-201ENST00000346330 RBM47A0AV96 593 aaKnown RBP12.87□□□□□ -0.35
UBE2A-201ENST00000346330 KDM4AO75164 1064 aa12.87□□□□□ -0.35
UBE2A-201ENST00000346330 PURAQ00577 322 aaKnown RBP12.87□□□□□ -0.35
UBE2A-201ENST00000346330 ADGRE1Q14246 886 aa12.87□□□□□ -0.35
UBE2A-201ENST00000346330 RNF207Q6ZRF8 634 aa12.87□□□□□ -0.35
UBE2A-201ENST00000346330 HERVK_113Q902F9 699 aa12.87□□□□□ -0.35
UBE2A-201ENST00000346330 ALDH8A1Q9H2A2 487 aaPredicted RBP12.87□□□□□ -0.35
UBE2A-201ENST00000346330 PRDM12Q9H4Q4 367 aa12.87□□□□□ -0.35
UBE2A-201ENST00000346330 Q9Y3F1 56 aa12.87□□□□□ -0.35
UBE2A-201ENST00000346330 GBF1Q92538 1859 aa12.87□□□□□ -0.35
UBE2A-201ENST00000346330 B4E1Z4 1266 aa12.86□□□□□ -0.35
UBE2A-201ENST00000346330 CABYRO75952 493 aa12.86□□□□□ -0.35
UBE2A-201ENST00000346330 MYL3P08590 195 aa12.86□□□□□ -0.35
UBE2A-201ENST00000346330 MYOGP15173 224 aa12.86□□□□□ -0.35
UBE2A-201ENST00000346330 RABGGTBP53611 331 aa12.86□□□□□ -0.35
UBE2A-201ENST00000346330 PSRC1Q6PGN9 363 aaPredicted RBP12.86□□□□□ -0.35
UBE2A-201ENST00000346330 TTC14Q96N46 770 aa12.86□□□□□ -0.35
UBE2A-201ENST00000346330 NKX2-4Q9H2Z4 354 aa12.86□□□□□ -0.35
UBE2A-201ENST00000346330 OSBPL3Q9H4L5 887 aa12.86□□□□□ -0.35
UBE2A-201ENST00000346330 TRANK1O15050 2925 aa12.85□□□□□ -0.35
UBE2A-201ENST00000346330 ZNF213O14771 459 aa12.85□□□□□ -0.35
UBE2A-201ENST00000346330 FGBP02675 491 aa12.85□□□□□ -0.35
UBE2A-201ENST00000346330 TTLL4Q14679 1199 aa12.85□□□□□ -0.35
UBE2A-201ENST00000346330 ENAHQ8N8S7 591 aaPredicted RBP12.85□□□□□ -0.35
UBE2A-201ENST00000346330 PNMA1Q8ND90 353 aa12.85□□□□□ -0.35
UBE2A-201ENST00000346330 OR6J1Q8NGC5 347 aa12.85□□□□□ -0.35
UBE2A-201ENST00000346330 ESR2Q92731 530 aa12.85□□□□□ -0.35
UBE2A-201ENST00000346330 ZSWIM5Q9P217 1185 aa12.85□□□□□ -0.35
UBE2A-201ENST00000346330 ADD3Q9UEY8 706 aaKnown RBP12.85□□□□□ -0.35
UBE2A-201ENST00000346330 U3KPZ7 1027 aaPredicted RBP12.85□□□□□ -0.35
UBE2A-201ENST00000346330 WDR19Q8NEZ3 1342 aa12.85□□□□□ -0.35
UBE2A-201ENST00000346330 ZEB2O60315 1214 aa12.84□□□□□ -0.35
UBE2A-201ENST00000346330 PDE4AP27815 886 aa12.84□□□□□ -0.35
UBE2A-201ENST00000346330 PDE4DQ08499 809 aa12.84□□□□□ -0.35
UBE2A-201ENST00000346330 PPP2R5BQ15173 497 aa12.84□□□□□ -0.35
UBE2A-201ENST00000346330 CDC37Q16543 378 aaPredicted RBP12.84□□□□□ -0.35
UBE2A-201ENST00000346330 SLC35G1Q2M3R5 365 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms