RNA–Protein interactions for RNA: ENST00000345990.8

CSNK1G3-201, Transcript of casein kinase 1 gamma 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSNK1G3, Length 4,635 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3-201ENST00000345990 NSUN6Q8TEA1 469 aaKnown RBP15.24■□□□□ 0.03
CSNK1G3-201ENST00000345990 GLG1Q92896 1179 aa15.24■□□□□ 0.03
CSNK1G3-201ENST00000345990 TBC1D22BQ9NU19 505 aa15.24■□□□□ 0.03
CSNK1G3-201ENST00000345990 PCDHA6Q9UN73 950 aa15.24■□□□□ 0.03
CSNK1G3-201ENST00000345990 PCDHA8Q9Y5H6 950 aa15.24■□□□□ 0.03
CSNK1G3-201ENST00000345990 DOT1LQ8TEK3 1739 aa15.24■□□□□ 0.03
CSNK1G3-201ENST00000345990 PDHBP11177 359 aa15.24■□□□□ 0.03
CSNK1G3-201ENST00000345990 PPP2R5AQ15172 486 aa15.24■□□□□ 0.03
CSNK1G3-201ENST00000345990 MIS18BP1Q6P0N0 1132 aa15.24■□□□□ 0.03
CSNK1G3-201ENST00000345990 CNGA4Q8IV77 575 aa15.24■□□□□ 0.03
CSNK1G3-201ENST00000345990 MYCT1Q8N699 235 aa15.24■□□□□ 0.03
CSNK1G3-201ENST00000345990 NEK11Q8NG66 645 aa15.24■□□□□ 0.03
CSNK1G3-201ENST00000345990 ACAD9Q9H845 621 aa15.24■□□□□ 0.03
CSNK1G3-201ENST00000345990 TTC12Q9H892 705 aaPredicted RBP15.24■□□□□ 0.03
CSNK1G3-201ENST00000345990 CAP2P40123 477 aa15.23■□□□□ 0.03
CSNK1G3-201ENST00000345990 SRBD1Q8N5C6 995 aaKnown RBP15.23■□□□□ 0.03
CSNK1G3-201ENST00000345990 CCDC169A6NNP5 214 aa15.23■□□□□ 0.03
CSNK1G3-201ENST00000345990 DDX39AO00148 427 aaKnown RBP15.23■□□□□ 0.03
CSNK1G3-201ENST00000345990 JAK3P52333 1124 aa15.23■□□□□ 0.03
CSNK1G3-201ENST00000345990 VWA3BQ502W6 1294 aa15.23■□□□□ 0.03
CSNK1G3-201ENST00000345990 PRPHP41219 470 aa15.23■□□□□ 0.03
CSNK1G3-201ENST00000345990 KCTD17Q8N5Z5 321 aa15.23■□□□□ 0.03
CSNK1G3-201ENST00000345990 LARP4BQ92615 738 aaKnown RBP15.23■□□□□ 0.03
CSNK1G3-201ENST00000345990 ERCC4Q92889 916 aaPredicted RBP15.23■□□□□ 0.03
CSNK1G3-201ENST00000345990 NR1I2O75469 434 aa15.23■□□□□ 0.03
CSNK1G3-201ENST00000345990 U2AF2P26368 475 aaKnown RBP eCLIP15.23■□□□□ 0.033e-6■■■■□ 23.8
CSNK1G3-201ENST00000345990 TROAPQ12815 778 aa15.23■□□□□ 0.03
CSNK1G3-201ENST00000345990 MYOCDQ8IZQ8 938 aa15.23■□□□□ 0.03
CSNK1G3-201ENST00000345990 RNF146Q9NTX7 359 aa15.23■□□□□ 0.03
CSNK1G3-201ENST00000345990 MAP3K20Q9NYL2 800 aaKnown RBP15.23■□□□□ 0.03
CSNK1G3-201ENST00000345990 MRVI1Q9Y6F6 885 aa15.23■□□□□ 0.03
CSNK1G3-201ENST00000345990 CHGBP05060 677 aa15.22■□□□□ 0.03
CSNK1G3-201ENST00000345990 ERCC5P28715 1186 aaPredicted RBP15.22■□□□□ 0.03
CSNK1G3-201ENST00000345990 NDUFA8P51970 172 aa15.22■□□□□ 0.03
CSNK1G3-201ENST00000345990 PSMD2Q13200 908 aa15.22■□□□□ 0.03
CSNK1G3-201ENST00000345990 SNAPC2Q13487 334 aa15.22■□□□□ 0.03
CSNK1G3-201ENST00000345990 PTPN14Q15678 1187 aa15.22■□□□□ 0.03
CSNK1G3-201ENST00000345990 CCDC181Q5TID7 509 aa15.22■□□□□ 0.03
CSNK1G3-201ENST00000345990 XRRA1Q6P2D8 792 aa15.22■□□□□ 0.03
CSNK1G3-201ENST00000345990 CCDC84Q86UT8 332 aaPredicted RBP15.22■□□□□ 0.03
CSNK1G3-201ENST00000345990 GMCL1P1Q8NEA9 526 aa15.22■□□□□ 0.03
CSNK1G3-201ENST00000345990 RASGRP4Q8TDF6 673 aa15.22■□□□□ 0.03
CSNK1G3-201ENST00000345990 AIFM3Q96NN9 605 aa15.22■□□□□ 0.03
CSNK1G3-201ENST00000345990 TMEM63CQ9P1W3 806 aa15.22■□□□□ 0.03
CSNK1G3-201ENST00000345990 CTNND2Q9UQB3 1225 aa15.22■□□□□ 0.03
CSNK1G3-201ENST00000345990 GMCL1Q96IK5 515 aa15.22■□□□□ 0.03
CSNK1G3-201ENST00000345990 PHF20Q9BVI0 1012 aa15.22■□□□□ 0.03
CSNK1G3-201ENST00000345990 MRPL44Q9H9J2 332 aaKnown RBP15.22■□□□□ 0.03
CSNK1G3-201ENST00000345990 STX17P56962 302 aa15.21■□□□□ 0.03
CSNK1G3-201ENST00000345990 PPP2R3AQ06190 1150 aa15.21■□□□□ 0.03
CSNK1G3-201ENST00000345990 ALCAMQ13740 583 aa15.21■□□□□ 0.03
CSNK1G3-201ENST00000345990 KCNV1Q6PIU1 500 aa15.21■□□□□ 0.03
CSNK1G3-201ENST00000345990 RPAP3Q9H6T3 665 aaPredicted RBP15.21■□□□□ 0.03
CSNK1G3-201ENST00000345990 IMPACTQ9P2X3 320 aa15.21■□□□□ 0.03
CSNK1G3-201ENST00000345990 ABT1Q9ULW3 272 aaKnown RBP15.21■□□□□ 0.03
CSNK1G3-201ENST00000345990 PHLPP2Q6ZVD8 1323 aa15.21■□□□□ 0.03
CSNK1G3-201ENST00000345990 STAT3P40763 770 aa15.21■□□□□ 0.03
CSNK1G3-201ENST00000345990 STXBP2Q15833 593 aa15.21■□□□□ 0.03
CSNK1G3-201ENST00000345990 SNRNP48Q6IEG0 339 aaKnown RBP15.21■□□□□ 0.03
CSNK1G3-201ENST00000345990 APOBEC3HQ6NTF7 200 aaKnown RBP15.21■□□□□ 0.03
CSNK1G3-201ENST00000345990 ZBTB8OSQ8IWT0 167 aa15.21■□□□□ 0.03
CSNK1G3-201ENST00000345990 TEX13BQ9BXU2 312 aa15.21■□□□□ 0.03
CSNK1G3-201ENST00000345990 TMOD1P28289 359 aa15.21■□□□□ 0.03
CSNK1G3-201ENST00000345990 UBXN1Q04323 297 aa15.21■□□□□ 0.03
CSNK1G3-201ENST00000345990 SAMD7Q7Z3H4 446 aa15.21■□□□□ 0.03
CSNK1G3-201ENST00000345990 TRERF1Q96PN7 1200 aa15.21■□□□□ 0.03
CSNK1G3-201ENST00000345990 ALS2CR12Q96Q35 445 aa15.21■□□□□ 0.03
CSNK1G3-201ENST00000345990 TMEM39BQ9GZU3 492 aa15.21■□□□□ 0.03
CSNK1G3-201ENST00000345990 PCDHB6Q9Y5E3 794 aa15.21■□□□□ 0.03
CSNK1G3-201ENST00000345990 M0QZ92 97 aa15.21■□□□□ 0.02
CSNK1G3-201ENST00000345990 RPN1P04843 607 aaKnown RBP15.21■□□□□ 0.02
CSNK1G3-201ENST00000345990 XKR9Q5GH70 373 aa15.21■□□□□ 0.02
CSNK1G3-201ENST00000345990 USP50Q70EL3 339 aaPredicted RBP15.21■□□□□ 0.02
CSNK1G3-201ENST00000345990 DAGLBQ8NCG7 672 aa15.21■□□□□ 0.02
CSNK1G3-201ENST00000345990 CPLX3Q8WVH0 158 aa15.21■□□□□ 0.02
CSNK1G3-201ENST00000345990 TBX3O15119 743 aa15.2■□□□□ 0.02
CSNK1G3-201ENST00000345990 AKR1B10O60218 316 aa15.2■□□□□ 0.02
CSNK1G3-201ENST00000345990 PSAPP07602 524 aa15.2■□□□□ 0.02
CSNK1G3-201ENST00000345990 KRT83P78385 493 aa15.2■□□□□ 0.02
CSNK1G3-201ENST00000345990 ARHGAP4P98171 946 aa15.2■□□□□ 0.02
CSNK1G3-201ENST00000345990 KRT76Q01546 638 aa15.2■□□□□ 0.02
CSNK1G3-201ENST00000345990 SEC23AQ15436 765 aa15.2■□□□□ 0.02
CSNK1G3-201ENST00000345990 ADGRA1Q86SQ6 560 aa15.2■□□□□ 0.02
CSNK1G3-201ENST00000345990 CLIC6Q96NY7 704 aa15.2■□□□□ 0.02
CSNK1G3-201ENST00000345990 FNBP1Q96RU3 617 aa15.2■□□□□ 0.02
CSNK1G3-201ENST00000345990 NOC4LQ9BVI4 516 aaKnown RBP15.2■□□□□ 0.02
CSNK1G3-201ENST00000345990 NUCKS1Q9H1E3 243 aaKnown RBP15.2■□□□□ 0.02
CSNK1G3-201ENST00000345990 METTL14Q9HCE5 456 aaKnown RBP15.2■□□□□ 0.02
CSNK1G3-201ENST00000345990 NOD1Q9Y239 953 aa15.2■□□□□ 0.02
CSNK1G3-201ENST00000345990 LUC7L2Q9Y383 392 aaKnown RBP15.2■□□□□ 0.02
CSNK1G3-201ENST00000345990 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.2■□□□□ 0.02
CSNK1G3-201ENST00000345990 SLC25A27O95847 323 aa15.2■□□□□ 0.02
CSNK1G3-201ENST00000345990 SFNP31947 248 aa15.2■□□□□ 0.02
CSNK1G3-201ENST00000345990 FAM26FQ5R3K3 315 aa15.2■□□□□ 0.02
CSNK1G3-201ENST00000345990 LDHDQ86WU2 507 aa15.2■□□□□ 0.02
CSNK1G3-201ENST00000345990 HACE1Q8IYU2 909 aa15.2■□□□□ 0.02
CSNK1G3-201ENST00000345990 PROM2Q8N271 834 aa15.2■□□□□ 0.02
CSNK1G3-201ENST00000345990 MAP7D2Q96T17 732 aa15.2■□□□□ 0.02
CSNK1G3-201ENST00000345990 CBX8Q9HC52 389 aa15.2■□□□□ 0.02
CSNK1G3-201ENST00000345990 IFNKQ9P0W0 207 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms