RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 HARSP12081 509 aaKnown RBP21.02■□□□□ 0.96
HDAC4-201ENST00000345617 TRAPPC10P48553 1259 aa21.02■□□□□ 0.96
HDAC4-201ENST00000345617 PANX2Q96RD6 677 aa21.02■□□□□ 0.96
HDAC4-201ENST00000345617 YTHDC2Q9H6S0 1430 aaKnown RBP21.02■□□□□ 0.96
HDAC4-201ENST00000345617 C8orf58Q8NAV2 365 aa21.02■□□□□ 0.96
HDAC4-201ENST00000345617 NEK9Q8TD19 979 aa21.02■□□□□ 0.96
HDAC4-201ENST00000345617 DHTKD1Q96HY7 919 aaPredicted RBP21.02■□□□□ 0.96
HDAC4-201ENST00000345617 CABP7Q86V35 215 aa21.02■□□□□ 0.95
HDAC4-201ENST00000345617 PAIP2BQ9ULR5 123 aaKnown RBP21.02■□□□□ 0.95
HDAC4-201ENST00000345617 DIS3Q9Y2L1 958 aaKnown RBP21.02■□□□□ 0.95
HDAC4-201ENST00000345617 PDE1BQ01064 536 aa21.02■□□□□ 0.95
HDAC4-201ENST00000345617 LRRC37BQ96QE4 947 aa21.02■□□□□ 0.95
HDAC4-201ENST00000345617 V9GY48 417 aaPredicted RBP21.02■□□□□ 0.95
HDAC4-201ENST00000345617 AP2B1P63010 937 aa21.01■□□□□ 0.95
HDAC4-201ENST00000345617 LAMC1P11047 1609 aa21.01■□□□□ 0.95
HDAC4-201ENST00000345617 KRT26Q7Z3Y9 468 aa21.01■□□□□ 0.95
HDAC4-201ENST00000345617 C16orf71Q8IYS4 520 aaPredicted RBP21.01■□□□□ 0.95
HDAC4-201ENST00000345617 ZC3H12CQ9C0D7 883 aaKnown RBP21.01■□□□□ 0.95
HDAC4-201ENST00000345617 TEX14Q8IWB6 1497 aa21.01■□□□□ 0.95
HDAC4-201ENST00000345617 IQANK1A0A1B0GTG1 560 aa21.01■□□□□ 0.95
HDAC4-201ENST00000345617 CPP00450 1065 aa21.01■□□□□ 0.95
HDAC4-201ENST00000345617 H2AFZP0C0S5 128 aa21.01■□□□□ 0.95
HDAC4-201ENST00000345617 H2AFVQ71UI9 128 aa21.01■□□□□ 0.95
HDAC4-201ENST00000345617 TRIML2Q8N7C3 387 aa21.01■□□□□ 0.95
HDAC4-201ENST00000345617 YWHAGP61981 247 aaKnown RBP eCLIP21■□□□□ 0.95
HDAC4-201ENST00000345617 IRX1P78414 480 aaPredicted RBP21■□□□□ 0.95
HDAC4-201ENST00000345617 ATICP31939 592 aa21■□□□□ 0.95
HDAC4-201ENST00000345617 TTLL7Q6ZT98 887 aa21■□□□□ 0.95
HDAC4-201ENST00000345617 ARHGAP26Q9UNA1 814 aa21■□□□□ 0.95
HDAC4-201ENST00000345617 NBPF20Q3BBV1 942 aa21■□□□□ 0.95
HDAC4-201ENST00000345617 ARPP21Q9UBL0 812 aaPredicted RBP21■□□□□ 0.95
HDAC4-201ENST00000345617 PA2G4Q9UQ80 394 aaKnown RBP21■□□□□ 0.95
HDAC4-201ENST00000345617 GAS7O60861 476 aa21■□□□□ 0.95
HDAC4-201ENST00000345617 FAM133BQ5BKY9 247 aaKnown RBP21■□□□□ 0.95
HDAC4-201ENST00000345617 ADCY9O60503 1353 aa21■□□□□ 0.95
HDAC4-201ENST00000345617 EXOC1LA0A1B0GW35 172 aa21■□□□□ 0.95
HDAC4-201ENST00000345617 NCAPH2Q6IBW4 605 aa21■□□□□ 0.95
HDAC4-201ENST00000345617 ARHGAP31Q2M1Z3 1444 aa21■□□□□ 0.95
HDAC4-201ENST00000345617 NNTQ13423 1086 aa21■□□□□ 0.95
HDAC4-201ENST00000345617 COL4A3BPQ9Y5P4 624 aa21■□□□□ 0.95
HDAC4-201ENST00000345617 BAZ2BQ9UIF8 2168 aaKnown RBP21■□□□□ 0.95
HDAC4-201ENST00000345617 NEK8Q86SG6 692 aa21■□□□□ 0.95
HDAC4-201ENST00000345617 FBXL13Q8NEE6 735 aa21■□□□□ 0.95
HDAC4-201ENST00000345617 RPN1P04843 607 aaKnown RBP20.99■□□□□ 0.95
HDAC4-201ENST00000345617 POLR3EQ9NVU0 708 aa20.99■□□□□ 0.95
HDAC4-201ENST00000345617 M0QZ92 97 aa20.99■□□□□ 0.95
HDAC4-201ENST00000345617 CAV1Q03135 178 aa20.99■□□□□ 0.95
HDAC4-201ENST00000345617 FSCBQ5H9T9 825 aa20.99■□□□□ 0.95
HDAC4-201ENST00000345617 GPBP1Q86WP2 473 aa20.99■□□□□ 0.95
HDAC4-201ENST00000345617 TEX11Q8IYF3 940 aa20.99■□□□□ 0.95
HDAC4-201ENST00000345617 NIP7Q9Y221 180 aaKnown RBP eCLIP20.99■□□□□ 0.95
HDAC4-201ENST00000345617 ACEP12821 1306 aa20.99■□□□□ 0.95
HDAC4-201ENST00000345617 TADA3O75528 432 aa20.99■□□□□ 0.95
HDAC4-201ENST00000345617 BRD2P25440 801 aaKnown RBP20.99■□□□□ 0.95
HDAC4-201ENST00000345617 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.99■□□□□ 0.954e-7■■■■■ 40.4
HDAC4-201ENST00000345617 RPS6KC1Q96S38 1066 aa20.99■□□□□ 0.95
HDAC4-201ENST00000345617 KIF2CQ99661 725 aa20.99■□□□□ 0.95
HDAC4-201ENST00000345617 SGK1O00141 431 aa20.99■□□□□ 0.95
HDAC4-201ENST00000345617 EHHADHQ08426 723 aa20.99■□□□□ 0.95
HDAC4-201ENST00000345617 IFNA8P32881 189 aa20.99■□□□□ 0.95
HDAC4-201ENST00000345617 SYNGAP1Q96PV0 1343 aa20.99■□□□□ 0.95
HDAC4-201ENST00000345617 CRLF3Q8IUI8 442 aa20.99■□□□□ 0.95
HDAC4-201ENST00000345617 ARMC2Q8NEN0 867 aa20.99■□□□□ 0.95
HDAC4-201ENST00000345617 ZNF148Q9UQR1 794 aa20.99■□□□□ 0.95
HDAC4-201ENST00000345617 ATP10DQ9P241 1426 aa20.99■□□□□ 0.95
HDAC4-201ENST00000345617 DCAF5Q96JK2 942 aa20.99■□□□□ 0.95
HDAC4-201ENST00000345617 HEXIM1O94992 359 aaKnown RBP20.98■□□□□ 0.95
HDAC4-201ENST00000345617 RAPH1Q70E73 1250 aa20.98■□□□□ 0.95
HDAC4-201ENST00000345617 LCA5Q86VQ0 697 aa20.98■□□□□ 0.95
HDAC4-201ENST00000345617 ZCRB1Q8TBF4 217 aaKnown RBP20.98■□□□□ 0.95
HDAC4-201ENST00000345617 SYCE1LA8MT33 242 aa20.98■□□□□ 0.95
HDAC4-201ENST00000345617 TMTC4Q5T4D3 741 aa20.98■□□□□ 0.95
HDAC4-201ENST00000345617 IGBP1P78318 339 aa20.98■□□□□ 0.95
HDAC4-201ENST00000345617 MDM2Q00987 491 aaPredicted RBP20.98■□□□□ 0.95
HDAC4-201ENST00000345617 SESTD1Q86VW0 696 aa20.98■□□□□ 0.95
HDAC4-201ENST00000345617 STAMBPL1Q96FJ0 436 aa20.98■□□□□ 0.95
HDAC4-201ENST00000345617 NLRC4Q9NPP4 1024 aa20.98■□□□□ 0.95
HDAC4-201ENST00000345617 MYO1FO00160 1098 aa20.98■□□□□ 0.95
HDAC4-201ENST00000345617 PODXLO00592 558 aa20.98■□□□□ 0.95
HDAC4-201ENST00000345617 SERPINI2O75830 405 aa20.98■□□□□ 0.95
HDAC4-201ENST00000345617 CHEK2O96017 543 aa20.98■□□□□ 0.95
HDAC4-201ENST00000345617 APOA1P02647 267 aa20.98■□□□□ 0.95
HDAC4-201ENST00000345617 EXOC3L4Q17RC7 722 aa20.98■□□□□ 0.95
HDAC4-201ENST00000345617 ZMYND12Q9H0C1 365 aa20.98■□□□□ 0.95
HDAC4-201ENST00000345617 DONSONQ9NYP3 566 aa20.98■□□□□ 0.95
HDAC4-201ENST00000345617 ADGRF5Q8IZF2 1346 aa20.98■□□□□ 0.95
HDAC4-201ENST00000345617 IRS4O14654 1257 aaPredicted RBP20.98■□□□□ 0.95
HDAC4-201ENST00000345617 TRPA1O75762 1119 aa20.98■□□□□ 0.95
HDAC4-201ENST00000345617 MRFAP1Q9Y605 127 aa20.98■□□□□ 0.95
HDAC4-201ENST00000345617 TNNC2P02585 160 aa20.98■□□□□ 0.95
HDAC4-201ENST00000345617 NCOA5Q9HCD5 579 aaKnown RBP20.98■□□□□ 0.95
HDAC4-201ENST00000345617 CAPN9O14815 690 aa20.98■□□□□ 0.95
HDAC4-201ENST00000345617 KRT10P13645 584 aa20.98■□□□□ 0.95
HDAC4-201ENST00000345617 CADPS2Q86UW7 1296 aa20.98■□□□□ 0.95
HDAC4-201ENST00000345617 CEP70Q8NHQ1 597 aa20.98■□□□□ 0.95
HDAC4-201ENST00000345617 PHKBQ93100 1093 aa20.98■□□□□ 0.95
HDAC4-201ENST00000345617 PARP10Q53GL7 1025 aa20.97■□□□□ 0.95
HDAC4-201ENST00000345617 PANK4Q9NVE7 773 aa20.97■□□□□ 0.95
HDAC4-201ENST00000345617 ZNF518AQ6AHZ1 1483 aa20.97■□□□□ 0.95
HDAC4-201ENST00000345617 ESRRAP11474 423 aaPredicted RBP20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms