RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 DUOX2Q9NRD8 1548 aa13.2□□□□□ -0.3
COL12A1-202ENST00000345356 MGEA5O60502 916 aa13.19□□□□□ -0.3
COL12A1-202ENST00000345356 PLA2G4AP47712 749 aa13.19□□□□□ -0.3
COL12A1-202ENST00000345356 CCDC92Q53HC0 331 aaPredicted RBP13.19□□□□□ -0.3
COL12A1-202ENST00000345356 MYCT1Q8N699 235 aa13.19□□□□□ -0.3
COL12A1-202ENST00000345356 FANCBQ8NB91 859 aa13.19□□□□□ -0.3
COL12A1-202ENST00000345356 RSAD2Q8WXG1 361 aa13.19□□□□□ -0.3
COL12A1-202ENST00000345356 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.19□□□□□ -0.3
COL12A1-202ENST00000345356 ABHD10Q9NUJ1 306 aa13.19□□□□□ -0.3
COL12A1-202ENST00000345356 PTPRTO14522 1441 aa13.19□□□□□ -0.3
COL12A1-202ENST00000345356 RNMTO43148 476 aaKnown RBP13.19□□□□□ -0.3
COL12A1-202ENST00000345356 GCKRQ14397 625 aa13.19□□□□□ -0.3
COL12A1-202ENST00000345356 CYP4F22Q6NT55 531 aa13.19□□□□□ -0.3
COL12A1-202ENST00000345356 MYO1FO00160 1098 aa13.19□□□□□ -0.3
COL12A1-202ENST00000345356 FGAP02671 866 aa13.19□□□□□ -0.3
COL12A1-202ENST00000345356 PDZD8Q8NEN9 1154 aa13.19□□□□□ -0.3
COL12A1-202ENST00000345356 HAUS7Q99871 368 aa13.19□□□□□ -0.3
COL12A1-202ENST00000345356 PITPNM3Q9BZ71 974 aa13.19□□□□□ -0.3
COL12A1-202ENST00000345356 MRPL46Q9H2W6 279 aaKnown RBP13.19□□□□□ -0.3
COL12A1-202ENST00000345356 PPP1R37O75864 691 aa13.19□□□□□ -0.3
COL12A1-202ENST00000345356 APOEP02649 317 aa13.19□□□□□ -0.3
COL12A1-202ENST00000345356 TECP42680 631 aa13.19□□□□□ -0.3
COL12A1-202ENST00000345356 ZNF473Q8WTR7 871 aaKnown RBP13.19□□□□□ -0.3
COL12A1-202ENST00000345356 P2RX5Q93086 422 aa13.19□□□□□ -0.3
COL12A1-202ENST00000345356 DHTKD1Q96HY7 919 aaPredicted RBP13.19□□□□□ -0.3
COL12A1-202ENST00000345356 PLEKHF1Q96S99 279 aa13.19□□□□□ -0.3
COL12A1-202ENST00000345356 EPN3Q9H201 632 aa13.19□□□□□ -0.3
COL12A1-202ENST00000345356 VIPAS39Q9H9C1 493 aa13.19□□□□□ -0.3
COL12A1-202ENST00000345356 IFT122Q9HBG6 1241 aa13.19□□□□□ -0.3
COL12A1-202ENST00000345356 BZW2Q9Y6E2 419 aaKnown RBP13.19□□□□□ -0.3
COL12A1-202ENST00000345356 ANO9A1A5B4 782 aa13.19□□□□□ -0.3
COL12A1-202ENST00000345356 DIAPH2O60879 1101 aa13.19□□□□□ -0.3
COL12A1-202ENST00000345356 LONP1P36776 959 aaKnown RBP13.19□□□□□ -0.3
COL12A1-202ENST00000345356 RWDD2BP57060 319 aa13.19□□□□□ -0.3
COL12A1-202ENST00000345356 PPP2R5DQ14738 602 aa13.19□□□□□ -0.3
COL12A1-202ENST00000345356 GRAMD1BQ3KR37 738 aa13.19□□□□□ -0.3
COL12A1-202ENST00000345356 DZIP3Q86Y13 1208 aaKnown RBP13.19□□□□□ -0.3
COL12A1-202ENST00000345356 OGFOD1Q8N543 542 aa13.19□□□□□ -0.3
COL12A1-202ENST00000345356 GPCPD1Q9NPB8 672 aa13.19□□□□□ -0.3
COL12A1-202ENST00000345356 DCTN3O75935 186 aa13.18□□□□□ -0.3
COL12A1-202ENST00000345356 SNX16P57768 344 aa13.18□□□□□ -0.3
COL12A1-202ENST00000345356 ESYT3A0FGR9 886 aa13.18□□□□□ -0.3
COL12A1-202ENST00000345356 BLIDQ8IZY5 108 aa13.18□□□□□ -0.3
COL12A1-202ENST00000345356 ARHGAP18Q8N392 663 aa13.18□□□□□ -0.3
COL12A1-202ENST00000345356 RDH13Q8NBN7 331 aa13.18□□□□□ -0.3
COL12A1-202ENST00000345356 OSBPL9Q96SU4 736 aa13.18□□□□□ -0.3
COL12A1-202ENST00000345356 MAP3K19Q56UN5 1328 aa13.18□□□□□ -0.3
COL12A1-202ENST00000345356 ATP5HO75947 161 aa13.18□□□□□ -0.3
COL12A1-202ENST00000345356 ARHGAP4P98171 946 aa13.18□□□□□ -0.3
COL12A1-202ENST00000345356 DR1Q01658 176 aa13.18□□□□□ -0.3
COL12A1-202ENST00000345356 TEKT1Q969V4 418 aa13.18□□□□□ -0.3
COL12A1-202ENST00000345356 CHMP6Q96FZ7 201 aa13.18□□□□□ -0.3
COL12A1-202ENST00000345356 FOXP1Q9H334 677 aaPredicted RBP13.18□□□□□ -0.3
COL12A1-202ENST00000345356 CD248Q9HCU0 757 aa13.18□□□□□ -0.3
COL12A1-202ENST00000345356 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.18□□□□□ -0.3
COL12A1-202ENST00000345356 ZNF711Q9Y462 761 aa13.18□□□□□ -0.3
COL12A1-202ENST00000345356 ADCY7P51828 1080 aa13.18□□□□□ -0.3
COL12A1-202ENST00000345356 ADAM9Q13443 819 aa13.18□□□□□ -0.3
COL12A1-202ENST00000345356 MESDQ14696 234 aa13.18□□□□□ -0.3
COL12A1-202ENST00000345356 PDCD2Q16342 344 aaPredicted RBP13.18□□□□□ -0.3
COL12A1-202ENST00000345356 GRAMD4Q6IC98 578 aa13.18□□□□□ -0.3
COL12A1-202ENST00000345356 TRIML2Q8N7C3 387 aa13.18□□□□□ -0.3
COL12A1-202ENST00000345356 MB21D1Q8N884 522 aa13.18□□□□□ -0.3
COL12A1-202ENST00000345356 DTNBP1Q96EV8 351 aa13.18□□□□□ -0.3
COL12A1-202ENST00000345356 ETNK1Q9HBU6 452 aa13.18□□□□□ -0.3
COL12A1-202ENST00000345356 RAB20Q9NX57 234 aa13.18□□□□□ -0.3
COL12A1-202ENST00000345356 ECEL1O95672 775 aa13.17□□□□□ -0.3
COL12A1-202ENST00000345356 KRT80Q6KB66 452 aa13.17□□□□□ -0.3
COL12A1-202ENST00000345356 FMR1NBQ8N0W7 255 aaPredicted RBP13.17□□□□□ -0.3
COL12A1-202ENST00000345356 RIN2Q8WYP3 895 aaPredicted RBP13.17□□□□□ -0.3
COL12A1-202ENST00000345356 ITSN2Q9NZM3 1697 aa13.17□□□□□ -0.3
COL12A1-202ENST00000345356 TARSL2A2RTX5 802 aaKnown RBP13.17□□□□□ -0.3
COL12A1-202ENST00000345356 TRIM37O94972 964 aa13.17□□□□□ -0.3
COL12A1-202ENST00000345356 ATF7P17544 494 aaPredicted RBP13.17□□□□□ -0.3
COL12A1-202ENST00000345356 CUL3Q13618 768 aa13.17□□□□□ -0.3
COL12A1-202ENST00000345356 GPBP1Q86WP2 473 aa13.17□□□□□ -0.3
COL12A1-202ENST00000345356 CCT8L2Q96SF2 557 aa13.17□□□□□ -0.3
COL12A1-202ENST00000345356 ZNF148Q9UQR1 794 aa13.17□□□□□ -0.3
COL12A1-202ENST00000345356 STXBP3O00186 592 aa13.17□□□□□ -0.3
COL12A1-202ENST00000345356 GYG2O15488 501 aa13.17□□□□□ -0.3
COL12A1-202ENST00000345356 SPAG7O75391 227 aa13.17□□□□□ -0.3
COL12A1-202ENST00000345356 NECTIN1Q15223 517 aa13.17□□□□□ -0.3
COL12A1-202ENST00000345356 MAN2A1Q16706 1144 aa13.17□□□□□ -0.3
COL12A1-202ENST00000345356 EXOC3L4Q17RC7 722 aa13.17□□□□□ -0.3
COL12A1-202ENST00000345356 TAB3Q8N5C8 712 aaPredicted RBP13.17□□□□□ -0.3
COL12A1-202ENST00000345356 FAM89AQ96GI7 184 aa13.17□□□□□ -0.3
COL12A1-202ENST00000345356 FHOD1Q9Y613 1164 aa13.17□□□□□ -0.3
COL12A1-202ENST00000345356 SNX1Q13596 522 aa13.17□□□□□ -0.3
COL12A1-202ENST00000345356 FAM47EQ6ZV65 393 aa13.17□□□□□ -0.3
COL12A1-202ENST00000345356 OSCARQ8IYS5 282 aa13.17□□□□□ -0.3
COL12A1-202ENST00000345356 PLBD2Q8NHP8 589 aa13.17□□□□□ -0.3
COL12A1-202ENST00000345356 IRX2Q9BZI1 471 aaPredicted RBP13.17□□□□□ -0.3
COL12A1-202ENST00000345356 NT5C3AQ9H0P0 336 aa13.17□□□□□ -0.3
COL12A1-202ENST00000345356 PANK4Q9NVE7 773 aa13.17□□□□□ -0.3
COL12A1-202ENST00000345356 WDR91A4D1P6 747 aa13.16□□□□□ -0.3
COL12A1-202ENST00000345356 KCNJ6P48051 423 aa13.16□□□□□ -0.3
COL12A1-202ENST00000345356 MAEAQ7L5Y9 396 aa13.16□□□□□ -0.3
COL12A1-202ENST00000345356 SH2D3CQ8N5H7 860 aa13.16□□□□□ -0.3
COL12A1-202ENST00000345356 N4BP1O75113 896 aaKnown RBP13.16□□□□□ -0.3
COL12A1-202ENST00000345356 ITGA6P23229 1130 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms